; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001261 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001261
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionflowering-promoting factor 1-like
Genome locationscaffold36:2738958..2739287
RNA-Seq ExpressionMS001261
SyntenyMS001261
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652180.1 hypothetical protein Csa_021977 [Cucumis sativus]1.4e-5392.79Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRR KVLIHLPTGQPV+SYSSLE ILT+LGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNS+HMYDIVI
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI

Query:  KNPNLFHVRDM
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDM

XP_004138764.1 flowering-promoting factor 1 [Cucumis sativus]4.8e-5493.69Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRR KVLIHLPTGQPV+SYSSLE ILT+LGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNS+HMYDIVI
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI

Query:  KNPNLFHVRDM
        KNPNLFHVRDM
Subjt:  KNPNLFHVRDM

XP_022132061.1 flowering-promoting factor 1-like [Momordica charantia]2.1e-57100Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK
        MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK

Query:  NPNLFHVRDM
        NPNLFHVRDM
Subjt:  NPNLFHVRDM

XP_022950996.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]2.8e-5493.64Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRRKVLI+LPTGQ VSSYSSLEEILT+LGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK

Query:  NPNLFHVRDM
        NPNLFHVRD+
Subjt:  NPNLFHVRDM

XP_023546289.1 flowering-promoting factor 1-like [Cucurbita pepo subsp. pepo]1.2e-5290.91Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRRKVLI+LPTGQ VSSYS L+EILT+LGWERYYGGDP+LFQFHKRSSIDLISLP+D+AKFNSVHMYDIVIK
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK

Query:  NPNLFHVRDM
        NPNLFHVRD+
Subjt:  NPNLFHVRDM

TrEMBL top hitse value%identityAlignment
A0A0A0LPY7 Uncharacterized protein2.3e-5493.69Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRR KVLIHLPTGQPV+SYSSLE ILT+LGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNS+HMYDIVI
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI

Query:  KNPNLFHVRDM
        KNPNLFHVRDM
Subjt:  KNPNLFHVRDM

A0A5A7VCS2 Flowering-promoting factor 12.3e-5493.69Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRR KVLIHLPTGQPV+SYSSLE ILT+LGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNS+HMYDIVI
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI

Query:  KNPNLFHVRDM
        KNPNLFHVRDM
Subjt:  KNPNLFHVRDM

A0A6J1BR67 flowering-promoting factor 1-like1.0e-57100Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK
        MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK

Query:  NPNLFHVRDM
        NPNLFHVRDM
Subjt:  NPNLFHVRDM

A0A6J1GGC5 flowering-promoting factor 1-like protein 21.4e-5493.64Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRRKVLI+LPTGQ VSSYSSLEEILT+LGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK

Query:  NPNLFHVRDM
        NPNLFHVRD+
Subjt:  NPNLFHVRDM

A0A6J1KTX8 flowering-promoting factor 1-like protein 21.4e-5493.64Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRRKVLI+LPTGQ VSSYSSLEEILT+LGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK

Query:  NPNLFHVRDM
        NPNLFHVRD+
Subjt:  NPNLFHVRDM

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 12.5e-4274.77Show/hide
Query:  MSGVWVFKNGIIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIV
        MSGVWVFKNG+IRL+ENP Q+ SD +   +RRKV+++LPTG+ VSSYS+LE+IL +LGWERY+ GGD DL QFHKRSSIDLISLPRDF KFNSV+MYDIV
Subjt:  MSGVWVFKNGIIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIV

Query:  IKNPNLFHVRD
        +KNPN FHVRD
Subjt:  IKNPNLFHVRD

O24340 Flowering-promoting factor 15.7e-4272.73Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI
        MSGVWVFKNG+IRL+ENP  +  G   NSRRKV+++LPTG+ +SSYS+LE+IL +LGWERY+ GGD DL QFHKRSSIDLISLP+DF KF+SV+MYDIV+
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Q5Q0B3 Flowering-promoting factor 1-like protein 17.7e-3964.52Show/hide
Query:  MSGVWVF-KNGIIRLIENPQADSDGRLGNS-----------RRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGD--PDLFQFHKRSSIDLISLPRDF
        MSGVWVF KNG++RL+ENP   S G    S           RRK+L+HLP+ + VSSY SLE+IL  LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGIIRLIENPQADSDGRLGNS-----------RRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGD--PDLFQFHKRSSIDLISLPRDF

