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MS001408 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001408
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionWRKY domain-containing protein
Genome locationscaffold36:3961442..3962337
RNA-Seq ExpressionMS001408
SyntenyMS001408
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0004674 - protein serine/threonine kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR003657 - WRKY domain
IPR036576 - WRKY domain superfamily
IPR044810 - WRKY transcription factor, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144271.1 probable WRKY transcription factor 50 [Cucumis sativus]1.9e-7287.74Show/hide
Query:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK
        MSYNS QHL TSESDL+EQP FEF DWMFDGWLNENSSSL +SV+YPVY+ G EVDE VG NTI QGEPSSRD GRERE+RERFAFKTKSE+EILDDGFK
Subjt:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK

Query:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        WRKYGKKMVKNSPNPRNYYKCS+EGCPVKKRVERDREDP+YVITTYEGVHTHESS
Subjt:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

XP_008445519.1 PREDICTED: probable WRKY transcription factor 50 isoform X1 [Cucumis melo]1.2e-7187.1Show/hide
Query:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK
        MSYNS QHL TSESDL+EQP FEF DWMFDGWLNENSS+L +SV+YPVY+ G EVDE VG NTI Q EPSSRD GREREVRERFAFKTKSE+EILDDGFK
Subjt:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK

Query:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        WRKYGKKMVKNSPNPRNYYKCS+EGCPVKKRVERDREDP+YVITTYEGVHTHESS
Subjt:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

XP_022131756.1 probable WRKY transcription factor 50 [Momordica charantia]4.5e-8297.42Show/hide
Query:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK
        MSYNS QHLATSESDLAEQP FEFPDWMFDGWLNENSSSLAESV+YPVYKAGEEVDEIVGINTIHQGEPSSRD GREREVRERFAFKTKSEIEILDDGFK
Subjt:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK

Query:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
Subjt:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

XP_023546261.1 probable WRKY transcription factor 50 [Cucurbita pepo subsp. pepo]8.2e-6881.94Show/hide
Query:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK
        MSYNS QHL  SE+DL EQP FEF DWMFD WL+ENS  L +S +YPVY++G E++E VG +TI QGEPSSRDSGREREVRERFAFKTKSE+E+LDDGFK
Subjt:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK

Query:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        WRKYGKKMVKNSPNPRNYYKCS+EGCPVKKRVERDREDP+YVITTYEGVHTHESS
Subjt:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

XP_038884623.1 probable WRKY transcription factor 50 isoform X2 [Benincasa hispida]5.1e-7085.81Show/hide
Query:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK
        MSYNS QHL  SESDL E+P FEF +WMFDGWLNE SSSLA+SV+YPVY+ G EVDE VG NTIHQGEPS+RDSGREREV ERFAFKTKSE+EILDDGFK
Subjt:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK

Query:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        WRKYGKK VKNSPNPRNYYKCS+EGCPVKKRVERDREDP+YVITTYEGVHTHESS
Subjt:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

TrEMBL top hitse value%identityAlignment
A0A0A0KD40 WRKY domain-containing protein9.1e-7387.74Show/hide
Query:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK
        MSYNS QHL TSESDL+EQP FEF DWMFDGWLNENSSSL +SV+YPVY+ G EVDE VG NTI QGEPSSRD GRERE+RERFAFKTKSE+EILDDGFK
Subjt:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK

Query:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        WRKYGKKMVKNSPNPRNYYKCS+EGCPVKKRVERDREDP+YVITTYEGVHTHESS
Subjt:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

A0A1S3BCG1 probable WRKY transcription factor 50 isoform X15.9e-7287.1Show/hide
Query:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK
        MSYNS QHL TSESDL+EQP FEF DWMFDGWLNENSS+L +SV+YPVY+ G EVDE VG NTI Q EPSSRD GREREVRERFAFKTKSE+EILDDGFK
Subjt:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK

Query:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        WRKYGKKMVKNSPNPRNYYKCS+EGCPVKKRVERDREDP+YVITTYEGVHTHESS
Subjt:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

A0A5A7VG90 Putative WRKY transcription factor 50 isoform X15.9e-7287.1Show/hide
Query:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK
        MSYNS QHL TSESDL+EQP FEF DWMFDGWLNENSS+L +SV+YPVY+ G EVDE VG NTI Q EPSSRD GREREVRERFAFKTKSE+EILDDGFK
Subjt:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK

Query:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        WRKYGKKMVKNSPNPRNYYKCS+EGCPVKKRVERDREDP+YVITTYEGVHTHESS
Subjt:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

A0A5D3BLP6 Putative WRKY transcription factor 50 isoform X11.5e-6776.14Show/hide
Query:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSR---------------------DSGRERE
        MSYNS QHL TSESDL+EQP FEF DWMFDGWLNENSS+L +SV+YPVY+ G EVDE VG NTI Q EPSS                      D GRERE
Subjt:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSR---------------------DSGRERE

Query:  VRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        VRERFAFKTKSE+EILDDGFKWRKYGKKMVKNSPNPRNYYKCS+EGCPVKKRVERDREDP+YVITTYEGVHTHESS
Subjt:  VRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

A0A6J1BQD9 probable WRKY transcription factor 502.2e-8297.42Show/hide
Query:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK
        MSYNS QHLATSESDLAEQP FEFPDWMFDGWLNENSSSLAESV+YPVYKAGEEVDEIVGINTIHQGEPSSRD GREREVRERFAFKTKSEIEILDDGFK
Subjt:  MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFK

Query:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
Subjt:  WRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

SwissProt top hitse value%identityAlignment
Q8VWQ5 Probable WRKY transcription factor 504.4e-3270.24Show/hide
Query:  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHES
        +++   +++++ R AFKT+SE+E+LDDGFKWRKYGKKMVKNSP+PRNYYKCS++GCPVKKRVERDR+DP +VITTYEG H H S
Subjt:  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHES

