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MS001199 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001199
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1677)
Genome locationscaffold36:2236015..2236930
RNA-Seq ExpressionMS001199
SyntenyMS001199
Gene Ontology termsNA
InterPro domainsIPR012876 - Protein of unknown function DUF1677, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598770.1 hypothetical protein SDJN03_08548, partial [Cucurbita argyrosperma subsp. sororia]8.8e-5570.48Show/hide
Query:  LSMEAGLQLQRTISDISSELTKEGVGGKLP--AISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACAR
        LSME    LQRTISDISSELTK G+    P   ISEVEAA C+CCGLSEECT EYI R+R +FMG ++CGLCA AVNEEM K+G K+EE+LK HMNACA+
Subjt:  LSMEAGLQLQRTISDISSELTKEGVGGKLP--AISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACAR

Query:  FNRIGRAYPILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK
        FNR GR YP+LYQAE IKEILKKSS+R     PRE+  GHR+ RIGRTSSCIPAITRDV DP +VK
Subjt:  FNRIGRAYPILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK

XP_008445002.1 PREDICTED: uncharacterized protein LOC103488172 isoform X1 [Cucumis melo]9.7e-5468.64Show/hide
Query:  SPMLSMEAGLQLQRTISDISSELTKE-----GVGGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNH
        S +LSME    LQRTISDIS ELTKE     G    LP ISEVEAAAC+CCGLSE+CT EYI R++ KFMG LICGLCA AVNEEMEKKG KREEALK H
Subjt:  SPMLSMEAGLQLQRTISDISSELTKE-----GVGGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNH

Query:  MNACARFNRIGRAYPILYQAEGIKEILKK---SSSRPRESIVGHRSNRIGRTSSCIPAITRDVRDPKMV
        M+ACA+FNRIGR YP+LYQAE IK+ILKK   S+   + ++  HR  RIGRTSSCIPA+TRD+ DP MV
Subjt:  MNACARFNRIGRAYPILYQAEGIKEILKK---SSSRPRESIVGHRSNRIGRTSSCIPAITRDVRDPKMV

XP_022961690.1 uncharacterized protein LOC111462383 [Cucurbita moschata]1.5e-5471.52Show/hide
Query:  LQRTISDISSELTKEGV--GGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACARFNRIGRAY
        LQRTISDISSELTK G+     LP ISEVE A C+CCGLSEECT EYI R+R +FMG +ICGLCA AVNEEM K+G K+EE+L  HMNACA+FNR GR Y
Subjt:  LQRTISDISSELTKEGV--GGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACARFNRIGRAY

Query:  PILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK
        P+LYQAE IKEILKKSS+R     PRE+  GHR+ RIGRTSSCIPAITRDV DP +VK
Subjt:  PILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK

XP_022996579.1 uncharacterized protein LOC111491777 [Cucurbita maxima]2.5e-5469.88Show/hide
Query:  LSMEAGLQLQRTISDISSELTKEGV--GGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACAR
        LSME    LQRTISDISSELTK G+     LP ISEVEAA C+CCGLSEECT EYI R+R +FMG +ICGLCA AVNEEM K+G ++EE+LK HM+ACA+
Subjt:  LSMEAGLQLQRTISDISSELTKEGV--GGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACAR

Query:  FNRIGRAYPILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK
        FNR GR YP+LYQAE IKEILKKSS+R     PRE   GHR+ RIGRTSSCIPAIT+DV DP +VK
Subjt:  FNRIGRAYPILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK

XP_023547063.1 uncharacterized protein LOC111805983 [Cucurbita pepo subsp. pepo]6.1e-5671.69Show/hide
Query:  LSMEAGLQLQRTISDISSELTKEGV--GGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACAR
        LSME    LQRTISDISSELTK G+     LP ISEVEAA C+CCGLSEECT EYI R+R +FMG +ICGLCA AVNEEM K+G K+EE+LK HMNACA+
Subjt:  LSMEAGLQLQRTISDISSELTKEGV--GGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACAR

Query:  FNRIGRAYPILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK
        FNR GR YP+LYQAE IKEILKKSS+R     PRE+  GHR+ RIGRTSSCIPAITRDV DP +VK
Subjt:  FNRIGRAYPILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK

TrEMBL top hitse value%identityAlignment
A0A0A0LLX3 Uncharacterized protein1.3e-5169.87Show/hide
Query:  LQRTISDISSELTKEGVG-----GKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACARFNRIG
        LQRTISDIS EL+KEG+G       LP ISEVEAAAC+CCGLSE+CT EYI  ++ KFMG LICGLCA AVNEEMEK G KREEALK HM+ACA+FNRIG
Subjt:  LQRTISDISSELTKEGVG-----GKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACARFNRIG

Query:  RAYPILYQAEGIKEILKKSSSRPRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK
        R YP+LYQAE IK+ILKK+ S        HR  RIGR+SSCIPA+ RDV DP MVK
Subjt:  RAYPILYQAEGIKEILKKSSSRPRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK

A0A1S3BBP3 uncharacterized protein LOC103488172 isoform X14.7e-5468.64Show/hide
Query:  SPMLSMEAGLQLQRTISDISSELTKE-----GVGGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNH
        S +LSME    LQRTISDIS ELTKE     G    LP ISEVEAAAC+CCGLSE+CT EYI R++ KFMG LICGLCA AVNEEMEKKG KREEALK H
Subjt:  SPMLSMEAGLQLQRTISDISSELTKE-----GVGGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNH

Query:  MNACARFNRIGRAYPILYQAEGIKEILKK---SSSRPRESIVGHRSNRIGRTSSCIPAITRDVRDPKMV
        M+ACA+FNRIGR YP+LYQAE IK+ILKK   S+   + ++  HR  RIGRTSSCIPA+TRD+ DP MV
Subjt:  MNACARFNRIGRAYPILYQAEGIKEILKK---SSSRPRESIVGHRSNRIGRTSSCIPAITRDVRDPKMV

A0A1S4DW91 uncharacterized protein LOC103488172 isoform X24.4e-5268.05Show/hide
Query:  SPMLSMEAGLQLQRTISDISSELTKE-----GVGGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNH
        S +LSME    LQRTISDIS ELTKE     G    LP ISEVEAAAC+CCGLSE+CT EYI R++ KFMG LICGLCA AVNEEME KG KREEALK H
Subjt:  SPMLSMEAGLQLQRTISDISSELTKE-----GVGGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNH

Query:  MNACARFNRIGRAYPILYQAEGIKEILKK---SSSRPRESIVGHRSNRIGRTSSCIPAITRDVRDPKMV
        M+ACA+FNRIGR YP+LYQAE IK+ILKK   S+   + ++  HR  RIGRTSSCIPA+TRD+ DP MV
Subjt:  MNACARFNRIGRAYPILYQAEGIKEILKK---SSSRPRESIVGHRSNRIGRTSSCIPAITRDVRDPKMV

A0A6J1HD09 uncharacterized protein LOC1114623837.2e-5571.52Show/hide
Query:  LQRTISDISSELTKEGV--GGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACARFNRIGRAY
        LQRTISDISSELTK G+     LP ISEVE A C+CCGLSEECT EYI R+R +FMG +ICGLCA AVNEEM K+G K+EE+L  HMNACA+FNR GR Y
Subjt:  LQRTISDISSELTKEGV--GGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACARFNRIGRAY

Query:  PILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK
        P+LYQAE IKEILKKSS+R     PRE+  GHR+ RIGRTSSCIPAITRDV DP +VK
Subjt:  PILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK

A0A6J1K942 uncharacterized protein LOC1114917771.2e-5469.88Show/hide
Query:  LSMEAGLQLQRTISDISSELTKEGV--GGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACAR
        LSME    LQRTISDISSELTK G+     LP ISEVEAA C+CCGLSEECT EYI R+R +FMG +ICGLCA AVNEEM K+G ++EE+LK HM+ACA+
Subjt:  LSMEAGLQLQRTISDISSELTKEGV--GGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACAR

Query:  FNRIGRAYPILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK
        FNR GR YP+LYQAE IKEILKKSS+R     PRE   GHR+ RIGRTSSCIPAIT+DV DP +VK
Subjt:  FNRIGRAYPILYQAEGIKEILKKSSSR-----PRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72510.1 Protein of unknown function (DUF1677)5.0e-1636.09Show/hide
Query:  EVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEM--EKKGLKREEALKNHMNACARFNRIG-RAYPILYQAEGIKEILKKSSSRPR---
        E ++  CDCCGL+EECT  YI  +R ++MG  ICGLC+ AV  E+   K+ L  EEA+  HMN C +F        P  +    +++IL+KS   PR   
Subjt:  EVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEM--EKKGLKREEALKNHMNACARFNRIG-RAYPILYQAEGIKEILKKSSSRPR---

Query:  -------ESIVGHR----SNRIGRTSSCIPAIT
               +    H     SN + R+ SC  ++T
Subjt:  -------ESIVGHR----SNRIGRTSSCIPAIT

AT1G79770.1 Protein of unknown function (DUF1677)1.5e-3352.38Show/hide
Query:  LQRTISDISSELTKEGVGGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKK---GLKREEALKNHMNACARFNRIGRA
        L R++SDIS +  +E   G L  I EVE A C+CCG+ EECT EYI R+R KF G  ICGLC+ AV EE +K+   GL  E ALK HM+AC RFN++GR 
Subjt:  LQRTISDISSELTKEGVGGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKK---GLKREEALKNHMNACARFNRIGRA

Query:  YPILYQAEGIKEILKKSSSRPRESIVGHRSNRIGRTSSCIPAITRDV
        YP L+QA+ ++++L++S+    +SI+   +  I RTSSCIPAITRD+
Subjt:  YPILYQAEGIKEILKKSSSRPRESIVGHRSNRIGRTSSCIPAITRDV

