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MS001441 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001441
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionArabinogalactan peptide
Genome locationscaffold36:4165266..4165451
RNA-Seq ExpressionMS001441
SyntenyMS001441
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585732.1 CXXC motif containing zinc binding protein, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0881.82Show/hide
Query:  SLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
        SL+ALIALI AVAS AAQEAPAPSPASPA SIAPS  SAC A FVAL  GSTLRI
Subjt:  SLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]2.3e-0557.81Show/hide
Query:  MAAVSKASLIALIALIFAVASCA---AQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLR
        MAAVSK S +AL+A++F V S A   + E+PAP+PASPA S+ PS+  AC+ AFVAL FGS L+
Subjt:  MAAVSKASLIALIALIFAVASCA---AQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLR
KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1282.26Show/hide
Query:  MAAVSKASLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
        MA VS+ASL+ALIA++FAVAS AA EAPAPSPASPA SIAPS  SAC+AAFVALAFGSTLRI
Subjt:  MAAVSKASLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-0557.81Show/hide
Query:  MAAVSKASLIALIALIFAVASCA---AQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLR
        MAAVSK S +AL+A++F V S A   + E+PAP+PASPA S+ PS+  AC+ AFVAL FGS L+
Subjt:  MAAVSKASLIALIALIFAVASCA---AQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLR
KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]6.7e-1383.87Show/hide
Query:  MAAVSKASLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
        MAA+SK SL+ALIALIFA++S AAQEAPAPSPASPA SIAPS  SACLAAF+ALAFGSTLRI
Subjt:  MAAVSKASLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein3.2e-1383.87Show/hide
Query:  MAAVSKASLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
        MAA+SK SL+ALIALIFA++S AAQEAPAPSPASPA SIAPS  SACLAAF+ALAFGSTLRI
Subjt:  MAAVSKASLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
A0A2P5DTQ4 Arabinogalactan peptide3.6e-0460Show/hide
Query:  AAVSKASLIALIALIFAVASCA----AQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
        A+ S ASLI L+A+I  V S      A EAPAPSPASPA +I+PS  SACLAA VAL FGS +R+
Subjt:  AAVSKASLIALIALIFAVASCA----AQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
A0A2P5EL16 Arabinogalactan peptide2.8e-0461.29Show/hide
Query:  SKASLIALIALIFAVASCA----AQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
        S ASLI L+A+I  V S      A EAPAPSPASPA +I+PS  SACLAA VAL FGS +R+
Subjt:  SKASLIALIALIFAVASCA----AQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
A0A5N5HNG8 Uncharacterized protein8.0e-0461.9Show/hide
Query:  AVSKA-SLIALIALIFAVASC--AAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
        AVSKA S++AL+A++FAV S   AAQE+PAPSP SPA SI PS  SA +A    LAFGS LR+
Subjt:  AVSKA-SLIALIALIFAVASC--AAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
Q96504 CRG163.2e-0557.81Show/hide
Query:  MAAVSKASLIALIALIFAVASCA---AQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLR
        MAAVSK S +AL+A++FAV S A   + E+PAP PASPA S+ PS+  AC+ AF+AL FGS L+
Subjt:  MAAVSKASLIALIALIFAVASCA---AQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLR
SwissProt top hitse value%identityAlignment
Q9LYF6 Arabinogalactan protein 153.5e-0451.67Show/hide
Query:  AVSKASLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
        A+SKAS++ L+ +I +V + A  EAPAPSP S + +I+ S  SA +AA  AL FGS LRI
Subjt:  AVSKASLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
Arabidopsis top hitse value%identityAlignment
AT5G11740.1 arabinogalactan protein 152.5e-0551.67Show/hide
Query:  AVSKASLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI
        A+SKAS++ L+ +I +V + A  EAPAPSP S + +I+ S  SA +AA  AL FGS LRI
Subjt:  AVSKASLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGTTTCCAAGGCTTCTCTCATTGCTCTCATCGCCCTCATCTTCGCCGTCGCTTCCTGCGCCGCTCAGGAGGCTCCGGCGCCGAGCCCTGCTTCCCCTGCTTT
CTCCATTGCTCCTTCCGTTGGCTCCGCTTGTCTCGCCGCCTTCGTCGCTCTCGCCTTCGGATCTACTCTCAGGATC
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGTTTCCAAGGCTTCTCTCATTGCTCTCATCGCCCTCATCTTCGCCGTCGCTTCCTGCGCCGCTCAGGAGGCTCCGGCGCCGAGCCCTGCTTCCCCTGCTTT
CTCCATTGCTCCTTCCGTTGGCTCCGCTTGTCTCGCCGCCTTCGTCGCTCTCGCCTTCGGATCTACTCTCAGGATC
Protein sequenceShow/hide protein sequence
MAAVSKASLIALIALIFAVASCAAQEAPAPSPASPAFSIAPSVGSACLAAFVALAFGSTLRI