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MS001276 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001276
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
Genome locationscaffold36:2885763..2885924
RNA-Seq ExpressionMS001276
SyntenyMS001276
Gene Ontology termsGO:0009536 - plastid (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJS52315.1 NADH-plastoquinone oxidoreductase subunit 5 [Indofevillea khasiana]2.4e-0662.9Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMWSFPSVLL SIVMI           SNYIYQYV SW INNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

YP_009456109.1 NADH dehydrogenase subunit 5 [Momordica charantia]2.4e-0662.9Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMWSFPSVLL SIVMI           SNYIYQYV SW INNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

YP_009738250.1 NADH dehydrogenase subunit 5 [Siraitia siamensis]2.4e-0662.9Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMWSFPSVLL SIVMI           SNYIYQYV SW INNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

YP_009751868.1 NADH dehydrogenase subunit F [Indofevillea khasiana]2.4e-0662.9Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMWSFPSVLL SIVMI           SNYIYQYV SW INNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

YP_009753931.1 NADH dehydrogenase subunit F [Trichosanthes lobata]2.4e-0662.9Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMWSFPSVLL SIVMI           S+YIYQYV SWIINNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

TrEMBL top hitse value%identityAlignment
A0A2I6C056 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.1e-0662.9Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMWSFPSVLL SIVMI           SNYIYQYV SW INNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

A0A6C0UCC8 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.1e-0662.9Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMWSFPSVLL SIVMI           SNYIYQYV SW INNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

A0A6H0EQP7 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.1e-0662.9Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMWSFPSVLL SIVMI           SNYIYQYV SW INNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

A0A6H0EWF8 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.1e-0662.9Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMWSFPSVLL SIVMI           S+YIYQYV SWIINNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

A0A6M4SQ01 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.1e-0662.9Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMWSFPSVLL SIVMI           SNYIYQYV SW INNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

SwissProt top hitse value%identityAlignment
A0A382 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.7e-0759.68Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMWSF SVLL +IVMI           SN IYQYV SWIINNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

Q2QD43 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic7.7e-0856.45Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+R+WSFPS+LL SIVMI           ++YIYQYV SW INNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

Q32539 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic7.7e-0858.06Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+G+GLLL       L+RMWSF SVLL SIVMI           S+Y+YQYV SWIINNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

Q9MVL6 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (Fragment)2.9e-0753.23Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+G+GLLL       L+RMW+FP++LL SIVMI            +YIYQYV SW INNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

Q9TLA3 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic3.8e-0756.45Show/hide
Query:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS
        L+GVGLLL       L+RMW+FPS+LL SIVMI           S+ IYQYV SW INNDFS
Subjt:  LLGVGLLL-------LQRMWSFPSVLLFSIVMI-----------SNYIYQYVCSWIINNDFS

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATACCTTTCATCTCACTTCCAATTTTTATCTGTTAGGAGTGGGACTTCTACTTCTTCAACGTATGTGGTCTTTCCCGAGTGTTTTATTGTTTAGTATAGTTATGATTAG
TAATTATATCTATCAATATGTATGTTCTTGGATTATCAATAATGACTTTTCT
mRNA sequenceShow/hide mRNA sequence
CATACCTTTCATCTCACTTCCAATTTTTATCTGTTAGGAGTGGGACTTCTACTTCTTCAACGTATGTGGTCTTTCCCGAGTGTTTTATTGTTTAGTATAGTTATGATTAG
TAATTATATCTATCAATATGTATGTTCTTGGATTATCAATAATGACTTTTCT
Protein sequenceShow/hide protein sequence
HTFHLTSNFYLLGVGLLLLQRMWSFPSVLLFSIVMISNYIYQYVCSWIINNDFS