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MS001191 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001191
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPolynucleotide adenylyltransferase
Genome locationscaffold36:2182677..2182935
RNA-Seq ExpressionMS001191
SyntenyMS001191
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065055.1 nuclear poly(A) polymerase 4 isoform X3 [Cucumis melo var. makuwa]1.5e-0753.73Show/hide
Query:  LQY--GNPRESCCKKNMNKCMRCFEDSGALYVRCLVL-LSQLPISKRREIVCEETAHEVVSGTNLFY
        LQY  G    S  +K + +CM+CFE+SGAL+ RCL    SQLPI +R EI+CE TA  VVSG N  Y
Subjt:  LQY--GNPRESCCKKNMNKCMRCFEDSGALYVRCLVL-LSQLPISKRREIVCEETAHEVVSGTNLFY
KGN62795.1 hypothetical protein Csa_022232 [Cucumis sativus]3.3e-1859.3Show/hide
Query:  GIRFSSNMLFVALQYGNPRESCCKKNMNKCMRCFEDSGALYVRCLVL-LSQLPISKRREIVCEETAHEVVSGTNLFYTFE-INLTV
        GI FSSNMLF+ L +GNP++ C  KN+  CM+CFE+SGA + RCL L  SQLPI +R EI+CE TAH VVSG N  YT +  NL V
Subjt:  GIRFSSNMLFVALQYGNPRESCCKKNMNKCMRCFEDSGALYVRCLVL-LSQLPISKRREIVCEETAHEVVSGTNLFYTFE-INLTV
TrEMBL top hitse value%identityAlignment
A0A0A0LLH3 Uncharacterized protein1.6e-1859.3Show/hide
Query:  GIRFSSNMLFVALQYGNPRESCCKKNMNKCMRCFEDSGALYVRCLVL-LSQLPISKRREIVCEETAHEVVSGTNLFYTFE-INLTV
        GI FSSNMLF+ L +GNP++ C  KN+  CM+CFE+SGA + RCL L  SQLPI +R EI+CE TAH VVSG N  YT +  NL V
Subjt:  GIRFSSNMLFVALQYGNPRESCCKKNMNKCMRCFEDSGALYVRCLVL-LSQLPISKRREIVCEETAHEVVSGTNLFYTFE-INLTV
A0A5A7VGN2 Polynucleotide adenylyltransferase7.3e-0853.73Show/hide
Query:  LQY--GNPRESCCKKNMNKCMRCFEDSGALYVRCLVL-LSQLPISKRREIVCEETAHEVVSGTNLFY
        LQY  G    S  +K + +CM+CFE+SGAL+ RCL    SQLPI +R EI+CE TA  VVSG N  Y
Subjt:  LQY--GNPRESCCKKNMNKCMRCFEDSGALYVRCLVL-LSQLPISKRREIVCEETAHEVVSGTNLFY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAGGCATACGGTTCAGTTCCAACATGCTGTTTGTTGCCCTTCAATATGGGAATCCGAGGGAGAGCTGTTGTAAAAAAAACATGAACAAATGCATGCGATGCTTTGAAGA
TTCTGGTGCATTATATGTTAGATGCCTGGTGTTGCTGTCACAGCTTCCCATTTCTAAAAGGCGGGAGATTGTTTGTGAAGAAACTGCTCATGAGGTCGTTTCTGGGACGA
ATCTTTTCTACACTTTTGAGATCAATCTTACAGTT
mRNA sequenceShow/hide mRNA sequence
CAAGGCATACGGTTCAGTTCCAACATGCTGTTTGTTGCCCTTCAATATGGGAATCCGAGGGAGAGCTGTTGTAAAAAAAACATGAACAAATGCATGCGATGCTTTGAAGA
TTCTGGTGCATTATATGTTAGATGCCTGGTGTTGCTGTCACAGCTTCCCATTTCTAAAAGGCGGGAGATTGTTTGTGAAGAAACTGCTCATGAGGTCGTTTCTGGGACGA
ATCTTTTCTACACTTTTGAGATCAATCTTACAGTT
Protein sequenceShow/hide protein sequence
QGIRFSSNMLFVALQYGNPRESCCKKNMNKCMRCFEDSGALYVRCLVLLSQLPISKRREIVCEETAHEVVSGTNLFYTFEINLTV