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MS001415 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001415
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationscaffold36:3997555..3997893
RNA-Seq ExpressionMS001415
SyntenyMS001415
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064729.1 hypothetical protein E6C27_scaffold82G00330 [Cucumis melo var. makuwa]9.3e-2969.57Show/hide
Query:  MDDDRRPSY-RASSMQIESYYGPPRPPPPPYDLTTHSASSHVSGKEVNLKKGKSTSRSSSSSSKSWRF-ADPEFQRKKRVASYKMYSVEGKMKGSFRKSF
        MDDDRR SY  +SSM+IE YYGP                   S  +V++KKGKST   S SSSKSWRF ADPEFQRKKRVASYKMYSVEGKMKGSFRKSF
Subjt:  MDDDRRPSY-RASSMQIESYYGPPRPPPPPYDLTTHSASSHVSGKEVNLKKGKSTSRSSSSSSKSWRF-ADPEFQRKKRVASYKMYSVEGKMKGSFRKSF

Query:  RWLKDKYTQMLYGWW
        RWLKDKYTQMLYGWW
Subjt:  RWLKDKYTQMLYGWW

KAG7029545.1 hypothetical protein SDJN02_07884, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-3068.14Show/hide
Query:  MDDDRRPSYRASSMQIESYYGPPRPPPPPYDLTTHSASSHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRW
        MDDDRR SY +SSMQIESYYGPP+   P                      GK   RSS SSSKS++F+DPEFQRKKRVASYKMYSVEGKMKGSFRKSFRW
Subjt:  MDDDRRPSYRASSMQIESYYGPPRPPPPPYDLTTHSASSHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRW

Query:  LKDKYTQMLYGWW
        LKDKYTQMLYGWW
Subjt:  LKDKYTQMLYGWW

XP_015884421.1 uncharacterized protein LOC107420071 [Ziziphus jujuba]8.4e-3065.18Show/hide
Query:  SYRASSMQIESYYGPPRPPPPPYDLTTHSAS------SHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWL
        SY    MQ+E+YYGPP   P  YDL ++SAS       + + +++  KKGKST   S SSS+SW F DPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWL
Subjt:  SYRASSMQIESYYGPPRPPPPPYDLTTHSAS------SHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWL

Query:  KDKYTQMLYGWW
        KDKYTQ++YGWW
Subjt:  KDKYTQMLYGWW

XP_021596675.1 uncharacterized protein LOC110603285 [Manihot esculenta]1.9e-2961.54Show/hide
Query:  MDDDRRP-----SYRASSMQIESYYGPPRPP--PPPYDLTTHSAS--------SHVSGKEVNLKKGKSTS--RSSSSSSKSWRFADPEFQRKKRVASYKM
        MDD  R      SY +++MQ+ESYYGPPRPP     YDL ++SAS        ++ + K+  LKKGK  S   SSSSSSKSW  ADPEFQRKKRVASYKM
Subjt:  MDDDRRP-----SYRASSMQIESYYGPPRPP--PPPYDLTTHSAS--------SHVSGKEVNLKKGKSTS--RSSSSSSKSWRFADPEFQRKKRVASYKM

Query:  YSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
        YSVEGK+KGSFR+SFRWLKD +TQ++YGWW
Subjt:  YSVEGKMKGSFRKSFRWLKDKYTQMLYGWW

XP_021910568.1 uncharacterized protein LOC110824289 [Carica papaya]1.1e-2962.6Show/hide
Query:  DDDRRPSY-RASSMQIESYYGPPRPPP-PPYDLTTHSAS---------SHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKM
        D +R  SY   ++MQIESYYGPPRPPP   YDL  +SAS         ++ + K+   KKGK  +  S S SKSW FADPEFQRKKRVASYKMYSVEGK+
Subjt:  DDDRRPSY-RASSMQIESYYGPPRPPP-PPYDLTTHSAS---------SHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKM

Query:  KGSFRKSFRWLKDKYTQMLYGWW
        KGSFRKSFRWLKD+Y+Q++YGWW
Subjt:  KGSFRKSFRWLKDKYTQMLYGWW

TrEMBL top hitse value%identityAlignment
A0A251IZ93 Uncharacterized protein9.1e-3061.54Show/hide
Query:  MDDDRRP-----SYRASSMQIESYYGPPRPP--PPPYDLTTHSAS--------SHVSGKEVNLKKGKSTS--RSSSSSSKSWRFADPEFQRKKRVASYKM
        MDD  R      SY +++MQ+ESYYGPPRPP     YDL ++SAS        ++ + K+  LKKGK  S   SSSSSSKSW  ADPEFQRKKRVASYKM
Subjt:  MDDDRRP-----SYRASSMQIESYYGPPRPP--PPPYDLTTHSAS--------SHVSGKEVNLKKGKSTS--RSSSSSSKSWRFADPEFQRKKRVASYKM

Query:  YSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
        YSVEGK+KGSFR+SFRWLKD +TQ++YGWW
Subjt:  YSVEGKMKGSFRKSFRWLKDKYTQMLYGWW

A0A2P5FE02 Uncharacterized protein2.9e-2865.25Show/hide
Query:  DDDRRPSYRASSMQIESYYGPP--RPPPPPYDLTTHSAS---SHVSGKEVNLKKGKSTSRSSSSSSKSWRF-ADPEFQRKKRVASYKMYSVEGKMKGSFR
        D  R  SY +  MQ++ YYGPP   P    +DL ++SAS   + +  +++ LKKGKS S  SSSSSKSW F  DPEFQRKKRVASYKMYSVEGKMKGSFR
Subjt:  DDDRRPSYRASSMQIESYYGPP--RPPPPPYDLTTHSAS---SHVSGKEVNLKKGKSTSRSSSSSSKSWRF-ADPEFQRKKRVASYKMYSVEGKMKGSFR

Query:  KSFRWLKDKYTQMLYGWW
        KSFRWLKDKYTQ+LYGWW
Subjt:  KSFRWLKDKYTQMLYGWW

A0A5A7VGY1 Uncharacterized protein4.5e-2969.57Show/hide
Query:  MDDDRRPSY-RASSMQIESYYGPPRPPPPPYDLTTHSASSHVSGKEVNLKKGKSTSRSSSSSSKSWRF-ADPEFQRKKRVASYKMYSVEGKMKGSFRKSF
        MDDDRR SY  +SSM+IE YYGP                   S  +V++KKGKST   S SSSKSWRF ADPEFQRKKRVASYKMYSVEGKMKGSFRKSF
Subjt:  MDDDRRPSY-RASSMQIESYYGPPRPPPPPYDLTTHSASSHVSGKEVNLKKGKSTSRSSSSSSKSWRF-ADPEFQRKKRVASYKMYSVEGKMKGSFRKSF

Query:  RWLKDKYTQMLYGWW
        RWLKDKYTQMLYGWW
Subjt:  RWLKDKYTQMLYGWW

A0A6A6KF30 Uncharacterized protein1.0e-2864.91Show/hide
Query:  SYRASSMQIESYYGPPRPPPPPYDLTTHSAS--------SHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFR
        SY A +MQ+ESYYGPPRPP   YDL ++SAS        +  + K   LKKGKSTS  SS SSKSW  +DPEFQRKKRVASYKMY+VEGK+K SFR+SFR
Subjt:  SYRASSMQIESYYGPPRPPPPPYDLTTHSAS--------SHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFR

Query:  WLKDKYTQMLYGWW
        WLKDKY+++ YGWW
Subjt:  WLKDKYTQMLYGWW

A0A6P3ZT47 uncharacterized protein LOC1074200714.1e-3065.18Show/hide
Query:  SYRASSMQIESYYGPPRPPPPPYDLTTHSAS------SHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWL
        SY    MQ+E+YYGPP   P  YDL ++SAS       + + +++  KKGKST   S SSS+SW F DPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWL
Subjt:  SYRASSMQIESYYGPPRPPPPPYDLTTHSAS------SHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWL

Query:  KDKYTQMLYGWW
        KDKYTQ++YGWW
Subjt:  KDKYTQMLYGWW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)1.5e-0835.79Show/hide
Query:  PRPPPPPYDLTTHSASSHVSGKEVNLKKGKSTSRSSSSS---SKSWR-FADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
        P    PP  + ++S S++ + +   + +  S ++S  S+    K ++   + E QRKKRVASY +Y VEG++KGS +KSF+W K+  +  +YG W
Subjt:  PRPPPPPYDLTTHSASSHVSGKEVNLKKGKSTSRSSSSS---SKSWR-FADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW

AT2G19460.1 Protein of unknown function (DUF3511)1.5e-1341.88Show/hide
Query:  MDDDRRPSY---RASSMQIESYYGPPRPPPP-----PYDLTTHSASSHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKG
        M+D R  SY   R S +Q  S +     P         DL ++S S   +     + + ++  +  SSSS SW F DP+ QRKKRV SY+ Y+VEGK+KG
Subjt:  MDDDRRPSY---RASSMQIESYYGPPRPPPP-----PYDLTTHSASSHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKG

Query:  SFRKSFRWLKDKYTQML
        SFRKSF+W+KDK  ++L
Subjt:  SFRKSFRWLKDKYTQML

AT3G13910.1 Protein of unknown function (DUF3511)2.6e-1353.85Show/hide
Query:  SHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKD
        S  +  ++ +KK KS   +  ++S+SW F+DPE +RK+RVA YK+YSVE KMKGS RKSF+W KD
Subjt:  SHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKD

AT3G62640.1 Protein of unknown function (DUF3511)2.3e-0944.07Show/hide
Query:  STSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYG
        STS++ ++++  WR  D E +RKKR+A+YK Y++EGK+K + +K F W+KD+Y+ +++G
Subjt:  STSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYG

AT5G11970.1 Protein of unknown function (DUF3511)5.8e-2151.33Show/hide
Query:  DDDRRPSYRASSMQIESYYGPPRPPPPPYDLTTHSASSHVSGKEV-NLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRW
        D  R+  Y    MQI+ Y+G         D  ++SAS       + ++KK KS +R     SKSW   DPE QRKKRVASYKMY VEGK+KGSFR SFRW
Subjt:  DDDRRPSYRASSMQIESYYGPPRPPPPPYDLTTHSASSHVSGKEV-NLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRW

Query:  LKDKYTQMLYGWW
        LK +YTQ++YGWW
Subjt:  LKDKYTQMLYGWW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATGACAGAAGACCTTCTTATCGAGCATCGTCGATGCAGATTGAGAGCTATTATGGGCCCCCAAGGCCACCCCCTCCCCCTTATGACCTCACAACCCACAGTGC
TTCCAGCCATGTTTCAGGGAAGGAAGTGAATCTGAAGAAAGGGAAAAGCACTTCTAGATCTTCTTCTTCTTCTTCCAAATCATGGCGGTTCGCAGACCCCGAGTTTCAGA
GGAAGAAGAGGGTCGCCAGCTACAAGATGTACTCTGTGGAAGGGAAGATGAAGGGCTCCTTCAGAAAGAGCTTCAGATGGCTCAAGGATAAGTACACCCAAATGCTTTAT
GGTTGGTGG
mRNA sequenceShow/hide mRNA sequence
ATGGATGATGACAGAAGACCTTCTTATCGAGCATCGTCGATGCAGATTGAGAGCTATTATGGGCCCCCAAGGCCACCCCCTCCCCCTTATGACCTCACAACCCACAGTGC
TTCCAGCCATGTTTCAGGGAAGGAAGTGAATCTGAAGAAAGGGAAAAGCACTTCTAGATCTTCTTCTTCTTCTTCCAAATCATGGCGGTTCGCAGACCCCGAGTTTCAGA
GGAAGAAGAGGGTCGCCAGCTACAAGATGTACTCTGTGGAAGGGAAGATGAAGGGCTCCTTCAGAAAGAGCTTCAGATGGCTCAAGGATAAGTACACCCAAATGCTTTAT
GGTTGGTGG
Protein sequenceShow/hide protein sequence
MDDDRRPSYRASSMQIESYYGPPRPPPPPYDLTTHSASSHVSGKEVNLKKGKSTSRSSSSSSKSWRFADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLY
GWW