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MS001238 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001238
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionchaperone protein dnaJ-related
Genome locationscaffold36:2574416..2575819
RNA-Seq ExpressionMS001238
SyntenyMS001238
Gene Ontology termsNA
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131716.1 uncharacterized protein LOC111004819 isoform X1 [Momordica charantia]2.0e-5597.25Show/hide
Query:  MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
        MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
Subjt:  MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF

Query:  PNFSDGSDL
        PNFSDG+ +
Subjt:  PNFSDGSDL
XP_022131717.1 uncharacterized protein LOC111004819 isoform X2 [Momordica charantia]4.4e-55100Show/hide
Query:  MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
        MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
Subjt:  MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF

Query:  PNFSDG
        PNFSDG
Subjt:  PNFSDG
XP_022962550.1 uncharacterized protein LOC111462947 [Cucurbita moschata]4.8e-4682.88Show/hide
Query:  ISMALTKINLLRFPP--SSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
        I+M LTKINL+R  P  S+SSRSSF P RCSS+QQVQ+  DSTIACEPCNG+GWIVCDFC+GQKTNVKAENNR+YRRCPSCRAVGYVLCSKCKVFKCVTF
Subjt:  ISMALTKINLLRFPP--SSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF

Query:  PNFSDGSDLSF
        PN+SDG DLSF
Subjt:  PNFSDGSDLSF
XP_022996808.1 uncharacterized protein LOC111491935 [Cucurbita maxima]1.1e-4582.88Show/hide
Query:  ISMALTKINLLRFPP--SSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
        I+M LTKINL+R  P  SSSSRSS  P RCSS+QQVQ+  DSTIACEPCNG+GWIVCDFC+GQKTNVKAENNR+YRRCPSCRAVGYVLCSKCKVFKCVTF
Subjt:  ISMALTKINLLRFPP--SSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF

Query:  PNFSDGSDLSF
        PN+SDG DLSF
Subjt:  PNFSDGSDLSF
XP_038885868.1 uncharacterized protein LOC120076171 [Benincasa hispida]1.6e-4481.08Show/hide
Query:  ISMALTKINLLRFPPS--SSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
        I++ LT+INL+R  PS  SSSRSSF   RCSS+QQVQ+  DSTIACEPCNG+GWIVCDFC+GQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
Subjt:  ISMALTKINLLRFPPS--SSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF

Query:  PNFSDGSDLSF
        PN+SDG++LSF
Subjt:  PNFSDGSDLSF
TrEMBL top hitse value%identityAlignment
A0A1S3BCN0 uncharacterized protein LOC103488212 isoform X19.8e-4581.98Show/hide
Query:  ISMALTKINLLRFPP--SSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
        I+  LTKINL+ F P  SSSSRSSF  ARCS +QQVQ+  DSTI CEPCNG+GWIVCDFC+GQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
Subjt:  ISMALTKINLLRFPP--SSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF

Query:  PNFSDGSDLSF
        PNF+DG+DLSF
Subjt:  PNFSDGSDLSF
A0A6J1BQ99 uncharacterized protein LOC111004819 isoform X19.5e-5697.25Show/hide
Query:  MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
        MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
Subjt:  MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF

Query:  PNFSDGSDL
        PNFSDG+ +
Subjt:  PNFSDGSDL
A0A6J1BRT7 uncharacterized protein LOC111004819 isoform X22.1e-55100Show/hide
Query:  MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
        MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
Subjt:  MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF

Query:  PNFSDG
        PNFSDG
Subjt:  PNFSDG
A0A6J1HFF6 uncharacterized protein LOC1114629472.3e-4682.88Show/hide
Query:  ISMALTKINLLRFPP--SSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
        I+M LTKINL+R  P  S+SSRSSF P RCSS+QQVQ+  DSTIACEPCNG+GWIVCDFC+GQKTNVKAENNR+YRRCPSCRAVGYVLCSKCKVFKCVTF
Subjt:  ISMALTKINLLRFPP--SSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF

Query:  PNFSDGSDLSF
        PN+SDG DLSF
Subjt:  PNFSDGSDLSF
A0A6J1K9Q6 uncharacterized protein LOC1114919355.2e-4682.88Show/hide
Query:  ISMALTKINLLRFPP--SSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF
        I+M LTKINL+R  P  SSSSRSS  P RCSS+QQVQ+  DSTIACEPCNG+GWIVCDFC+GQKTNVKAENNR+YRRCPSCRAVGYVLCSKCKVFKCVTF
Subjt:  ISMALTKINLLRFPP--SSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTF

Query:  PNFSDGSDLSF
        PN+SDG DLSF
Subjt:  PNFSDGSDLSF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24395.1 chaperone protein dnaJ-related1.2e-3462.04Show/hide
Query:  PPSSSSRSS----FKPARCSSLQQVQLQAD--------STIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTFPNF
        P SS+SR      FKP RC  LQ+ + Q D        + I CE CNG+GW++CDFCKGQKTNVK+ENNRIYRRCP+C+AVG+VLC KCKVFKCVTFPN 
Subjt:  PPSSSSRSS----FKPARCSSLQQVQLQAD--------STIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTFPNF

Query:  SDGSDLSF
         DG +L F
Subjt:  SDGSDLSF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTTCTATGGCTCTTACGAAGATCAACCTCCTCCGATTTCCTCCATCGTCTTCCTCCCGCTCTTCCTTCAAGCCTGCGCGCTGCTCATCTCTCCAACAGGTTCA
ATTACAGGCTGACTCAACAATTGCATGTGAACCTTGTAACGGTGAAGGATGGATAGTGTGTGATTTCTGTAAAGGGCAGAAGACTAACGTGAAGGCCGAGAACAATCGTA
TCTACCGACGATGTCCATCTTGCAGAGCCGTCGGATATGTTCTATGTTCAAAGTGCAAGGTGTTCAAGTGTGTCACTTTCCCAAACTTCAGTGACGGTTCTGATCTATCC
TTC
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTTCTATGGCTCTTACGAAGATCAACCTCCTCCGATTTCCTCCATCGTCTTCCTCCCGCTCTTCCTTCAAGCCTGCGCGCTGCTCATCTCTCCAACAGGTTCA
ATTACAGGCTGACTCAACAATTGCATGTGAACCTTGTAACGGTGAAGGATGGATAGTGTGTGATTTCTGTAAAGGGCAGAAGACTAACGTGAAGGCCGAGAACAATCGTA
TCTACCGACGATGTCCATCTTGCAGAGCCGTCGGATATGTTCTATGTTCAAAGTGCAAGGTGTTCAAGTGTGTCACTTTCCCAAACTTCAGTGACGGTTCTGATCTATCC
TTC
Protein sequenceShow/hide protein sequence
MAISMALTKINLLRFPPSSSSRSSFKPARCSSLQQVQLQADSTIACEPCNGEGWIVCDFCKGQKTNVKAENNRIYRRCPSCRAVGYVLCSKCKVFKCVTFPNFSDGSDLS
F