CuGenDBv2

Gene ID	MS001414
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Eukaryotic initiation factor 4A
Genome location	scaffold36:3995575..3995874
RNA-Seq Expression	MS001414
Synteny	MS001414
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003724 - RNA helicase activity (molecular function) GO:0003743 - translation initiation factor activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	IPR001650 - Helicase, C-terminal IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

ATJ04328.1 eukaryotic initiation factor 4A [Carex duriuscula subsp. rigescens]

3.6e-48

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

KAG8495451.1 hypothetical protein CXB51_013140 [Gossypium anomalum]

1.6e-48

100

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

OAY82321.1 Eukaryotic initiation factor 4A-15 [Ananas comosus]

3.6e-48

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

XP_022131985.1 eukaryotic initiation factor 4A-15 [Momordica charantia]

1.6e-48

100

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

XP_022715179.1 eukaryotic initiation factor 4A-1 isoform X2 [Durio zibethinus]

3.6e-48

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

TrEMBL top hits

e value

%identity

Alignment

A0A1U8PJ67 eukaryotic initiation factor 4A-9

1.7e-48

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

A0A6J1BR72 eukaryotic initiation factor 4A-15

7.7e-49

100

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

D2X5K2 DEAD-box RNA helicase-like protein

1.7e-48

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

K3YSX2 Uncharacterized protein

1.7e-48

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

M5VPZ0 Uncharacterized protein

1.7e-48

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

SwissProt top hits

e value

%identity

Alignment

P41382 Eukaryotic initiation factor 4A-10

4.7e-51

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Q40467 Eukaryotic initiation factor 4A-14

4.7e-51

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Q40470 Eukaryotic initiation factor 4A-7

1.0e-50

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMR+RDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Q41741 Eukaryotic initiation factor 4A

4.7e-51

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Q6Z2Z4 Eukaryotic initiation factor 4A-3

4.7e-51

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Arabidopsis top hits

e value

%identity

Alignment

AT1G54270.1 eif4a-2

9.6e-52

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

AT1G54270.2 eif4a-2

9.6e-52

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

AT1G72730.1 DEA(D/H)-box RNA helicase family protein

9.6e-52

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

AT3G13920.1 eukaryotic translation initiation factor 4A1

9.6e-52

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

AT3G13920.2 eukaryotic translation initiation factor 4A1

9.6e-52

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Query:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF
        VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN+RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIGRSGRFGRKGVAINF
Subjt:  VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

Sequences

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CDS sequence

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GTCATATTTGTGAATACCAGGCGCAAGGTAGATTGGCTTACAGATAAGATGCGCAGCCGTGACCACACTGTTTCTGCCACACATGGAGACATGGACCAAAACTCTAGAGA
TATCATAATGCGGGAGTTTCGGTCTGGTTCATCTCGTGTCCTCATTACTACTGATCTCTTAGCCAGAGGAATTGATGTCCAACAAGTTTCTCTTGTGATAAATTACGATC
TCCCTACTCAGCCAGAGAACTACCTCCATCGAATTGGTCGTAGTGGACGATTTGGAAGGAAGGGTGTTGCCATCAATTTC

mRNA sequence

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Protein sequence

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VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF

MS001414 (gene) of Bitter gourd (TR) v1 genome