Q93WU9 Probable WRKY transcription factor 515.0e-2867.86Show/hide
Query:  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHES
        S++S + +E   R AF+T+S+I+++DDGFKWRKYGKK VKN+ N RNYYKCS EGC VKKRVERD +D  YVITTYEGVH HES
Subjt:  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHES

Q9FGZ4 Probable WRKY transcription factor 489.8e-2447.01Show/hide
Query:  NSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERD
        N ++  + V     + G++  E  G     + +  ++   RE     RFAF TKS+I+ LDDG++WRKYG+K VKNSP PR+YY+C+  GC VKKRVER 
Subjt:  NSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERD

Query:  REDPRYVITTYEGVHTH
         +DP  V+TTYEG HTH
Subjt:  REDPRYVITTYEGVHTH

Q9S763 Probable WRKY transcription factor 457.5e-2453.06Show/hide
Query:  VDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTH
        VD      T  + +P S+   +ERE   R+AF+T+S+++ILDDG++WRKYG+K VKN+P PR+YYKC+ EGC VKK+V+R   D   V+TTY+GVHTH
Subjt:  VDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTH

Q9SVB7 Probable WRKY transcription factor 134.9e-2363.29Show/hide
Query:  REVRE-RFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        R+VRE RF FKT SE+++LDDG++WRKYG+K+VKN+ +PR+YY+C+ + C VKKRVER  +DPR VITTYEG H H  S
Subjt:  REVRE-RFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

Arabidopsis top hitse value%identityAlignment
AT3G01970.1 WRKY DNA-binding protein 455.3e-2553.06Show/hide
Query:  VDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTH
        VD      T  + +P S+   +ERE   R+AF+T+S+++ILDDG++WRKYG+K VKN+P PR+YYKC+ EGC VKK+V+R   D   V+TTY+GVHTH
Subjt:  VDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTH

AT4G39410.1 WRKY DNA-binding protein 133.5e-2463.29Show/hide
Query:  REVRE-RFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS
        R+VRE RF FKT SE+++LDDG++WRKYG+K+VKN+ +PR+YY+C+ + C VKKRVER  +DPR VITTYEG H H  S
Subjt:  REVRE-RFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS

AT5G26170.1 WRKY DNA-binding protein 503.1e-3370.24Show/hide
Query:  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHES
        +++   +++++ R AFKT+SE+E+LDDGFKWRKYGKKMVKNSP+PRNYYKCS++GCPVKKRVERDR+DP +VITTYEG H H S
Subjt:  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHES

AT5G49520.1 WRKY DNA-binding protein 487.0e-2547.01Show/hide
Query:  NSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERD
        N ++  + V     + G++  E  G     + +  ++   RE     RFAF TKS+I+ LDDG++WRKYG+K VKNSP PR+YY+C+  GC VKKRVER 
Subjt:  NSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERD

Query:  REDPRYVITTYEGVHTH
         +DP  V+TTYEG HTH
Subjt:  REDPRYVITTYEGVHTH

AT5G64810.1 WRKY DNA-binding protein 513.6e-2967.86Show/hide
Query:  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHES
        S++S + +E   R AF+T+S+I+++DDGFKWRKYGKK VKN+ N RNYYKCS EGC VKKRVERD +D  YVITTYEGVH HES
Subjt:  SRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTACAATAGTAAACAGCACCTCGCTACGTCTGAGAGCGATCTTGCCGAGCAGCCCGAGTTCGAGTTTCCGGACTGGATGTTCGATGGGTGGCTCAATGAAAACTC
TTCGTCTCTGGCTGAGTCGGTCGTGTACCCGGTTTATAAAGCGGGCGAAGAAGTCGATGAGATTGTTGGGATCAATACCATCCACCAAGGAGAGCCTAGCAGCAGAGACA
GTGGGAGAGAGAGGGAAGTTAGAGAGAGATTTGCATTCAAGACAAAATCAGAAATTGAGATTCTAGATGATGGGTTCAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAG
AACAGCCCAAATCCGAGGAACTATTACAAATGCTCAATCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAGAGAGACCGAGAGGATCCGAGATATGTGATTACGACGTACGA
GGGTGTTCATACCCATGAAAGTTCT
mRNA sequenceShow/hide mRNA sequence
ATGTCTTACAATAGTAAACAGCACCTCGCTACGTCTGAGAGCGATCTTGCCGAGCAGCCCGAGTTCGAGTTTCCGGACTGGATGTTCGATGGGTGGCTCAATGAAAACTC
TTCGTCTCTGGCTGAGTCGGTCGTGTACCCGGTTTATAAAGCGGGCGAAGAAGTCGATGAGATTGTTGGGATCAATACCATCCACCAAGGAGAGCCTAGCAGCAGAGACA
GTGGGAGAGAGAGGGAAGTTAGAGAGAGATTTGCATTCAAGACAAAATCAGAAATTGAGATTCTAGATGATGGGTTCAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAG
AACAGCCCAAATCCGAGGAACTATTACAAATGCTCAATCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAGAGAGACCGAGAGGATCCGAGATATGTGATTACGACGTACGA
GGGTGTTCATACCCATGAAAGTTCT
Protein sequenceShow/hide protein sequence
MSYNSKQHLATSESDLAEQPEFEFPDWMFDGWLNENSSSLAESVVYPVYKAGEEVDEIVGINTIHQGEPSSRDSGREREVRERFAFKTKSEIEILDDGFKWRKYGKKMVK
NSPNPRNYYKCSIEGCPVKKRVERDREDPRYVITTYEGVHTHESS