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MS001341 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001341
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionStress induced protein
Genome locationscaffold36:3351186..3351653
RNA-Seq ExpressionMS001341
SyntenyMS001341
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020402.1 hypothetical protein SDJN02_17086, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-4566.67Show/hide
Query:  ASYSSSTSSSAIDETLR-----TDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQ--PHEDQVKQSWMMKKVKRFKEIIKAVAGRKW
        +S SSS+SSSAIDET+R     ++RIEE+ D EVGVS   SS G FFGFGSR +R+S  VRCRY+ LQ   ++++V QSWMMKKVKRF+EIIKA+A  KW
Subjt:  ASYSSSTSSSAIDETLR-----TDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQ--PHEDQVKQSWMMKKVKRFKEIIKAVAGRKW

Query:  RSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV
        RSFI+GI++K+RSVRFQYDPRSYALNFD G GEDGGG GRHG+  PSE P+GLGI M RS++
Subjt:  RSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV

KAG7029494.1 hypothetical protein SDJN02_07833, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-4566.46Show/hide
Query:  MASYSSSTSSSAIDETLRT-DRIEEDDDR-------EVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGR
        MAS S+     +  E +R  DRIEE +DR       EVGVS   SSCGCFFGFGSR +RSS  VRC+YL L+ +E +VKQSWMMKKVKRFK+IIKA+AGR
Subjt:  MASYSSSTSSSAIDETLRT-DRIEEDDDR-------EVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGR

Query:  KWRSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV
        KWRSFI+GI++K+RSVRFQYDPRSYALNFDEG GE+ G  GRHGFR P  +PIGLG GMN SQ+
Subjt:  KWRSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV

XP_022131993.1 uncharacterized protein LOC111004972 [Momordica charantia]1.5e-7798.08Show/hide
Query:  MASYSSSTSSSAIDETLRTDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISG
        MASYSSSTSSS+IDETLRTDRIEEDDDREVGVSSY SSCGCFFGFGSRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISG
Subjt:  MASYSSSTSSSAIDETLRTDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISG

Query:  IISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV
        IISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPS TPIGLGIGMNRSQV
Subjt:  IISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV

XP_023002532.1 uncharacterized protein LOC111496346 [Cucurbita maxima]8.3e-4465.85Show/hide
Query:  MASYSSSTSSSAIDETLR-----TDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQ---PHEDQVKQSWMMKKVKRFKEIIKAVAGR
        MAS SSS+SSSAIDET R     ++RIEE+ D EVGVS   SS G FF FGS  +RSS  VRCRY+ LQ    ++++V QSWMMKKVKRF+EII+A+A  
Subjt:  MASYSSSTSSSAIDETLR-----TDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQ---PHEDQVKQSWMMKKVKRFKEIIKAVAGR

Query:  KWRSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV
        KWRSFI+GI++K+RSVRFQYDPRSYALNFD G GEDG G GRHG+  PSE+P+GLGI MNRS++
Subjt:  KWRSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV

XP_023537514.1 uncharacterized protein LOC111798530 [Cucurbita pepo subsp. pepo]2.1e-4767.92Show/hide
Query:  SSSTSSSAIDETLR-----TDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPL--QPHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSF
        +SS+SSSAIDET R     ++RIEE+ D EVGVS   SSCG FFGFGSR +RSS  VRCRY+ L  Q ++++V QSWMMKKVKRF+EI+KA+A  KWRSF
Subjt:  SSSTSSSAIDETLR-----TDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPL--QPHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSF

Query:  ISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV
        I+GI++K+RSVRFQYDPRSYALNFD G GEDGGG GRHG+  PSE P+GLGI MNRS++
Subjt:  ISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV

TrEMBL top hitse value%identityAlignment
A0A1S3BC68 uncharacterized protein LOC1034883312.5e-3863.8Show/hide
Query:  ASYSSSTSSSAIDETLRT--DRIEEDD---DREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPH---EDQVKQSWMMKKVKRFKEIIKAVAGRK
        +S SSS+SSSAID TLR+  DRIEE +   D EVG  SY SSCGCFFGFGSR +R    VR  YLPLQ +   E+  +QSWMM+KVKR  EIIKA+AGRK
Subjt:  ASYSSSTSSSAIDETLRT--DRIEEDD---DREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPH---EDQVKQSWMMKKVKRFKEIIKAVAGRK

Query:  WRSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV
        WRS I+GII+K+RSVRFQYDPRSYALNFDEG  E+G           S  PIGLGIGMNR+Q+
Subjt:  WRSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV

A0A5A7VG87 Stress induced protein2.5e-3863.8Show/hide
Query:  ASYSSSTSSSAIDETLRT--DRIEEDD---DREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPH---EDQVKQSWMMKKVKRFKEIIKAVAGRK
        +S SSS+SSSAID TLR+  DRIEE +   D EVG  SY SSCGCFFGFGSR +R    VR  YLPLQ +   E+  +QSWMM+KVKR  EIIKA+AGRK
Subjt:  ASYSSSTSSSAIDETLRT--DRIEEDD---DREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPH---EDQVKQSWMMKKVKRFKEIIKAVAGRK

Query:  WRSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV
        WRS I+GII+K+RSVRFQYDPRSYALNFDEG  E+G           S  PIGLGIGMNR+Q+
Subjt:  WRSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV

A0A6J1BV09 uncharacterized protein LOC1110049727.2e-7898.08Show/hide
Query:  MASYSSSTSSSAIDETLRTDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISG
        MASYSSSTSSS+IDETLRTDRIEEDDDREVGVSSY SSCGCFFGFGSRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISG
Subjt:  MASYSSSTSSSAIDETLRTDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISG

Query:  IISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV
        IISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPS TPIGLGIGMNRSQV
Subjt:  IISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV

A0A6J1K5B0 uncharacterized protein LOC1114924253.8e-4267.76Show/hide
Query:  MASYSSSTSSSAIDETLRT-DRIEEDDDR-----EVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKW
        MAS ++     +  E +R  DRIEE +DR     EVGVS   SSCGCFFGFGSR +RSS  VRCRYL L+ +E +VKQSWMMKKVKRFK+IIKA+AGRKW
Subjt:  MASYSSSTSSSAIDETLRT-DRIEEDDDR-----EVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKW

Query:  RSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIG
        RSFI+GI++K+RSVRFQYDPRSYALNFDEG GE+ GG GRHGFR P  +PIG
Subjt:  RSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIG

A0A6J1KJS5 uncharacterized protein LOC1114963464.0e-4465.85Show/hide
Query:  MASYSSSTSSSAIDETLR-----TDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQ---PHEDQVKQSWMMKKVKRFKEIIKAVAGR
        MAS SSS+SSSAIDET R     ++RIEE+ D EVGVS   SS G FF FGS  +RSS  VRCRY+ LQ    ++++V QSWMMKKVKRF+EII+A+A  
Subjt:  MASYSSSTSSSAIDETLR-----TDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQ---PHEDQVKQSWMMKKVKRFKEIIKAVAGR

Query:  KWRSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV
        KWRSFI+GI++K+RSVRFQYDPRSYALNFD G GEDG G GRHG+  PSE+P+GLGI MNRS++
Subjt:  KWRSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G25240.1 unknown protein3.5e-0838.32Show/hide
Query:  CGCFFGFG-SRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKW----RSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSG
        CG F  F  +R  R  D  R R       +++ + +W  +K+K  KEI + +AG KW    RSF SG    +R V F YD ++Y+LNFD+G   DG  S 
Subjt:  CGCFFGFG-SRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKW----RSFISGIISKKRSVRFQYDPRSYALNFDEGSGEDGGGSG

Query:  RHGFRAP
           F AP
Subjt:  RHGFRAP

AT5G62865.1 unknown protein1.2e-0531.01Show/hide
Query:  ETLRTDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGV------RCRYLPLQPH--EDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISGIISKKR
        E  ++D   + D R      Y+  C CF  F  R++RSS  V      R R +    H  +   +  W ++   + +E  + VAG +W++FI       R
Subjt:  ETLRTDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGV------RCRYLPLQPH--EDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISGIISKKR

Query:  -------SVRFQYDPRSYALNFDEGSGED
               S +FQYDP SY+LNFD+   ED
Subjt:  -------SVRFQYDPRSYALNFDEGSGED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTTATTCTTCTTCTACTTCTTCTTCCGCCATTGATGAGACCTTGCGAACCGATCGGATCGAGGAGGATGATGATCGTGAAGTCGGAGTTTCGTCATATAATTC
CTCGTGCGGATGTTTCTTCGGATTCGGATCGAGACAGGCTCGGAGCAGCGACGGCGTCCGGTGCCGATATCTACCGCTGCAACCGCACGAGGATCAAGTGAAACAGAGTT
GGATGATGAAGAAGGTGAAGAGATTCAAGGAGATTATAAAAGCCGTGGCAGGGCGGAAGTGGAGAAGCTTCATTAGTGGAATAATTAGCAAGAAACGGAGTGTGAGATTT
CAGTACGATCCGAGGAGTTACGCTTTGAATTTTGACGAAGGGAGCGGAGAAGACGGAGGCGGAAGTGGACGCCATGGTTTTAGAGCACCGTCTGAAACTCCGATCGGATT
GGGAATCGGAATGAACAGAAGCCAAGTA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTTATTCTTCTTCTACTTCTTCTTCCGCCATTGATGAGACCTTGCGAACCGATCGGATCGAGGAGGATGATGATCGTGAAGTCGGAGTTTCGTCATATAATTC
CTCGTGCGGATGTTTCTTCGGATTCGGATCGAGACAGGCTCGGAGCAGCGACGGCGTCCGGTGCCGATATCTACCGCTGCAACCGCACGAGGATCAAGTGAAACAGAGTT
GGATGATGAAGAAGGTGAAGAGATTCAAGGAGATTATAAAAGCCGTGGCAGGGCGGAAGTGGAGAAGCTTCATTAGTGGAATAATTAGCAAGAAACGGAGTGTGAGATTT
CAGTACGATCCGAGGAGTTACGCTTTGAATTTTGACGAAGGGAGCGGAGAAGACGGAGGCGGAAGTGGACGCCATGGTTTTAGAGCACCGTCTGAAACTCCGATCGGATT
GGGAATCGGAATGAACAGAAGCCAAGTA
Protein sequenceShow/hide protein sequence
MASYSSSTSSSAIDETLRTDRIEEDDDREVGVSSYNSSCGCFFGFGSRQARSSDGVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISGIISKKRSVRF
QYDPRSYALNFDEGSGEDGGGSGRHGFRAPSETPIGLGIGMNRSQV