CuGenDBv2

Gene ID	MS001304
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Tail fiber
Genome location	scaffold36:3167248..3171246
RNA-Seq Expression	MS001304
Synteny	MS001304
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008445192.1 PREDICTED: uncharacterized protein LOC103488297 isoform X2 [Cucumis melo]

4.9e-103

92.56

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Query:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
        MA  TPSSTST S+ WVRNLSSIASR++F LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS+L DIYN
Subjt:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN

Query:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
        LTN+KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKKVVR APAR
Subjt:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

XP_008445193.1 PREDICTED: uncharacterized protein LOC103488297 isoform X4 [Cucumis melo]

4.9e-103

92.56

Show/hide

Query:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
        MA  TPSSTST S+ WVRNLSSIASR++F LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS+L DIYN
Subjt:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN

Query:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
        LTN+KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKKVVR APAR
Subjt:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

XP_016900009.1 PREDICTED: uncharacterized protein LOC103488297 isoform X3 [Cucumis melo]

4.9e-103

92.56

Show/hide

Query:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
        MA  TPSSTST S+ WVRNLSSIASR++F LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS+L DIYN
Subjt:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN

Query:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
        LTN+KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKKVVR APAR
Subjt:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

XP_022131291.1 uncharacterized protein LOC111004557 [Momordica charantia]

2.8e-111

100

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Query:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
        MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
Subjt:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN

Query:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
        LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
Subjt:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

XP_038883986.1 uncharacterized protein LOC120074948 [Benincasa hispida]

2.9e-103

93.02

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Query:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
        MA  T SSTS  S+ W+RNLSSIASRI+FFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSW+NL DIYN
Subjt:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN

Query:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
        LTN+KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKKVVR APAR
Subjt:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BC32 uncharacterized protein LOC103488297 isoform X2

2.4e-103

92.56

Show/hide

Query:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
        MA  TPSSTST S+ WVRNLSSIASR++F LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS+L DIYN
Subjt:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN

Query:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
        LTN+KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKKVVR APAR
Subjt:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

A0A1S3BCZ0 uncharacterized protein LOC103488297 isoform X4

2.4e-103

92.56

Show/hide

Query:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
        MA  TPSSTST S+ WVRNLSSIASR++F LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS+L DIYN
Subjt:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN

Query:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
        LTN+KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKKVVR APAR
Subjt:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

A0A1S4DVJ9 uncharacterized protein LOC103488297 isoform X3

2.4e-103

92.56

Show/hide

Query:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
        MA  TPSSTST S+ WVRNLSSIASR++F LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS+L DIYN
Subjt:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN

Query:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
        LTN+KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKKVVR APAR
Subjt:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

A0A5A7VF29 Uncharacterized protein

2.4e-103

92.56

Show/hide

Query:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
        MA  TPSSTST S+ WVRNLSSIASR++F LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGA+VNGLVMNLTVPSWS+L DIYN
Subjt:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN

Query:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
        LTN+KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKKVVR APAR
Subjt:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

A0A6J1BP64 uncharacterized protein LOC111004557

1.4e-111

100

Show/hide

Query:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
        MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN
Subjt:  MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYN

Query:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
        LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR
Subjt:  LTNVKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G80200.1 unknown protein

2.4e-31

35.4

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Query:  TSRGWVRNLSSIASRIFFFLIILQIPLFR-----------------------------IPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNG
        + + W   +S IAS +F  LI+ QIPLFR                             + CR+  C TPL V SS+LIA+++ P+ +VK LLYPGAI   
Subjt:  TSRGWVRNLSSIASRIFFFLIILQIPLFR-----------------------------IPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNG

Query:  LVMNLTVPSWSNLLDIYNLTNV-KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVN---TDPTKSVYVYPTMILA
        L     +PS+ +L   Y+   + + +S  TD+  LEV AGS   + GA + L KP R++  GTLL+ WGL+++ +L    +   +    SV VYPT+ LA
Subjt:  LVMNLTVPSWSNLLDIYNLTNV-KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVN---TDPTKSVYVYPTMILA

Query:  VICAFSSVKYDVKKVVRSAPARPIAK
         + AF S++ DV+K++R   +  ++K
Subjt:  VICAFSSVKYDVKKVVRSAPARPIAK

AT5G11280.1 unknown protein

7.0e-92

77.83

Show/hide

Query:  SRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYNLTNVKEASAVTD
        S+GW++  +S+AS ++F LI+ QIPLFR+PCRSGMC++P+HVTSSQLI+SE+FP P++KALLYPGA+VNGL +N+T P W N+LDIYNLTNVKEASAVTD
Subjt:  SRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYNLTNVKEASAVTD

Query:  LQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPARPIAKPLQSSSKS
        LQRLEVLAGSYFSVAGAFVGLLKPGRMSMFG+LL++WGLVKEGILGKPVNTDP K+VYVYPTM+LA+ICAFS +KYD++K  R+APARPIAKPL SSSKS
Subjt:  LQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPARPIAKPLQSSSKS

Query:  KLK
        KLK
Subjt:  KLK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCACCCCCCACGCCATCGTCGACATCAACAACATCCAGGGGTTGGGTCAGAAATCTTTCATCAATCGCATCTCGCATCTTCTTCTTCCTTATCATACTTCAGATCCC
TCTCTTCAGGATCCCATGCAGATCTGGCATGTGTACTACTCCTTTGCACGTGACTTCATCCCAGTTGATTGCAAGTGAAGTCTTTCCTGCACCTGTTGTTAAGGCACTTC
TCTATCCTGGAGCAATCGTGAATGGACTTGTTATGAACTTGACAGTTCCTAGCTGGAGTAACTTGTTAGACATATATAACTTGACCAATGTGAAGGAAGCCTCTGCTGTG
ACTGATCTTCAACGTTTAGAGGTTCTTGCTGGAAGCTATTTCTCAGTGGCTGGCGCCTTTGTGGGTCTTTTGAAGCCCGGGAGGATGAGCATGTTCGGAACGCTATTGGT
AATTTGGGGTCTTGTTAAGGAAGGAATCCTTGGAAAACCAGTGAACACAGATCCTACAAAATCTGTTTATGTTTATCCTACAATGATTCTTGCCGTGATCTGTGCTTTCT
CTTCGGTTAAGTATGATGTGAAGAAGGTAGTTAGGAGTGCCCCTGCTCGACCCATTGCAAAGCCTCTTCAAAGCTCATCAAAATCTAAGCTTAAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPPTPSSTSTTSRGWVRNLSSIASRIFFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAIVNGLVMNLTVPSWSNLLDIYNLTNVKEASAV
TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPTKSVYVYPTMILAVICAFSSVKYDVKKVVRSAPARPIAKPLQSSSKSKLK

MS001304 (gene) of Bitter gourd (TR) v1 genome