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MS001247 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001247
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold36:2644801..2645165
RNA-Seq ExpressionMS001247
SyntenyMS001247
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]2.9e-0435.96Show/hide
Query:  GKQIPTLSEKCTWITSYAEKARLTTISSNTNLLPRCESHRRFDNRLWLPL--IPILLNVDAACGGHQSGTGLRAIITDPDGRILAAHSSFLEVSFSPLLV
        G  + T + +C WI+SY +    +    N  + P+  S      R WLP     + +N DAAC    + TGL  II D  G +L A S FL +  +PL  
Subjt:  GKQIPTLSEKCTWITSYAEKARLTTISSNTNLLPRCESHRRFDNRLWLPL--IPILLNVDAACGGHQSGTGLRAIITDPDGRILAAHSSFLEVSFSPLLV

Query:  EICAILECLRFAKS
        EI  ILE L+ A S
Subjt:  EICAILECLRFAKS
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.0e-0635.65Show/hide
Query:  IVLGKQIPTLSEKCTWITSYAEKARLTTISSNTNLLPRCESHRRFDNRLWLP--LIPILLNVDAACGGHQSGTGLRAIITDPDGRILAAHSSFLEVSFSP
        ++ GKQ+  +  KC W+T + +      +S   N  PR +S+ R   + W P   + + LN DAAC G  + T    II D    ++AA S  +    SP
Subjt:  IVLGKQIPTLSEKCTWITSYAEKARLTTISSNTNLLPRCESHRRFDNRLWLP--LIPILLNVDAACGGHQSGTGLRAIITDPDGRILAAHSSFLEVSFSP

Query:  LLVEICAILECLRFA
        LL EI  ILE L+FA
Subjt:  LLVEICAILECLRFA
TrEMBL top hitse value%identityAlignment
A0A6J1BQ49 uncharacterized protein LOC1110047861.4e-0435.96Show/hide
Query:  GKQIPTLSEKCTWITSYAEKARLTTISSNTNLLPRCESHRRFDNRLWLPL--IPILLNVDAACGGHQSGTGLRAIITDPDGRILAAHSSFLEVSFSPLLV
        G  + T + +C WI+SY +    +    N  + P+  S      R WLP     + +N DAAC    + TGL  II D  G +L A S FL +  +PL  
Subjt:  GKQIPTLSEKCTWITSYAEKARLTTISSNTNLLPRCESHRRFDNRLWLPL--IPILLNVDAACGGHQSGTGLRAIITDPDGRILAAHSSFLEVSFSPLLV

Query:  EICAILECLRFAKS
        EI  ILE L+ A S
Subjt:  EICAILECLRFAKS
A0A6J1DX30 uncharacterized protein LOC1110248742.0e-0635.65Show/hide
Query:  IVLGKQIPTLSEKCTWITSYAEKARLTTISSNTNLLPRCESHRRFDNRLWLP--LIPILLNVDAACGGHQSGTGLRAIITDPDGRILAAHSSFLEVSFSP
        ++ GKQ+  +  KC W+T + +      +S   N  PR +S+ R   + W P   + + LN DAAC G  + T    II D    ++AA S  +    SP
Subjt:  IVLGKQIPTLSEKCTWITSYAEKARLTTISSNTNLLPRCESHRRFDNRLWLP--LIPILLNVDAACGGHQSGTGLRAIITDPDGRILAAHSSFLEVSFSP

Query:  LLVEICAILECLRFA
        LL EI  ILE L+FA
Subjt:  LLVEICAILECLRFA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGACAATTTGGAATGATTGTTCTTGGGAAACAAATTCCAACTTTATCAGAGAAGTGTACTTGGATTACCTCTTATGCTGAGAAGGCTCGTTTGACTACAATTTCTTCCAA
CACAAATTTGTTGCCTCGTTGTGAATCTCATCGCCGGTTTGATAATCGACTTTGGCTTCCCCTTATACCGATTCTCCTCAACGTAGATGCGGCTTGTGGTGGGCATCAAT
CAGGAACAGGTCTACGAGCGATTATTACGGATCCTGATGGAAGAATTTTGGCCGCCCATTCCAGTTTCCTCGAGGTCTCCTTCAGTCCTCTCCTTGTTGAAATTTGCGCA
ATCCTCGAGTGCCTACGATTTGCTAAATCT
mRNA sequenceShow/hide mRNA sequence
CGACAATTTGGAATGATTGTTCTTGGGAAACAAATTCCAACTTTATCAGAGAAGTGTACTTGGATTACCTCTTATGCTGAGAAGGCTCGTTTGACTACAATTTCTTCCAA
CACAAATTTGTTGCCTCGTTGTGAATCTCATCGCCGGTTTGATAATCGACTTTGGCTTCCCCTTATACCGATTCTCCTCAACGTAGATGCGGCTTGTGGTGGGCATCAAT
CAGGAACAGGTCTACGAGCGATTATTACGGATCCTGATGGAAGAATTTTGGCCGCCCATTCCAGTTTCCTCGAGGTCTCCTTCAGTCCTCTCCTTGTTGAAATTTGCGCA
ATCCTCGAGTGCCTACGATTTGCTAAATCT
Protein sequenceShow/hide protein sequence
RQFGMIVLGKQIPTLSEKCTWITSYAEKARLTTISSNTNLLPRCESHRRFDNRLWLPLIPILLNVDAACGGHQSGTGLRAIITDPDGRILAAHSSFLEVSFSPLLVEICA
ILECLRFAKS