AT2G25780.1 Protein of unknown function (DUF1677)1.7e-1634.87Show/hide
Query:  MEAGLQLQRTISDISSELTK---EGVGGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKK---GLKREEALKNHMNAC
        M  G  L++  SD+S E  +   +    +     EV    CDCCG+ EECT +YIA++R+ + GN +CGLC   V E + K        +EA   H   C
Subjt:  MEAGLQLQRTISDISSELTK---EGVGGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKK---GLKREEALKNHMNAC

Query:  ARFNRIGRAYPILYQAEGIKEILKKSSSRPRESIVGHRSNRIGRTSSCIPAI
          FN   R  P L     ++EI K+SS     S     S +I RT SC P +
Subjt:  ARFNRIGRAYPILYQAEGIKEILKKSSSRPRESIVGHRSNRIGRTSSCIPAI

AT4G14819.1 Protein of unknown function (DUF1677)1.7e-1638.1Show/hide
Query:  EVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACARFNRIGRAYPILYQAEGIKEILKKSSSR--PRESIV
        E+E+  C+CCGL E+CT  YI++++  F G  +CGLC+ AV++E  +     EEA+  HM+ C +FN    A P    A+G++++L++ S    P+ S  
Subjt:  EVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACARFNRIGRAYPILYQAEGIKEILKKSSSR--PRESIV

Query:  GHRSN
          RSN
Subjt:  GHRSN

AT5G25840.1 Protein of unknown function (DUF1677)9.4e-3949.41Show/hide
Query:  LQRTISDISSELTKEGVGGKLP-------------AISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKG-------LKREEA
        LQRTISDIS +++ +    K P             AISEVE A C+CCG+SEECTPEYI R+R KF G LICGLC  AV  EMEK          +REEA
Subjt:  LQRTISDISSELTKEGVGGKLP-------------AISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKG-------LKREEA

Query:  LKNHMNACARFNRIGRAYPILYQAEGIKEILKKSSSRPRESIVGHRSNRIGRTSSCIPAITRDVRDPKMV
        +K HM+AC+RFNR+GR+YP+LYQAE +KE+LKK S +   +    +   + R+SSC+PA+ ++++D  +V
Subjt:  LKNHMNACARFNRIGRAYPILYQAEGIKEILKKSSSRPRESIVGHRSNRIGRTSSCIPAITRDVRDPKMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGAGTCTTCCTTCGATCATATTTCTTCACCGATGCTATCAATGGAGGCCGGACTCCAACTCCAACGAACCATATCGGACATCTCGTCGGAGCTAACCAAAGAGGGCGT
CGGAGGGAAGCTTCCGGCGATCTCGGAGGTGGAGGCCGCTGCCTGCGACTGCTGTGGCCTGTCGGAGGAGTGCACACCGGAGTACATCGCCCGGCTCCGACACAAGTTCA
TGGGAAACCTCATATGCGGACTCTGCGCCGCCGCGGTCAACGAGGAAATGGAAAAGAAGGGGTTAAAGAGAGAGGAGGCTTTAAAAAATCACATGAATGCGTGCGCACGG
TTCAATCGGATTGGGAGGGCATATCCAATTTTGTATCAGGCAGAGGGTATTAAAGAGATTTTGAAGAAAAGCTCGAGCCGACCTCGAGAGAGCATCGTTGGGCACCGAAG
CAATAGGATTGGACGGACCTCCAGTTGCATTCCAGCCATCACTAGGGATGTTCGTGATCCAAAAATGGTCAAG
mRNA sequenceShow/hide mRNA sequence
ATTGAGTCTTCCTTCGATCATATTTCTTCACCGATGCTATCAATGGAGGCCGGACTCCAACTCCAACGAACCATATCGGACATCTCGTCGGAGCTAACCAAAGAGGGCGT
CGGAGGGAAGCTTCCGGCGATCTCGGAGGTGGAGGCCGCTGCCTGCGACTGCTGTGGCCTGTCGGAGGAGTGCACACCGGAGTACATCGCCCGGCTCCGACACAAGTTCA
TGGGAAACCTCATATGCGGACTCTGCGCCGCCGCGGTCAACGAGGAAATGGAAAAGAAGGGGTTAAAGAGAGAGGAGGCTTTAAAAAATCACATGAATGCGTGCGCACGG
TTCAATCGGATTGGGAGGGCATATCCAATTTTGTATCAGGCAGAGGGTATTAAAGAGATTTTGAAGAAAAGCTCGAGCCGACCTCGAGAGAGCATCGTTGGGCACCGAAG
CAATAGGATTGGACGGACCTCCAGTTGCATTCCAGCCATCACTAGGGATGTTCGTGATCCAAAAATGGTCAAG
Protein sequenceShow/hide protein sequence
IESSFDHISSPMLSMEAGLQLQRTISDISSELTKEGVGGKLPAISEVEAAACDCCGLSEECTPEYIARLRHKFMGNLICGLCAAAVNEEMEKKGLKREEALKNHMNACAR
FNRIGRAYPILYQAEGIKEILKKSSSRPRESIVGHRSNRIGRTSSCIPAITRDVRDPKMVK