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MS001324 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001324
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionindole-3-acetic acid inducible
Genome locationscaffold36:3274000..3274074
RNA-Seq ExpressionMS001324
SyntenyMS001324
Gene Ontology termsNA
InterPro domainsIPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131637.1 auxin-responsive protein IAA29-like [Momordica charantia]5.1e-04100Show/hide
Query:  DFTVIYEDKDGDWLLAEDLPW
        DFTVIYEDKDGDWLLAEDLPW
Subjt:  DFTVIYEDKDGDWLLAEDLPW

TrEMBL top hitse value%identityAlignment
A0A6J1BRK7 Auxin-responsive protein2.5e-04100Show/hide
Query:  DFTVIYEDKDGDWLLAEDLPW
        DFTVIYEDKDGDWLLAEDLPW
Subjt:  DFTVIYEDKDGDWLLAEDLPW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04550.2 AUX/IAA transcriptional regulator family protein1.9e-0459.09Show/hide
Query:  DFTVIYEDKDGDWLLAEDLPWK
        DF + YEDK+GDW+L  D+PW+
Subjt:  DFTVIYEDKDGDWLLAEDLPWK

AT1G15580.1 indole-3-acetic acid inducible 51.1e-0471.43Show/hide
Query:  IYEDKDGDWLLAEDLPWKCVL
        IYEDKDGDW+LA D+PW+  L
Subjt:  IYEDKDGDWLLAEDLPWKCVL

AT3G15540.1 indole-3-acetic acid inducible 198.4e-0566.67Show/hide
Query:  DFTVIYEDKDGDWLLAEDLPW
        ++  IYEDKDGDW+LA D+PW
Subjt:  DFTVIYEDKDGDWLLAEDLPW

AT5G43700.1 AUX/IAA transcriptional regulator family protein1.9e-0463.64Show/hide
Query:  DFTVIYEDKDGDWLLAEDLPWK
        DF   YEDKDGDW+L  D+PW+
Subjt:  DFTVIYEDKDGDWLLAEDLPWK

AT5G65670.1 indole-3-acetic acid inducible 91.9e-0459.09Show/hide
Query:  DFTVIYEDKDGDWLLAEDLPWK
        D+ + YEDKDGDW+L  D+PW+
Subjt:  DFTVIYEDKDGDWLLAEDLPWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTTTACGGTGATCTACGAAGACAAAGACGGTGATTGGCTTCTAGCAGAAGATCTTCCATGGAAGTGCGTTTTA
mRNA sequenceShow/hide mRNA sequence
GATTTTACGGTGATCTACGAAGACAAAGACGGTGATTGGCTTCTAGCAGAAGATCTTCCATGGAAGTGCGTTTTA
Protein sequenceShow/hide protein sequence
DFTVIYEDKDGDWLLAEDLPWKCVL