Query:  AKFNSVHMYDIVIKNPNLFHVRDM
        +KFNS+HMYDIV+KNPN+FHVRDM
Subjt:  AKFNSVHMYDIVIKNPNLFHVRDM

Q9LGE3 Flowering-promoting factor 1-like protein 14.7e-3665.14Show/hide
Query:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK
        MSGVWVFKNG++RL+E  QA +   +   RRK L+H P+GQ VSSY++LE  LTALGWERYY  DP LFQFHKR S+DLISLP DF+ F+SVHMYDIV+K
Subjt:  MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIK

Query:  NPNLFHVRD
        N + F V D
Subjt:  NPNLFHVRD

Q9LXB5 Flowering-promoting factor 1-like protein 24.3e-4271.82Show/hide
Query:  MSGVWVFKNGIIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI
        MSGVWVF NG+IRL+ENP Q+       + RR VL++LPTG+ VSSYSSLE+IL +LGWERY+ GD DL Q+HKRSSIDLISLPRDF+KFNSV+MYDIV+
Subjt:  MSGVWVFKNGIIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 15.5e-4064.52Show/hide
Query:  MSGVWVF-KNGIIRLIENPQADSDGRLGNS-----------RRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGD--PDLFQFHKRSSIDLISLPRDF
        MSGVWVF KNG++RL+ENP   S G    S           RRK+L+HLP+ + VSSY SLE+IL  LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGIIRLIENPQADSDGRLGNS-----------RRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGD--PDLFQFHKRSSIDLISLPRDF

Query:  AKFNSVHMYDIVIKNPNLFHVRDM
        +KFNS+HMYDIV+KNPN+FHVRDM
Subjt:  AKFNSVHMYDIVIKNPNLFHVRDM

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)3.1e-4371.82Show/hide
Query:  MSGVWVFKNGIIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI
        MSGVWVF NG+IRL+ENP Q+       + RR VL++LPTG+ VSSYSSLE+IL +LGWERY+ GD DL Q+HKRSSIDLISLPRDF+KFNSV+MYDIV+
Subjt:  MSGVWVFKNGIIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

AT5G24860.1 flowering promoting factor 11.8e-4374.77Show/hide
Query:  MSGVWVFKNGIIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIV
        MSGVWVFKNG+IRL+ENP Q+ SD +   +RRKV+++LPTG+ VSSYS+LE+IL +LGWERY+ GGD DL QFHKRSSIDLISLPRDF KFNSV+MYDIV
Subjt:  MSGVWVFKNGIIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIV

Query:  IKNPNLFHVRD
        +KNPN FHVRD
Subjt:  IKNPNLFHVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGGGTTTGGGTTTTCAAGAATGGTATAATTCGTCTGATTGAAAATCCTCAAGCGGATTCTGATGGAAGGCTAGGCAACTCAAGGCGAAAGGTATTGATACACCT
ACCGACGGGCCAGCCCGTGTCATCCTACTCCTCCCTCGAGGAAATCCTCACAGCCTTGGGATGGGAGAGGTACTATGGAGGCGATCCAGACCTGTTCCAGTTTCATAAAC
GCTCCTCCATTGACCTTATTTCTCTCCCGAGGGACTTCGCCAAGTTCAACTCCGTTCACATGTACGACATAGTCATTAAAAATCCCAATCTTTTCCACGTTCGAGATATG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGGGTTTGGGTTTTCAAGAATGGTATAATTCGTCTGATTGAAAATCCTCAAGCGGATTCTGATGGAAGGCTAGGCAACTCAAGGCGAAAGGTATTGATACACCT
ACCGACGGGCCAGCCCGTGTCATCCTACTCCTCCCTCGAGGAAATCCTCACAGCCTTGGGATGGGAGAGGTACTATGGAGGCGATCCAGACCTGTTCCAGTTTCATAAAC
GCTCCTCCATTGACCTTATTTCTCTCCCGAGGGACTTCGCCAAGTTCAACTCCGTTCACATGTACGACATAGTCATTAAAAATCCCAATCTTTTCCACGTTCGAGATATG
Protein sequenceShow/hide protein sequence
MSGVWVFKNGIIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTALGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSVHMYDIVIKNPNLFHVRDM