; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001352 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001352
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationscaffold36:3435551..3436372
RNA-Seq ExpressionMS001352
SyntenyMS001352
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020412.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-15093.8Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ+ N
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN

XP_022132176.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]1.2e-15999.64Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVWDHNLEEEFAL+REIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN

XP_022132308.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]4.7e-15193.8Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKG+SI IREVW+ NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPVGAFKNIN+YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFN+SEDIFASDSIELLRQCGIDFKKNNEEGIDVNRF ELLMSSG+VLND VNWVTFHSGYDFGYLLKLLTCR+LPDTQAGFFDLIN+YFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYAGVLYGLGVE+GQ  N
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN

XP_022951690.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]1.8e-15093.8Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ+ N
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN

XP_023538244.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo]5.2e-15093.43Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVD+FNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ+ N
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN

TrEMBL top hitse value%identityAlignment
A0A6J1BRI8 Poly(A)-specific ribonuclease6.0e-16099.64Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVWDHNLEEEFAL+REIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN

A0A6J1BVW9 Poly(A)-specific ribonuclease2.3e-15193.8Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKG+SI IREVW+ NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPVGAFKNIN+YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFN+SEDIFASDSIELLRQCGIDFKKNNEEGIDVNRF ELLMSSG+VLND VNWVTFHSGYDFGYLLKLLTCR+LPDTQAGFFDLIN+YFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYAGVLYGLGVE+GQ  N
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN

A0A6J1GJJ8 Poly(A)-specific ribonuclease8.6e-15193.8Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ+ N
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN

A0A6J1KLE0 Poly(A)-specific ribonuclease8.6e-15193.8Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ+ N
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN

B9RNX3 Poly(A)-specific ribonuclease2.8e-14992.28Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSI+PKG+SIHIREVW+ NLEEEF LIREIVDQFNY+AMDTEFPGVVLRPVG FKNIN+YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREFNISEDIFASDSIELLRQCGIDFKKNNE+GIDVNRF EL+MSSGIVLND V+WVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLIN YFPMVYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQS
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKLRD FFNGST+KYAGVLYGLGVENGQ+
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQS

SwissProt top hitse value%identityAlignment
Q08BM8 CCR4-NOT transcription complex subunit 76.9e-8156.13Show/hide
Query:  SIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI
        S  I EVW  NLEEE   IR++  +FNYIAMDTEFPGVV RP+G F++  +Y YQ L+ NVD+LK+IQLGLTF +E G  P  GT     WQFNF+ FN+
Subjt:  SIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI

Query:  SEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMKFCN
        +ED++A DSIELL   GI FKK+ EEGI+   FAELLM+SG+VL + V W++FHSGYDFGYL+K+L+   LPD +  FF+++ ++FP++YD+K+LMK C 
Subjt:  SEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMKFCN

Query:  SFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLG-----VENG
        +  GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+ FF       KY G LYGLG     V+NG
Subjt:  SFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLG-----VENG

Q9LEU4 Probable CCR4-associated factor 1 homolog 106.2e-12276.98Show/hide
Query:  KGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVWD+NL EEFALIREIVD+F+YIAMDTEFPGVVL+PV  FK  N+ NY+TLK+NVD+LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMK
        FNI EDI+AS+SIELLRQCGIDFKKN E+GIDV RF EL+MSSGIVLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP VYDIKHLM 
Subjt:  FNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMK

Query:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENG
        FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE+G
Subjt:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENG

Q9S9P2 Probable CCR4-associated factor 1 homolog 26.2e-9864.02Show/hide
Query:  ESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNIN------EYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQF
        ++I IREVW+HNLE+E ALI + +D F Y+AMDTEFPG+V + V A  N N      EYNY TLK NV+MLKLIQLGLT SDE GNLPTCGT+K CIWQF
Subjt:  ESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNIN------EYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQF

Query:  NFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIK
        NFREFN+  D+FA DSIELLR+  ID +KNNE G+D  RFAELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP+  + FFD +  +FP+VYDIK
Subjt:  NFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIK

Query:  HLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL
        +LM FC + +GGL K+AELL V+R+G+ HQAGSDSLLT  TF K+++ FF GS  KY+G L+GL
Subjt:  HLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.6e-12274.54Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  LIR++VD F Y+AMDTEFPG+V+RPVG FK+  +Y+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREF++  DIFA DSIELL+Q GID  KN  +GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LPD+Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

Q9SKZ2 Probable CCR4-associated factor 1 homolog 72.7e-12575.27Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVW+ NLE E ALIRE+VD F ++AMDTEFPG+V RPVG FK   EY+Y+TLK NV++LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYD
        QFNFREF++  DI+A+DSIELLRQ GIDF KNNE GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LP+TQ GFF++I++YFP VYD
Subjt:  QFNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYD

Query:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
        IKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVENGQ ++
Subjt:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-12374.54Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  LIR++VD F Y+AMDTEFPG+V+RPVG FK+  +Y+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREF++  DIFA DSIELL+Q GID  KN  +GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LPD+Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-12374.54Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  LIR++VD F Y+AMDTEFPG+V+RPVG FK+  +Y+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREF++  DIFA DSIELL+Q GID  KN  +GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LPD+Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-12274.35Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVW+ NL+EE  LIR++VD F Y+AMDTEFPG+V+RPVG FK+  +Y+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI
        FNFREF++  DIFA DSIELL+Q GID  KN  +GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LPD+Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVEN
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVEN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVEN

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-12675.27Show/hide
Query:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVW+ NLE E ALIRE+VD F ++AMDTEFPG+V RPVG FK   EY+Y+TLK NV++LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYD
        QFNFREF++  DI+A+DSIELLRQ GIDF KNNE GID  RFAELLMSSGIVLN+ V+WVTFHSGYDFGYLLKLLTC++LP+TQ GFF++I++YFP VYD
Subjt:  QFNFREFNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYD

Query:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN
        IKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVENGQ ++
Subjt:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.4e-12376.98Show/hide
Query:  KGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVWD+NL EEFALIREIVD+F+YIAMDTEFPGVVL+PV  FK  N+ NY+TLK+NVD+LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMK
        FNI EDI+AS+SIELLRQCGIDFKKN E+GIDV RF EL+MSSGIVLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP VYDIKHLM 
Subjt:  FNISEDIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMK

Query:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENG
        FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE+G
Subjt:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTACCGAAAGGTGAGTCGATTCATATCCGTGAGGTTTGGGACCATAATTTGGAGGAGGAGTTTGCTCTAATACGTGAAATCGTCGACCAATTTAACTACAT
AGCGATGGACACCGAGTTCCCCGGCGTGGTGCTTCGCCCTGTGGGTGCGTTTAAGAATATCAATGAATATAACTATCAAACTCTCAAGGACAACGTCGACATGTTGAAGT
TGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGTAATCTTCCAACGTGTGGAACGGATAAGTTTTGCATATGGCAGTTCAATTTCCGCGAATTCAACATCAGTGAA
GATATTTTTGCGAGTGATTCTATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAATGAAGAGGGTATCGATGTCAATCGATTTGCTGAGCTTCTAATGTC
TTCTGGGATTGTGTTGAACGATACCGTTAACTGGGTGACGTTCCATAGTGGGTATGATTTCGGTTACTTGCTGAAATTGCTGACTTGTCGAAGCTTACCAGACACACAGG
CAGGATTTTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAATAGTTTTCATGGTGGGCTGAACAAGCTTGCAGAGTTA
TTAGAAGTGGAGAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTTCTTACTGCCTGTACTTTCAGAAAGTTAAGGGATACTTTTTTCAATGGATCGACACAGAA
ATACGCAGGTGTTTTATATGGTCTTGGTGTTGAGAATGGACAGAGTATCAAT
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTACCGAAAGGTGAGTCGATTCATATCCGTGAGGTTTGGGACCATAATTTGGAGGAGGAGTTTGCTCTAATACGTGAAATCGTCGACCAATTTAACTACAT
AGCGATGGACACCGAGTTCCCCGGCGTGGTGCTTCGCCCTGTGGGTGCGTTTAAGAATATCAATGAATATAACTATCAAACTCTCAAGGACAACGTCGACATGTTGAAGT
TGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGTAATCTTCCAACGTGTGGAACGGATAAGTTTTGCATATGGCAGTTCAATTTCCGCGAATTCAACATCAGTGAA
GATATTTTTGCGAGTGATTCTATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAATGAAGAGGGTATCGATGTCAATCGATTTGCTGAGCTTCTAATGTC
TTCTGGGATTGTGTTGAACGATACCGTTAACTGGGTGACGTTCCATAGTGGGTATGATTTCGGTTACTTGCTGAAATTGCTGACTTGTCGAAGCTTACCAGACACACAGG
CAGGATTTTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAATAGTTTTCATGGTGGGCTGAACAAGCTTGCAGAGTTA
TTAGAAGTGGAGAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTTCTTACTGCCTGTACTTTCAGAAAGTTAAGGGATACTTTTTTCAATGGATCGACACAGAA
ATACGCAGGTGTTTTATATGGTCTTGGTGTTGAGAATGGACAGAGTATCAAT
Protein sequenceShow/hide protein sequence
MSILPKGESIHIREVWDHNLEEEFALIREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISE
DIFASDSIELLRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAEL
LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN