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MS001374 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001374
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger protein CONSTANS
Genome locationscaffold36:3637040..3637306
RNA-Seq ExpressionMS001374
SyntenyMS001374
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064869.1 zinc finger protein CONSTANS-LIKE 4 [Cucumis melo var. makuwa]5.6e-45100Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

XP_004138691.1 zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus]5.6e-45100Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

XP_008445288.1 PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo]5.6e-45100Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

XP_028799044.1 zinc finger protein CONSTANS-LIKE 4 [Prosopis alba]2.1e-4497.75Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATATLFCRADSAFLC+GCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALC+TCDHDIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

XP_038884657.1 zinc finger protein CONSTANS-LIKE 4 [Benincasa hispida]6.2e-4498.88Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATATLFCRADSAFLCL CDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

TrEMBL top hitse value%identityAlignment
A0A0A0LSP8 Uncharacterized protein2.7e-45100Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

A0A1S3BBV1 zinc finger protein CONSTANS-LIKE 42.7e-45100Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

A0A5A7VHC1 Zinc finger protein CONSTANS-LIKE 42.7e-45100Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

A0A6J1HEL1 zinc finger protein CONSTANS-LIKE 4-like6.7e-4496.63Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATATLFCRADSAFLCLGCDS+VHAANKLASRHARVW+CEVCEQAPAHVTCKADAAALCL CDHDIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

A0A6J1K9B3 zinc finger protein CONSTANS-LIKE 4-like6.7e-4496.63Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATATLFCRADSAFLCLGCDS+VHAANKLASRHARVW+CEVCEQAPAHVTCKADAAALCL CDHDIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

SwissProt top hitse value%identityAlignment
O50055 Zinc finger protein CONSTANS-LIKE 17.4e-3269.32Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTP
        CD+C+SA  T++CRADSA+LC  CD++VHAAN+LASRH RV VC+ CE+APA   CKADAA+LC TCD +IHSANPLARRH+RVP+ P
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTP

Q940T9 Zinc finger protein CONSTANS-LIKE 41.1e-4391.01Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATA L+CR D+AFLCL CDSKVHAANKLASRHARVW+CEVCEQAPAHVTCKADAAALC+TCD DIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

Q96502 Zinc finger protein CONSTANS-LIKE 23.1e-3065.91Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTP
        CD+C+SA  T++C ADSA+LC  CD++VHAAN++ASRH RV VC+ CE APA   CKADAA+LC  CD +IHSANPLARRH+RVP+ P
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTP

Q9FHH8 Zinc finger protein CONSTANS-LIKE 51.9e-3271.91Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CD+CKS TA +FCR DSAFLC+ CD+++H+     +RH RVWVCEVCEQAPA VTCKADAAALC++CD DIHSANPLA RHERVPV  F
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

Q9SK53 Zinc finger protein CONSTANS-LIKE 35.1e-4184.27Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKS  ATLFCRAD+AFLC  CD K+H ANKLASRH RVW+CEVCEQAPAHVTCKADAAALC+TCD DIHSANPL+RRHERVP+TPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

Arabidopsis top hitse value%identityAlignment
AT2G24790.1 CONSTANS-like 33.6e-4284.27Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKS  ATLFCRAD+AFLC  CD K+H ANKLASRH RVW+CEVCEQAPAHVTCKADAAALC+TCD DIHSANPL+RRHERVP+TPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

AT2G24790.2 CONSTANS-like 33.6e-4284.27Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKS  ATLFCRAD+AFLC  CD K+H ANKLASRH RVW+CEVCEQAPAHVTCKADAAALC+TCD DIHSANPL+RRHERVP+TPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

AT5G15850.1 CONSTANS-like 15.2e-3369.32Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTP
        CD+C+SA  T++CRADSA+LC  CD++VHAAN+LASRH RV VC+ CE+APA   CKADAA+LC TCD +IHSANPLARRH+RVP+ P
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTP

AT5G24930.1 CONSTANS-like 47.8e-4591.01Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CDSCKSATA L+CR D+AFLCL CDSKVHAANKLASRHARVW+CEVCEQAPAHVTCKADAAALC+TCD DIHSANPLARRHERVPVTPF
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

AT5G57660.1 CONSTANS-like 51.4e-3371.91Show/hide
Query:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF
        CD+CKS TA +FCR DSAFLC+ CD+++H+     +RH RVWVCEVCEQAPA VTCKADAAALC++CD DIHSANPLA RHERVPV  F
Subjt:  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTGACTCGTGTAAGTCGGCGACGGCGACTCTCTTCTGCAGAGCCGACTCGGCCTTCCTTTGCCTTGGCTGTGACTCCAAAGTTCACGCCGCCAACAAGCTCGCTTCTCG
CCATGCCCGCGTTTGGGTCTGTGAGGTCTGCGAGCAAGCTCCTGCCCATGTCACCTGCAAGGCCGACGCCGCCGCTCTCTGCCTCACTTGCGACCACGATATCCACTCTG
CTAATCCGCTTGCTCGCCGTCACGAGCGGGTACCTGTGACGCCGTTC
mRNA sequenceShow/hide mRNA sequence
TGTGACTCGTGTAAGTCGGCGACGGCGACTCTCTTCTGCAGAGCCGACTCGGCCTTCCTTTGCCTTGGCTGTGACTCCAAAGTTCACGCCGCCAACAAGCTCGCTTCTCG
CCATGCCCGCGTTTGGGTCTGTGAGGTCTGCGAGCAAGCTCCTGCCCATGTCACCTGCAAGGCCGACGCCGCCGCTCTCTGCCTCACTTGCGACCACGATATCCACTCTG
CTAATCCGCTTGCTCGCCGTCACGAGCGGGTACCTGTGACGCCGTTC
Protein sequenceShow/hide protein sequence
CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF