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MS001262 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001262
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNA helicase
Genome locationscaffold36:2748275..2748429
RNA-Seq ExpressionMS001262
SyntenyMS001262
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:0140657 - ATP-dependent activity (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461142.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo]8.0e-0458.62Show/hide
Query:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
        MDVQMKDEK++EEED+                KI   KGKASAL+E+LEKSRLAEAKP
Subjt:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
XP_022148436.1 DEAD-box ATP-dependent RNA helicase 35 [Momordica charantia]3.6e-0460.34Show/hide
Query:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
        MDVQMKDEKN+EEED                 KI   KGKASAL+E+LEKSRLAEAKP
Subjt:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
XP_038885065.1 DEAD-box ATP-dependent RNA helicase 35 [Benincasa hispida]2.7e-0458.62Show/hide
Query:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
        MDVQMKDEK++EEED+                KI  +KGKASAL+E+LEKSRLAEAKP
Subjt:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
TrEMBL top hitse value%identityAlignment
A0A0A0K6A2 RNA helicase3.9e-0456.25Show/hide
Query:  QRRDFEMDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
        QR    MDVQMKDEK++EEED                 KI   KGKASAL+E+LEKSRLAEAKP
Subjt:  QRRDFEMDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
A0A1S3CDK5 RNA helicase3.9e-0458.62Show/hide
Query:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
        MDVQMKDEK++EEED+                KI   KGKASAL+E+LEKSRLAEAKP
Subjt:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
A0A5A7UYT9 RNA helicase3.9e-0458.62Show/hide
Query:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
        MDVQMKDEK++EEED+                KI   KGKASAL+E+LEKSRLAEAKP
Subjt:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
A0A6J1D5D5 RNA helicase1.7e-0460.34Show/hide
Query:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
        MDVQMKDEKN+EEED                 KI   KGKASAL+E+LEKSRLAEAKP
Subjt:  MDVQMKDEKNMEEEDNV-------------ESKIFPYKGKASALDEKLEKSRLAEAKP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGAGAAGGGATTTTGAGATGGATGTACAAATGAAGGACGAAAAGAACATGGAAGAGGAAGATAATGTTGAATCTAAGATTTTTCCGTACAAGGGAAAGGCTTCTGCCCT
TGACGAAAAGTTGGAGAAATCAAGGCTTGCTGAAGCCAAGCCC
mRNA sequenceShow/hide mRNA sequence
CAGAGAAGGGATTTTGAGATGGATGTACAAATGAAGGACGAAAAGAACATGGAAGAGGAAGATAATGTTGAATCTAAGATTTTTCCGTACAAGGGAAAGGCTTCTGCCCT
TGACGAAAAGTTGGAGAAATCAAGGCTTGCTGAAGCCAAGCCC
Protein sequenceShow/hide protein sequence
QRRDFEMDVQMKDEKNMEEEDNVESKIFPYKGKASALDEKLEKSRLAEAKP