CuGenDBv2

Gene ID	MS001213
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Methionine--tRNA ligase
Genome location	scaffold36:2329520..2332843
RNA-Seq Expression	MS001213
Synteny	MS001213
Gene Ontology terms	GO:0006486 - protein glycosylation (biological process) GO:0000139 - Golgi membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004150287.1 uncharacterized protein LOC101205851 isoform X2 [Cucumis sativus]

5.7e-69

78.37

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Query:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSI-GSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTT-TTKVREKKVYNLAGQKYDPPE
        MV++ K T+SKLKP   DGGSRLKLESSD+K+KI+SS K+SI  SK KS S++ K+EVKSK  SSSSKTT+KTTTTTT T KVREKKV+NL GQKYDPPE
Subjt:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSI-GSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTT-TTKVREKKVYNLAGQKYDPPE

Query:  EREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVK--SPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFI
        EREPLRIFYESLSKQIP SEMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTP+K  S K  S+PESSQ+ Q  SKNGD+KAKKKI NDS +DDDFI
Subjt:  EREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVK--SPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFI

Query:  LSPKRRKM
        LSPKRRKM
Subjt:  LSPKRRKM

XP_008445018.1 PREDICTED: uncharacterized protein LOC103488185 isoform X1 [Cucumis melo]

4.4e-69

78.37

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Query:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSI-GSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTT-TTKVREKKVYNLAGQKYDPPE
        MV++ K T+SKLKP   DGGSRLKLESSD+K+KI+SS K+SI  SK KS S++ KSEVKSK  SSSSKTT+KTTTTTT T KVREKK++NL GQKYDPPE
Subjt:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSI-GSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTT-TTKVREKKVYNLAGQKYDPPE

Query:  EREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVK--SPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFI
        EREPLRIFYESLSKQIP SEMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTP+K  S K  S+PESSQ+ Q  SKNGD+KAKKKI NDS +DDDFI
Subjt:  EREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVK--SPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFI

Query:  LSPKRRKM
        LSPKRRKM
Subjt:  LSPKRRKM

XP_022132016.1 uncharacterized protein LOC111004987 isoform X1 [Momordica charantia]

9.3e-96

99.51

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Query:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSK-TTTTTTTTKVREKKVYNLAGQKYDPPEE
        MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSK TTTTTTTTKVREKKVYNLAGQKYDPPEE
Subjt:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSK-TTTTTTTTKVREKKVYNLAGQKYDPPEE

Query:  REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP
        REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP
Subjt:  REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

XP_022132017.1 uncharacterized protein LOC111004987 isoform X2 [Momordica charantia]

2.5e-93

98.54

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Query:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSK-TTTTTTTTKVREKKVYNLAGQKYDPPEE
        MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSE  SKITSSSSKTTSK TTTTTTTTKVREKKVYNLAGQKYDPPEE
Subjt:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSK-TTTTTTTTKVREKKVYNLAGQKYDPPEE

Query:  REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP
        REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP
Subjt:  REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

XP_038885128.1 uncharacterized protein LOC120075630 isoform X1 [Benincasa hispida]

1.5e-74

80.98

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Query:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSI-GSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTTTTKVREKKVYNLAGQKYDPPEE
        MV+++KPT+SKLKP   DGGSRLKLESSD+K+KI+SS K+SI  SK KS S++ KSEVKSK  SSSSKTT+KTTTTTTT KVREKKV+NL GQKYDPPEE
Subjt:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSI-GSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTTTTKVREKKVYNLAGQKYDPPEE

Query:  REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP
        REPLRIFYESLSKQIP SEMAEFWMMEHGMLSPEKAK+AY+KKLRRQKEQRTGTP+KS K PS+PESSQK Q  SKNGD+KAKKKI NDS +DDDFILSP
Subjt:  REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLY4 Uncharacterized protein

2.8e-69

78.37

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Query:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSI-GSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTT-TTKVREKKVYNLAGQKYDPPE
        MV++ K T+SKLKP   DGGSRLKLESSD+K+KI+SS K+SI  SK KS S++ K+EVKSK  SSSSKTT+KTTTTTT T KVREKKV+NL GQKYDPPE
Subjt:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSI-GSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTT-TTKVREKKVYNLAGQKYDPPE

Query:  EREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVK--SPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFI
        EREPLRIFYESLSKQIP SEMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTP+K  S K  S+PESSQ+ Q  SKNGD+KAKKKI NDS +DDDFI
Subjt:  EREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVK--SPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFI

Query:  LSPKRRKM
        LSPKRRKM
Subjt:  LSPKRRKM

A0A1S3BCG5 uncharacterized protein LOC103488185 isoform X1

2.1e-69

78.37

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Query:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSI-GSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTT-TTKVREKKVYNLAGQKYDPPE
        MV++ K T+SKLKP   DGGSRLKLESSD+K+KI+SS K+SI  SK KS S++ KSEVKSK  SSSSKTT+KTTTTTT T KVREKK++NL GQKYDPPE
Subjt:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSI-GSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTT-TTKVREKKVYNLAGQKYDPPE

Query:  EREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVK--SPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFI
        EREPLRIFYESLSKQIP SEMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTP+K  S K  S+PESSQ+ Q  SKNGD+KAKKKI NDS +DDDFI
Subjt:  EREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVK--SPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFI

Query:  LSPKRRKM
        LSPKRRKM
Subjt:  LSPKRRKM

A0A6J1BR23 uncharacterized protein LOC111004987 isoform X1

4.5e-96

99.51

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Query:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSK-TTTTTTTTKVREKKVYNLAGQKYDPPEE
        MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSK TTTTTTTTKVREKKVYNLAGQKYDPPEE
Subjt:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSK-TTTTTTTTKVREKKVYNLAGQKYDPPEE

