; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001264 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001264
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionselenoprotein H
Genome locationscaffold36:2753748..2756814
RNA-Seq ExpressionMS001264
SyntenyMS001264
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR011893 - Selenoprotein, Rdx-type
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132303.1 uncharacterized protein LOC111005187 [Momordica charantia]7.0e-8797.8Show/hide
Query:  MAPKKRTAKQEDEP--AAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVI
        MAPKKRTAKQEDEP  AAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVI
Subjt:  MAPKKRTAKQEDEP--AAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVI

Query:  EHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
        EHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSG GEKFISLLDMKRPFTRMKELDMGKVIS+IVEKIKG
Subjt:  EHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
XP_022950994.1 selenoprotein H-like isoform X1 [Cucurbita moschata]5.8e-5775.54Show/hide
Query:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPE----LPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV
        MAPKKR+  QEDE    A AKP P SSRVTR S RLA NSKA   V E    LP RKK KR  KENGK  AEEVE E E+++  AASEKLG E A NR V
Subjt:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPE----LPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV

Query:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
        VIEHCKQCQSFKKRA+EVQNGLE GVPGITVL+NPDKPRRGCFEIRS DGEKFISLLDMKRPFTRMKELDM +VISDI+EKIKG
Subjt:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
XP_023002520.1 selenoprotein H-like isoform X1 [Cucurbita maxima]2.9e-5675Show/hide
Query:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAG----GPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV
        MAPKKR+  QEDE    AAAKP P SSRVTR S RLAANSKA      PV +LP +KK KRA KEN K  AEEVE E E+++  AASEKLG E A NR V
Subjt:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAG----GPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV

Query:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
        VIEHCKQCQSFKKRA+EVQNGLE GVPGITVL+NPDK RRGCFEIRS DGEKFISLLDMKRPFT+MKELDM +VISDI+EKIKG
Subjt:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
XP_023536837.1 selenoprotein H-like [Cucurbita pepo subsp. pepo]8.1e-5977.17Show/hide
Query:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAG----GPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV
        MAPKKR+  QEDE    AAAKP P SSR TR S RLAANSKA      PV +LP RKK KRA KENGK  AEEVE E E+++  AASEKLG E A NR V
Subjt:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAG----GPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV

Query:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
        VIEHCKQCQSFKKRAIEVQNGLE GVPGITVL+NPDKPRRGCFEIRS DGEKFISLLDMKRPFTRMKELDM +VISDI+EKIKG
Subjt:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
XP_038886764.1 selenoprotein H [Benincasa hispida]8.3e-5673.37Show/hide
Query:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVR----KKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV
        MAP+KR+  QEDEP   AA K AP SSRVTRSSARLAANSKA   V E        KK KRA KENGK +    E E E VEV AA EKL  +D  NRTV
Subjt:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVR----KKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV

Query:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
        VIEHCKQCQSFKKRAI+VQNGLE GVPGITV++NPD PRRGCFEIRS DGEKFISLLDMKRPFTRMKELDM +VISDI+EKIKG
Subjt:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
TrEMBL top hitse value%identityAlignment
A0A0A0LPC9 Uncharacterized protein2.0e-5572.22Show/hide
Query:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEH
        MAP+KRT  QE++       KPAP +SR+TRSSARLAANSKA   V ELP  KK KRA KENGK   EEVE ++ +V+VG    KL  +DA +RTVVIEH
Subjt:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEH

Query:  CKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
        CKQCQSFKKRAI+VQ GLE GVPGITVL+NPDKPRRGCFEIRS DGEKFISLLDMKRPFTRMKEL+M +VISDI+EKIKG
Subjt:  CKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
A0A1S3BBW1 selenoprotein H4.0e-5672.78Show/hide
Query:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEH
        MAP+KR+  QE+E   +A  KPAP +SRVTRSSARLAANSKA   V ELP  KK KRA KENGK E    E E +EV+V    EK   +DA +RTVVIEH
Subjt:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEH

Query:  CKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
        CKQCQSFKKRAI+VQ GLE GVPGITVL+NPDKPRRGCFEIRS DG+KFISLLDMKRPFTRMKELDM +VISDI+EKIKG
Subjt:  CKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
A0A6J1BVW4 uncharacterized protein LOC1110051873.4e-8797.8Show/hide
Query:  MAPKKRTAKQEDEP--AAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVI
        MAPKKRTAKQEDEP  AAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVI
Subjt:  MAPKKRTAKQEDEP--AAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVI

Query:  EHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
        EHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSG GEKFISLLDMKRPFTRMKELDMGKVIS+IVEKIKG
Subjt:  EHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
A0A6J1GHF7 selenoprotein H-like isoform X12.8e-5775.54Show/hide
Query:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPE----LPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV
        MAPKKR+  QEDE    A AKP P SSRVTR S RLA NSKA   V E    LP RKK KR  KENGK  AEEVE E E+++  AASEKLG E A NR V
Subjt:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPE----LPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV

Query:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
        VIEHCKQCQSFKKRA+EVQNGLE GVPGITVL+NPDKPRRGCFEIRS DGEKFISLLDMKRPFTRMKELDM +VISDI+EKIKG
Subjt:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
A0A6J1KP64 selenoprotein H-like isoform X11.4e-5675Show/hide
Query:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAG----GPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV
        MAPKKR+  QEDE    AAAKP P SSRVTR S RLAANSKA      PV +LP +KK KRA KEN K  AEEVE E E+++  AASEKLG E A NR V
Subjt:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAG----GPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTV

Query:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
        VIEHCKQCQSFKKRA+EVQNGLE GVPGITVL+NPDK RRGCFEIRS DGEKFISLLDMKRPFT+MKELDM +VISDI+EKIKG
Subjt:  VIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG
SwissProt top hitse value%identityAlignment
Q3UQA7 Selenoprotein H3.1e-0543.14Show/hide
Query:  AMNRTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEI
        A   TVVIEHC   + + + A  +   L+   P + V VNP KPRRG FE+
Subjt:  AMNRTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEI
Q4R5Y4 Selenoprotein H3.1e-0539.73Show/hide
Query:  KEEVEVGAASEKL-----GGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEI
        K E  + AA+EK       GE     TVVIEHC   + +   A  +   L    P + V VNP KPRRG FE+
Subjt:  KEEVEVGAASEKL-----GGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEI
Q8IZQ5 Selenoprotein H4.8e-0639.24Show/hide
Query:  PEAEEVETEKEEVEVGAASEKL--GGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEI
        P   + + E   V V    EKL  GGE     TVVIEHC   + + + A  +   L    P + V VNP KPRRG FE+
Subjt:  PEAEEVETEKEEVEVGAASEKL--GGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEI
Arabidopsis top hitse value%identityAlignment
AT2G24440.1 selenium binding6.2e-3351.08Show/hide
Query:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKR-------AQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMN
        MA KK     E +  A A  +   +  R TRS  +   +S     + E P +KK K        A K+  K E   V+ EKEE E   A+EK   +D+  
Subjt:  MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKR-------AQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMN

Query:  RTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIK
        + +VIEHCKQC+SFK+RA EV+ GLE  VPGI V VNPDKPRRGCFEIR   GE FISLL MKRPFT MKEL+M +VI+DIVEKIK
Subjt:  RTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIK
AT4G31360.1 selenium binding3.1e-3248.45Show/hide
Query:  MAPKKRTAKQEDEPAAAAAAKPAPT--SSRVTRS------SARLAANSKAGGPVPELPVRKKPKR-------AQKENGKPEAEEVETEKEEVEVGAASEK
        M PKK  A  E++      AKP  T  SSRVTRS      S      +KA G   + P  KK KR        + + GK E EEVE  +E VE     E+
Subjt:  MAPKKRTAKQEDEPAAAAAAKPAPT--SSRVTRS------SARLAANSKAGGPVPELPVRKKPKR-------AQKENGKPEAEEVETEKEEVEVGAASEK

Query:  LGGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIK
           ED     +VIEHCKQC +FK RAI+V+  LE  VPG+TV +NP+KPRRGCFEIR   G+ FISLL+MKRPF  MK LDM +VI DI++K+K
Subjt:  LGGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGAAGAAGCGAACAGCGAAGCAAGAAGATGAGCCGGCGGCGGCGGCGGCAGCCAAGCCTGCTCCGACGTCATCGAGGGTAACCCGGAGTTCGGCCCGGCTGGC
GGCGAACTCGAAGGCCGGTGGGCCTGTGCCGGAGTTGCCGGTGAGGAAGAAGCCGAAGCGTGCTCAGAAGGAAAATGGGAAGCCGGAGGCGGAGGAGGTCGAGACTGAGA
AAGAGGAAGTGGAAGTTGGTGCTGCTTCGGAGAAACTTGGCGGCGAGGATGCGATGAACAGAACCGTTGTGATTGAACATTGCAAACAGTGCCAATCGTTCAAGAAAAGG
GCCATCGAGGTGCAGAATGGTCTAGAGACTGGTGTTCCTGGCATCACTGTGCTGGTCAACCCTGATAAGCCAAGAAGAGGATGCTTTGAAATACGGAGTGGAGATGGCGA
GAAGTTTATCAGCCTTCTGGACATGAAGCGACCGTTTACTCGTATGAAGGAGCTCGACATGGGGAAAGTAATTTCGGATATTGTTGAGAAGATAAAAGGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCGAAGAAGCGAACAGCGAAGCAAGAAGATGAGCCGGCGGCGGCGGCGGCAGCCAAGCCTGCTCCGACGTCATCGAGGGTAACCCGGAGTTCGGCCCGGCTGGC
GGCGAACTCGAAGGCCGGTGGGCCTGTGCCGGAGTTGCCGGTGAGGAAGAAGCCGAAGCGTGCTCAGAAGGAAAATGGGAAGCCGGAGGCGGAGGAGGTCGAGACTGAGA
AAGAGGAAGTGGAAGTTGGTGCTGCTTCGGAGAAACTTGGCGGCGAGGATGCGATGAACAGAACCGTTGTGATTGAACATTGCAAACAGTGCCAATCGTTCAAGAAAAGG
GCCATCGAGGTGCAGAATGGTCTAGAGACTGGTGTTCCTGGCATCACTGTGCTGGTCAACCCTGATAAGCCAAGAAGAGGATGCTTTGAAATACGGAGTGGAGATGGCGA
GAAGTTTATCAGCCTTCTGGACATGAAGCGACCGTTTACTCGTATGAAGGAGCTCGACATGGGGAAAGTAATTTCGGATATTGTTGAGAAGATAAAAGGA
Protein sequenceShow/hide protein sequence
MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKR
AIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG