; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001387 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001387
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCopper transporter
Genome locationscaffold36:3800680..3801105
RNA-Seq ExpressionMS001387
SyntenyMS001387
Gene Ontology termsGO:0006878 - cellular copper ion homeostasis (biological process)
GO:0035434 - copper ion transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005375 - copper ion transmembrane transporter activity (molecular function)
InterPro domainsIPR007274 - Ctr copper transporter


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131295.1 copper transporter 5.1 [Momordica charantia]1.5e-7199.3Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPL+QSKVAGKWPAARFAEALFFGVNSAIGYLLML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

XP_022946913.1 copper transporter 5.1 [Cucurbita moschata]1.3e-5983.8Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTFYWS +VTLLI+SWRTNSWLSY LSL AC IVSVFYQY E+YRIRLKLLSCR PSPS IEVPLL+SKVAGKW   +FAE+LFFGVNSAIGYLLML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        A+MSFNGGVF A+VLGLA GYLAFRSD ED +VSVENPCACA
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

XP_022999778.1 copper transporter 5.1 [Cucurbita maxima]1.5e-6085.21Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTFYWSK+VTLLI+SWRTNSWLSY LSL AC IVSVFYQY E+YRIRLKLLSCR PSPS IEVPLL+SKVAGKW A +FAE+LFFGVNSAIGYLLML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        A+MSFNGGVFVA+VLGLA GYLAFRSD ED +VS ENPCACA
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

XP_023545540.1 copper transporter 5.1-like [Cucurbita pepo subsp. pepo]9.8e-6083.8Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTFYWS +VTLLI+SWRTNSWLSY LSL AC IVSVFYQY E+YRIRLKLLSCR PSPS I+VPLL+SKVAGKW   +FAE+LFFGVNSAIGYLLML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        A+MSFNGGVFVA+VLGLA GYLAFRSD ED +VSVENPCACA
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

XP_038886426.1 copper transporter 5.1 [Benincasa hispida]1.5e-6086.62Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTFYWSKEVTLLINSWRTNSWLSY LSL AC IVS+FYQY ENYRIRLKLL CR PSPS IE PLL+SKVAGK+ A RFA ALF+GVNSAIGYLLML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        AIMSFNGGVFVA+VLGLAIGYL FRSD EDV+VSVENPCACA
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

TrEMBL top hitse value%identityAlignment
A0A1S3BCI1 Copper transporter8.1e-6086.62Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTFYWSKEVTLLINSWRTNSWLSY LSL AC IVSVFYQY ENYRIRLKLL C  PSPS IE PLL+SKVAGK+ A RFA ALFFGVNSAIGYLLML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        AIMSFNGGVFVA+V GLAIGYL FRSD EDV VSVENPCACA
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

A0A5D3BRJ7 Copper transporter1.1e-5985.92Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTFYWSKEVTLL+NSWRTNSWLSY LSL AC IVSVFYQY ENYRIRLKLL C  PSPS IE PLL+SKVAGK+ A RFA ALFFGVNSAIGYLLML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        AIMSFNGGVFVA+V GLAIGYL FRSD EDV VSVENPCACA
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

A0A6J1BPA2 Copper transporter7.1e-7299.3Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPL+QSKVAGKWPAARFAEALFFGVNSAIGYLLML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

A0A6J1G544 Copper transporter6.2e-6083.8Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTFYWS +VTLLI+SWRTNSWLSY LSL AC IVSVFYQY E+YRIRLKLLSCR PSPS IEVPLL+SKVAGKW   +FAE+LFFGVNSAIGYLLML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        A+MSFNGGVF A+VLGLA GYLAFRSD ED +VSVENPCACA
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

A0A6J1KKN7 Copper transporter7.3e-6185.21Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTFYWSK+VTLLI+SWRTNSWLSY LSL AC IVSVFYQY E+YRIRLKLLSCR PSPS IEVPLL+SKVAGKW A +FAE+LFFGVNSAIGYLLML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        A+MSFNGGVFVA+VLGLA GYLAFRSD ED +VS ENPCACA
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

SwissProt top hitse value%identityAlignment
Q69P80 Copper transporter 5.11.1e-4062.91Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNP-------SPSAIEVP-LLQSKVAGKWPAARFAEALFFGVNS
        MMHMTFYW K+VT+L + WRT +W  Y LSL A L+ S FYQY E +RIR+KLL+   P       S  A   P LL S  AG+WP AR A A  FGVNS
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNP-------SPSAIEVP-LLQSKVAGKWPAARFAEALFFGVNS

Query:  AIGYLLMLAIMSFNGGVFVAVVLGLAIGYLAFR-SDGEDVTVSVENPCACA
         +GYLLMLA+MSFNGGVFVAVV+GLA GYLAFR SDGED+ V V+NPCACA
Subjt:  AIGYLLMLAIMSFNGGVFVAVVLGLAIGYLAFR-SDGEDVTVSVENPCACA

Q6Z0Q9 Putative copper transporter 5.25.3e-2440.91Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLK-------------LLSCRNP-SPSAIEVPLLQSKVAG----------K
        MMHM+FYW   VT+L + WRT+ W  Y  SL A  + +  YQ+ E  R+RL+               S   P  P+A +   L S   G          +
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLK-------------LLSCRNP-SPSAIEVPLLQSKVAG----------K

Query:  W-----PAARFAEALFFGVNSAIGYLLMLAIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSV-----ENPCACA
        W      AA  A A  FG+++A+GYLLMLA+MSFNGGVF+AVV GLA G+LAFR   ++    V     E+PCACA
Subjt:  W-----PAARFAEALFFGVNSAIGYLLMLAIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSV-----ENPCACA

Q8GWP3 Copper transporter 61.8e-0830.16Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTF+W K   +L + W   S   Y L L    +++V  ++  +  I       R    ++    L+Q+ V              + + + + YL+ML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRS
        A+MSFNGGVF+  + G A+G++ F S
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRS

Q93VM8 Copper transporter 51.1e-3453.38Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSC--RNPSP----SAIEVPLLQSKVAGKWPAARFAEALFFGVNSAI
        MMHMTFYW  + T+L + W+T+SWLSY L+L AC + S FYQY EN RI+ K LS   R P P    S +  PL+    +G   AA+ A  L FGVN+AI
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSC--RNPSP----SAIEVPLLQSKVAGKWPAARFAEALFFGVNSAI

Query:  GYLLMLAIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        GYLLMLA MSFNGGVF+A+V+GL  GY  FRSD      + ++PC CA
Subjt:  GYLLMLAIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

Q9FGU8 Copper transporter 31.9e-1031.25Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTF+W K   +L + W   S   Y++ L    ++S F +        L         P+++   LLQ+ V              + V +A+ YL+ML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYL-----AFRSDGEDVTVSVENPC
        A+MSFNGGVFVA + G  +G++     AFR+   +    V++ C
Subjt:  AIMSFNGGVFVAVVLGLAIGYL-----AFRSDGEDVTVSVENPC

Arabidopsis top hitse value%identityAlignment
AT2G26975.1 Ctr copper transporter family1.3e-0930.16Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTF+W K   +L + W   S   Y L L    +++V  ++  +  I       R    ++    L+Q+ V              + + + + YL+ML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYLAFRS
        A+MSFNGGVF+  + G A+G++ F S
Subjt:  AIMSFNGGVFVAVVLGLAIGYLAFRS

AT3G46900.1 copper transporter 25.4e-0829.92Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKW-PAARFAEALFFGVNSAIGYLLM
        MMHMTF+W K   +L + W   S   Y L L    +++V  ++                       P+L  +V+G    AA  A+   + + + + YL+M
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKW-PAARFAEALFFGVNSAIGYLLM

