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MS001432 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001432
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHomeobox domain-containing protein
Genome locationscaffold36:4098416..4098574
RNA-Seq ExpressionMS001432
SyntenyMS001432
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0016020 - membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060995.1 hypothetical protein E6C27_scaffold501G001300 [Cucumis melo var. makuwa]3.1e-1994.34Show/hide
Query:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT
        MVLRRPGRNRSF+RENPDILIMMIAVDQIIRG EQDKGDG ERKGMGPLKPAT
Subjt:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT

KAF3975862.1 hypothetical protein CMV_000902 [Castanea mollissima]1.8e-1169.81Show/hide
Query:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT
        MVLRRPG NRS +RENPDILIMM A  QI+RG  +DKG+  E++GMGPLKP T
Subjt:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT

KAG6674396.1 hypothetical protein I3842_15G039000 [Carya illinoinensis]1.6e-1069.23Show/hide
Query:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPA
        M LRRPG NRS +RENPDILI+MIA +QI+RG  +DKGD  +R+GMGPLK A
Subjt:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPA

KAG7029268.1 hypothetical protein SDJN02_07606, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-1890.57Show/hide
Query:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT
        MVLRR GRNRSF+RENPDILIMMIAVDQIIRG EQDKGDG ERKGMGPLKP T
Subjt:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT

KGN62652.2 hypothetical protein Csa_018750 [Cucumis sativus]7.0e-1992.45Show/hide
Query:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT
        MVLRRPGRNR+F+RENPDILIMMIAVDQIIRG EQDKGDG ERKGMGPLKPAT
Subjt:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT

TrEMBL top hitse value%identityAlignment
A0A0A0LN23 Uncharacterized protein3.4e-1992.45Show/hide
Query:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT
        MVLRRPGRNR+F+RENPDILIMMIAVDQIIRG EQDKGDG ERKGMGPLKPAT
Subjt:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT

A0A0R0JC99 Uncharacterized protein1.6e-0869.81Show/hide
Query:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT
        M LR P  NRS +RENPDIL MMIA  QIIRG E DK D  ERK MGP+KPAT
Subjt:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT

A0A5A7V591 Uncharacterized protein1.5e-1994.34Show/hide
Query:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT
        MVLRRPGRNRSF+RENPDILIMMIAVDQIIRG EQDKGDG ERKGMGPLKPAT
Subjt:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT

A0A6A4PQS0 Putative transcription factor Homeodomain-TALE-BEL family7.1e-0968.52Show/hide
Query:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAER-KGMGPLKPAT
        M LR    NRS +RENPDILIMMIA  QIIRG E+DK D  ER K MGP+KPAT
Subjt:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAER-KGMGPLKPAT

A0A6A5PA14 Homeobox domain-containing protein7.1e-0968.52Show/hide
Query:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAER-KGMGPLKPAT
        M LR    NRS +RENPDILIMMIA  QIIRG E+DK D  ER K MGP+KPAT
Subjt:  MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAER-KGMGPLKPAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTGAGAAGACCTGGCAGGAACAGGAGTTTCGACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGTGGATCAGATAATAAGAGGTCGTGAGCAGGACAA
AGGAGATGGCGCAGAGAGGAAAGGCATGGGCCCTCTAAAGCCTGCAACA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTGAGAAGACCTGGCAGGAACAGGAGTTTCGACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGTGGATCAGATAATAAGAGGTCGTGAGCAGGACAA
AGGAGATGGCGCAGAGAGGAAAGGCATGGGCCCTCTAAAGCCTGCAACA
Protein sequenceShow/hide protein sequence
MVLRRPGRNRSFDRENPDILIMMIAVDQIIRGREQDKGDGAERKGMGPLKPAT