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MS001316 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001316
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4050 domain-containing protein
Genome locationscaffold36:3234831..3234977
RNA-Seq ExpressionMS001316
SyntenyMS001316
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064925.1 uncharacterized protein E6C27_scaffold82G002430 [Cucumis melo var. makuwa]2.5e-1587.76Show/hide
Query:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR
        MYSRCCLL+RLEGCSSK PCCSFLQFSGEY+RALILLMVD IKLLF+ R
Subjt:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR

XP_004138726.1 uncharacterized protein LOC101216869 [Cucumis sativus]2.5e-1587.76Show/hide
Query:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR
        MYSRCCLL+RLEGCSSK PCCSFLQFSGEY+RALILLMVD IKLLF+ R
Subjt:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR

XP_008445211.1 PREDICTED: uncharacterized protein LOC103488310 isoform X1 [Cucumis melo]2.5e-1587.76Show/hide
Query:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR
        MYSRCCLL+RLEGCSSK PCCSFLQFSGEY+RALILLMVD IKLLF+ R
Subjt:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR

XP_022951409.1 uncharacterized protein LOC111454240 isoform X1 [Cucurbita moschata]1.4e-1385.71Show/hide
Query:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR
        MYSRCCLLSRLEGCSS KPCCSFLQFSG+YLRALI+L+VDN+KLLF+ R
Subjt:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR

XP_038885342.1 uncharacterized protein LOC120075759 isoform X1 [Benincasa hispida]1.3e-1693.88Show/hide
Query:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR
        MYSRCCLL RLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLF+ R
Subjt:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR

TrEMBL top hitse value%identityAlignment
A0A0A0LPL3 Uncharacterized protein1.2e-1587.76Show/hide
Query:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR
        MYSRCCLL+RLEGCSSK PCCSFLQFSGEY+RALILLMVD IKLLF+ R
Subjt:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR

A0A1S3BC47 uncharacterized protein LOC103488310 isoform X11.2e-1587.76Show/hide
Query:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR
        MYSRCCLL+RLEGCSSK PCCSFLQFSGEY+RALILLMVD IKLLF+ R
Subjt:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR

A0A5A7VGA9 Uncharacterized protein1.2e-1587.76Show/hide
Query:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR
        MYSRCCLL+RLEGCSSK PCCSFLQFSGEY+RALILLMVD IKLLF+ R
Subjt:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR

A0A6J1GIP5 uncharacterized protein LOC111454240 isoform X16.7e-1485.71Show/hide
Query:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR
        MYSRCCLLSRLEGCSS KPCCSFLQFSG+YLRALI+L+VDN+KLLF+ R
Subjt:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR

A0A6J1KQM2 uncharacterized protein LOC111496323 isoform X16.7e-1485.71Show/hide
Query:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR
        MYSRCCLLSRLEGCSS KPCCSFLQFSG+YLRALI+L+VDN+KLLF+ R
Subjt:  MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCTAGGTGTTGTCTCCTCAGCCGTTTAGAGGGTTGCTCTAGCAAGAAACCATGTTGCTCGTTTTTACAGTTTTCTGGAGAATATCTGCGCGCTCTTATACTTTT
GATGGTGGATAATATCAAGCTTCTTTTCAATGTAAGG
mRNA sequenceShow/hide mRNA sequence
ATGTATTCTAGGTGTTGTCTCCTCAGCCGTTTAGAGGGTTGCTCTAGCAAGAAACCATGTTGCTCGTTTTTACAGTTTTCTGGAGAATATCTGCGCGCTCTTATACTTTT
GATGGTGGATAATATCAAGCTTCTTTTCAATGTAAGG
Protein sequenceShow/hide protein sequence
MYSRCCLLSRLEGCSSKKPCCSFLQFSGEYLRALILLMVDNIKLLFNVR