Query:  LAIMSFNGGVFVAVVLGLAIGYLAFRS
        LA+MSFN GVF+  + G  +G+  F S
Subjt:  LAIMSFNGGVFVAVVLGLAIGYLAFRS

AT5G20650.1 copper transporter 58.1e-3653.38Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSC--RNPSP----SAIEVPLLQSKVAGKWPAARFAEALFFGVNSAI
        MMHMTFYW  + T+L + W+T+SWLSY L+L AC + S FYQY EN RI+ K LS   R P P    S +  PL+    +G   AA+ A  L FGVN+AI
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSC--RNPSP----SAIEVPLLQSKVAGKWPAARFAEALFFGVNSAI

Query:  GYLLMLAIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA
        GYLLMLA MSFNGGVF+A+V+GL  GY  FRSD      + ++PC CA
Subjt:  GYLLMLAIMSFNGGVFVAVVLGLAIGYLAFRSDGEDVTVSVENPCACA

AT5G59030.1 copper transporter 13.2e-0829.25Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTF+W K   +L + W   S   Y L    CLI   F      +     LL       +     L+Q+ V              + +   + YL+ML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYL-----AFRSDGEDVTVSVENPCACA
        A+MSFN GVF+  + G A+G++      FR+  +D   +   P  CA
Subjt:  AIMSFNGGVFVAVVLGLAIGYL-----AFRSDGEDVTVSVENPCACA

AT5G59040.1 copper transporter 31.4e-1131.25Show/hide
Query:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML
        MMHMTF+W K   +L + W   S   Y++ L    ++S F +        L         P+++   LLQ+ V              + V +A+ YL+ML
Subjt:  MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLML

Query:  AIMSFNGGVFVAVVLGLAIGYL-----AFRSDGEDVTVSVENPC
        A+MSFNGGVFVA + G  +G++     AFR+   +    V++ C
Subjt:  AIMSFNGGVFVAVVLGLAIGYL-----AFRSDGEDVTVSVENPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCACATGACCTTCTACTGGAGCAAGGAGGTGACTCTCCTGATCAATTCATGGCGCACCAATTCATGGCTGAGCTACTTCCTCTCCCTGTTCGCCTGTCTCATCGT
CTCTGTTTTCTACCAGTACTCGGAGAATTACCGCATCCGTTTGAAGCTTCTTTCGTGTAGGAATCCGTCGCCGTCGGCAATCGAGGTCCCTCTCCTCCAATCCAAAGTGG
CCGGAAAGTGGCCGGCCGCCAGATTTGCCGAAGCGCTGTTTTTCGGAGTCAATTCCGCGATCGGTTACCTGTTGATGCTGGCGATCATGTCCTTCAACGGCGGAGTTTTC
GTTGCTGTTGTCTTAGGGCTCGCGATTGGTTATTTAGCGTTCAGGAGTGACGGCGAGGACGTTACTGTTAGCGTTGAAAATCCTTGTGCCTGTGCT
mRNA sequenceShow/hide mRNA sequence
ATGATGCACATGACCTTCTACTGGAGCAAGGAGGTGACTCTCCTGATCAATTCATGGCGCACCAATTCATGGCTGAGCTACTTCCTCTCCCTGTTCGCCTGTCTCATCGT
CTCTGTTTTCTACCAGTACTCGGAGAATTACCGCATCCGTTTGAAGCTTCTTTCGTGTAGGAATCCGTCGCCGTCGGCAATCGAGGTCCCTCTCCTCCAATCCAAAGTGG
CCGGAAAGTGGCCGGCCGCCAGATTTGCCGAAGCGCTGTTTTTCGGAGTCAATTCCGCGATCGGTTACCTGTTGATGCTGGCGATCATGTCCTTCAACGGCGGAGTTTTC
GTTGCTGTTGTCTTAGGGCTCGCGATTGGTTATTTAGCGTTCAGGAGTGACGGCGAGGACGTTACTGTTAGCGTTGAAAATCCTTGTGCCTGTGCT
Protein sequenceShow/hide protein sequence
MMHMTFYWSKEVTLLINSWRTNSWLSYFLSLFACLIVSVFYQYSENYRIRLKLLSCRNPSPSAIEVPLLQSKVAGKWPAARFAEALFFGVNSAIGYLLMLAIMSFNGGVF
VAVVLGLAIGYLAFRSDGEDVTVSVENPCACA