; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001362 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001362
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontapetum determinant 1
Genome locationscaffold36:3544574..3544870
RNA-Seq ExpressionMS001362
SyntenyMS001362
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EHA8589402.1 TPD1 protein [Cocos nucifera]5.5e-2554.55Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C ++D+V+ QG      NGIPT+ V++ N C TGC VAD+H+ CG FSSA+ INP VFRRLG++DCLVN+G ++ P  +LSFQYA T  +PL +SS  C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

MQM13404.1 hypothetical protein [Colocasia esculenta]1.4e-2554.55Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C  +D+ + QGE P   NGIPT+ VEI N C +GC V+D+H+ CG FSSA+ INP +FRR+GF+DCLVN+G  +PP  ++SFQYA T ++PL +SS  C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

RWW83717.1 hypothetical protein BHE74_00007763 [Ensete ventricosum]7.1e-2557.58Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C E DI++ QG      NGIPT+ V+I N C TGC VAD+H++CG FSSA+ INPLVFRRL F+DCLVN+G  +    +LSFQYA T + PLS+SS  C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

XP_010936413.1 TPD1 protein homolog 1-like [Elaeis guineensis]5.5e-2554.55Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C ++D+V+ QG      NGIPT+ V++ N C TGC VAD+H+ CG FSSA+ INP VFRRLG++DCLVN+G ++ P  +LSFQYA T  +PL +SS  C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

XP_022133419.1 TPD1 protein homolog 1-like [Momordica charantia]4.2e-2554.55Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C E DI + QG+     +GIP + VEI N C +GC ++++HLKCG FSSA+ +NP VFRRL ++DCL+N+G  +PPA TLSFQYA T  +PLSL+S+ C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

TrEMBL top hitse value%identityAlignment
A0A427AFF7 Uncharacterized protein3.5e-2557.58Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C E DI++ QG      NGIPT+ V+I N C TGC VAD+H++CG FSSA+ INPLVFRRL F+DCLVN+G  +    +LSFQYA T + PLS+SS  C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

A0A444D6T6 Uncharacterized protein3.5e-2557.58Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C E DI++ QG      NGIPT+ V+I N C TGC VAD+H++CG FSSA+ INPLVFRRL F+DCLVN+G  +    +LSFQYA T + PLS+SS  C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

A0A6I9S1Y6 TPD1 protein homolog 1-like2.6e-2554.55Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C ++D+V+ QG      NGIPT+ V++ N C TGC VAD+H+ CG FSSA+ INP VFRRLG++DCLVN+G ++ P  +LSFQYA T  +PL +SS  C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

A0A6J1BVX9 TPD1 protein homolog 1-like2.0e-2554.55Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C E DI + QG+     +GIP + VEI N C +GC ++++HLKCG FSSA+ +NP VFRRL ++DCL+N+G  +PPA TLSFQYA T  +PLSL+S+ C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

A0A7N2MPR5 Uncharacterized protein3.5e-2557.58Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C ++DIV+ QG      +GIPT+ VEI N C T C +A +HLKCG FSSAK INP VFRRLGFNDCLVN+G+ +    +LSFQYA T  +P+S+SS  C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058351.5e-0437.5Show/hide
Query:  FIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFN--DCLVNNGRLIPPATTLSFQYATTSKFPL
        F VE+ N+C   C + +L LKC  F  +  ++P   R L  +  +C+VN+G  + P  TLSF Y+ T +F L
Subjt:  FIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFN--DCLVNNGRLIPPATTLSFQYATTSKFPL

Q1G3T1 TPD1 protein homolog 11.4e-2346.46Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C ++DIV+ QG      +G+P++ VEI N C + C +A++H+ CG FSS + +NP VFRRL ++DCLVN+G+ + P  +LSFQYA +  +PLS++S  C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

Q2QR54 TPD1 protein homolog 1A5.1e-1839.42Show/hide
Query:  GENDIVITQGEGPRQSNGIPTFIVEITNQCRTG------CGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLS
        G +DI I QG      +G+P + V++ N+C  G      C +A +H++CG FSS   ++P VFRRLG +DCL+N+GR +    T+SF+Y  +  + LS+S
Subjt:  GENDIVITQGEGPRQSNGIPTFIVEITNQCRTG------CGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLS

Query:  SSKC
         + C
Subjt:  SSKC

Q6TLJ2 Protein TAPETUM DETERMINANT 14.8e-2450.51Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C   DIV+ Q       NGIP ++VEITNQC +GC ++ +H+ CG FSSAK INP VF+R+ ++DCLVNNG+ +P  +TLSF YA T  + LS++   C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

Q8S6P9 TPD1 protein homolog 1B9.4e-2042.42Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C E ++V+ Q       +GIPT+ VEI N C T C V D+H+ CG F+SA+ ++P  F+R+GFNDCLV  G  + P+  +SFQY+ +  +PL++++  C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein1.0e-0537.5Show/hide
Query:  FIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFN--DCLVNNGRLIPPATTLSFQYATTSKFPL
        F VE+ N+C   C + +L LKC  F  +  ++P   R L  +  +C+VN+G  + P  TLSF Y+ T +F L
Subjt:  FIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFN--DCLVNNGRLIPPATTLSFQYATTSKFPL

AT1G32583.1 FUNCTIONS IN: molecular_function unknown9.9e-2546.46Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C ++DIV+ QG      +G+P++ VEI N C + C +A++H+ CG FSS + +NP VFRRL ++DCLVN+G+ + P  +LSFQYA +  +PLS++S  C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC

AT4G24972.1 tapetum determinant 13.4e-2550.51Show/hide
Query:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC
        C   DIV+ Q       NGIP ++VEITNQC +GC ++ +H+ CG FSSAK INP VF+R+ ++DCLVNNG+ +P  +TLSF YA T  + LS++   C
Subjt:  CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTGGAGAGAATGATATAGTGATAACCCAAGGAGAGGGGCCGCGGCAGTCCAATGGGATCCCTACATTCATCGTGGAGATAACGAACCAATGCCGAACCGGGTGCGGGGT
GGCCGATCTACATCTGAAATGCGGTTTGTTCAGCTCGGCTAAGTTCATAAACCCTTTGGTCTTTAGGCGCCTTGGCTTCAATGACTGCCTTGTCAACAATGGACGCCTGA
TACCTCCCGCCACTACGTTGTCGTTTCAATATGCTACCACCTCCAAGTTCCCGCTCTCTCTTTCCTCCTCTAAATGC
mRNA sequenceShow/hide mRNA sequence
TGTGGAGAGAATGATATAGTGATAACCCAAGGAGAGGGGCCGCGGCAGTCCAATGGGATCCCTACATTCATCGTGGAGATAACGAACCAATGCCGAACCGGGTGCGGGGT
GGCCGATCTACATCTGAAATGCGGTTTGTTCAGCTCGGCTAAGTTCATAAACCCTTTGGTCTTTAGGCGCCTTGGCTTCAATGACTGCCTTGTCAACAATGGACGCCTGA
TACCTCCCGCCACTACGTTGTCGTTTCAATATGCTACCACCTCCAAGTTCCCGCTCTCTCTTTCCTCCTCTAAATGC
Protein sequenceShow/hide protein sequence
CGENDIVITQGEGPRQSNGIPTFIVEITNQCRTGCGVADLHLKCGLFSSAKFINPLVFRRLGFNDCLVNNGRLIPPATTLSFQYATTSKFPLSLSSSKC