Query:  REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP
        REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP
Subjt:  REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

A0A6J1BSP0 uncharacterized protein LOC111004987 isoform X2

1.2e-93

98.54

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Query:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSK-TTTTTTTTKVREKKVYNLAGQKYDPPEE
        MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSE  SKITSSSSKTTSK TTTTTTTTKVREKKVYNLAGQKYDPPEE
Subjt:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSK-TTTTTTTTKVREKKVYNLAGQKYDPPEE

Query:  REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP
        REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP
Subjt:  REPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

A0A6J1GJC9 uncharacterized protein LOC111454380 isoform X1

6.2e-69

78.54

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Query:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTTTTKVREKKVYNLAGQKYDPPEER
        MV++ KPTVSK+K G+QDGGSRLKLESSDNK+    +  S   SK KS SVL KSEVKSK  +SSSKTT+K   TT+T KVREKKV+NLAGQKYDPPEER
Subjt:  MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTTTTKVREKKVYNLAGQKYDPPEER

Query:  EPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDD-DFILSP
        EPLRIFYESLSKQI TSEMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTP+KS K PS+PESSQ+ Q  SKNGDLKAKKKITN+S +DD DFILSP
Subjt:  EPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDD-DFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G19990.1 unknown protein

6.8e-20

37.99

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Query:  AETKPTVSKLKPGNQDGGSRLKLESS----DNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSS-----SKTTSKTTTTTTTTKVREKKVYNLAGQK
        A+ KPT      GN  G  +LK E +    D+ + I+SS   S     K    + K + K  ++  +     SK   K        K RE+KVY+L GQK
Subjt:  AETKPTVSKLKPGNQDGGSRLKLESS----DNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSS-----SKTTSKTTTTTTTTKVREKKVYNLAGQK

Query:  YDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKS-------------------PKLPSKPESSQKQQMSS
         + P+ER+PLRIFYESL KQIPTS+MA+ W+ME G+L  EKAK+  EKKL  QK  +  +PVKS                    K PS+  S++K+   S
Subjt:  YDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKS-------------------PKLPSKPESSQKQQMSS

Query:  KNGDLKAKKKITNDSSEDDDFILSPKRRK
        K    K +KK ++D   DDDF+ S   +K
Subjt:  KNGDLKAKKKITNDSSEDDDFILSPKRRK

AT5G11600.1 unknown protein

2.9e-39

49.59

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Query:  MVAETKPTVSKLKPGNQDG--GSRLKLESS-DNKRKIESSTKSSIG-SKPKS--ASVLIKSEVKSKITSSSSKTTSKT----------------------
        M  + +P+ +K +P +      SR+K++ S  +K+KI +S++  +  SKP+S  ++V  KSE K K+  +S KT + T                      
Subjt:  MVAETKPTVSKLKPGNQDG--GSRLKLESS-DNKRKIESSTKSSIG-SKPKS--ASVLIKSEVKSKITSSSSKTTSKT----------------------

Query:  --TTTTTTTKV-----REKKVYNLAGQKYDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKS-PKLPSKP
          TT+ T + V     REKKVY+LAGQK+DPPEEREPLRIFYESLSKQIP SEMAEFW+MEHGMLSPEKAKRA+EKK R+ K+ R GTP KS P   SK 
Subjt:  --TTTTTTTKV-----REKKVYNLAGQKYDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKS-PKLPSKP

Query:  ESSQKQQMSSKNG-DLKAKKKIT-NDSSEDDDFILSPKRRKM
        ESSQ+   S  NG D + KKK+  +D  +DDDFILS KRRK+
Subjt:  ESSQKQQMSSKNG-DLKAKKKIT-NDSSEDDDFILSPKRRKM

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTTGCAGAGACCAAACCCACTGTTTCAAAGCTCAAACCCGGTAATCAAGATGGCGGCTCCAGATTAAAGCTCGAATCCTCCGACAATAAGAGGAAGATTGAGAGCTC
CACCAAGAGCTCAATTGGTTCCAAACCGAAATCCGCGTCTGTTCTTATCAAATCCGAGGTAAAGTCAAAGATAACATCAAGTTCTTCAAAAACGACATCAAAAACTACTA
CTACTACTACTACTACTAAAGTTAGAGAAAAGAAAGTGTACAATTTGGCTGGTCAGAAATATGATCCTCCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAGTCCTTG
TCAAAACAGATACCAACAAGTGAAATGGCAGAGTTTTGGATGATGGAGCACGGCATGTTATCTCCCGAAAAGGCAAAAAGGGCGTACGAGAAGAAACTGAGAAGACAAAA
GGAACAGCGGACGGGGACTCCAGTTAAATCACCAAAACTGCCAAGCAAACCAGAGAGTTCACAGAAGCAGCAGATGTCATCAAAGAATGGTGATCTAAAAGCCAAGAAAA
AGATCACAAACGACAGCAGCGAAGACGACGACTTCATTTTAAGCCCCAAGAGAAGGAAAATG

mRNA sequence

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Protein sequence

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MVAETKPTVSKLKPGNQDGGSRLKLESSDNKRKIESSTKSSIGSKPKSASVLIKSEVKSKITSSSSKTTSKTTTTTTTTKVREKKVYNLAGQKYDPPEEREPLRIFYESL
SKQIPTSEMAEFWMMEHGMLSPEKAKRAYEKKLRRQKEQRTGTPVKSPKLPSKPESSQKQQMSSKNGDLKAKKKITNDSSEDDDFILSPKRRKM

MS001213 (gene) of Bitter gourd (TR) v1 genome