CuGenDBv2

Gene ID	MS001452
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor RAX3-like
Genome location	scaffold36:4250314..4251778
RNA-Seq Expression	MS001452
Synteny	MS001452
Gene Ontology terms	NA
InterPro domains	IPR001005 - SANT/Myb domain IPR009057 - Homeobox-like domain superfamily IPR017930 - Myb domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022132054.1 transcription factor RAX3-like [Momordica charantia]

2.6e-143

95.8

Show/hide

Query:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK
        G  +  P+K+   RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK
Subjt:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK

Query:  QQMKIRSESNNTTHGAENNSAVFSLNDAHNNIIPYWPQFPTAPHFNTIPSSDHMNPNENLTKFGVQFTEETLYNPNGYGNFLPIIEGQGQSSSQMGDQLE
        QQMKIRSESNNTTHGAENNSAVFSLNDAHNNIIPYWPQFPTAPHFNTIPSSDHMNPNENLTKFG QFTEETLYNPNGYGNFLPIIEGQGQSSSQMGDQLE
Subjt:  QQMKIRSESNNTTHGAENNSAVFSLNDAHNNIIPYWPQFPTAPHFNTIPSSDHMNPNENLTKFGVQFTEETLYNPNGYGNFLPIIEGQGQSSSQMGDQLE

Query:  NYNNNNMGFDDPRRVLCSGLEFLYGDQIHGCEMGSLISSSCPSNYEAMLQDLSTTQEFSANF
        NYNNNNMGFDDPRRVLCSGLEFLYGDQIHGCEMGSLISSSCPSNYEAMLQDLSTTQEFSANF
Subjt:  NYNNNNMGFDDPRRVLCSGLEFLYGDQIHGCEMGSLISSSCPSNYEAMLQDLSTTQEFSANF

XP_022962257.1 transcription factor RAX3-like isoform X1 [Cucurbita moschata]

3.3e-85

66.44

Show/hide

Query:  GTGLLCPKKL----RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRR
        G  +  P+K+    RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE    QQATRR
Subjt:  GTGLLCPKKL----RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRR

Query:  GNALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYG
        GNALK  QQMK   E+NN  T +GAENN+ A+FSLN+AHNN IPYWP   Q P  PH+N  ++P+SD +NP ENL+KFG Q   EE+ Y     N NGYG
Subjt:  GNALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYG

Query:  NFLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF
        +FLPI+  QGQSS+QM + ++ENYN    G++DPRRVLC GLEFL+ D  QI     HGC+MGSL SSSCP+    MLQDL TT ++++A F
Subjt:  NFLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF

XP_022962258.1 transcription factor RAX3-like isoform X2 [Cucurbita moschata]

2.5e-85

66.67

Show/hide

Query:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRRG
        G  +  P+K+   RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE    QQATRRG
Subjt:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRRG

Query:  NALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYGN
        NALK  QQMK   E+NN  T +GAENN+ A+FSLN+AHNN IPYWP   Q P  PH+N  ++P+SD +NP ENL+KFG Q   EE+ Y     N NGYG+
Subjt:  NALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYGN

Query:  FLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF
        FLPI+  QGQSS+QM + ++ENYN    G++DPRRVLC GLEFL+ D  QI     HGC+MGSL SSSCP+    MLQDL TT ++++A F
Subjt:  FLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF

XP_022996950.1 transcription factor RAX3-like isoform X1 [Cucurbita maxima]

1.0e-86

67.47

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Query:  GTGLLCPKKL----RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRR
        G  +  P+K+    RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE    QQATRR
Subjt:  GTGLLCPKKL----RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRR

Query:  GNALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYG
        GNALK  QQMK  SE+NN  T +GAENN+ A+FSLN+AHNN IPYWP   Q P APH+N  ++P+SD +NP ENL+KFG Q   EE+ Y     N NGYG
Subjt:  GNALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYG

Query:  NFLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF
        +FLPI+  QGQSS+QM + ++ENYN    G++DPRRVLC GLEFL+ D  QI     HGCEMGSL SSSCP+    MLQDL TT ++++A F
Subjt:  NFLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF

XP_022996951.1 transcription factor RAX3-like isoform X2 [Cucurbita maxima]

7.8e-87

67.7

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Query:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRRG
        G  +  P+K+   RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE    QQATRRG
Subjt:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRRG

Query:  NALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYGN
        NALK  QQMK  SE+NN  T +GAENN+ A+FSLN+AHNN IPYWP   Q P APH+N  ++P+SD +NP ENL+KFG Q   EE+ Y     N NGYG+
Subjt:  NALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYGN

Query:  FLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF
        FLPI+  QGQSS+QM + ++ENYN    G++DPRRVLC GLEFL+ D  QI     HGCEMGSL SSSCP+    MLQDL TT ++++A F
Subjt:  FLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BRZ5 transcription factor RAX3-like

1.3e-143

95.8

Show/hide

Query:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK
        G  +  P+K+   RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK
Subjt:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK

Query:  QQMKIRSESNNTTHGAENNSAVFSLNDAHNNIIPYWPQFPTAPHFNTIPSSDHMNPNENLTKFGVQFTEETLYNPNGYGNFLPIIEGQGQSSSQMGDQLE
        QQMKIRSESNNTTHGAENNSAVFSLNDAHNNIIPYWPQFPTAPHFNTIPSSDHMNPNENLTKFG QFTEETLYNPNGYGNFLPIIEGQGQSSSQMGDQLE
Subjt:  QQMKIRSESNNTTHGAENNSAVFSLNDAHNNIIPYWPQFPTAPHFNTIPSSDHMNPNENLTKFGVQFTEETLYNPNGYGNFLPIIEGQGQSSSQMGDQLE

Query:  NYNNNNMGFDDPRRVLCSGLEFLYGDQIHGCEMGSLISSSCPSNYEAMLQDLSTTQEFSANF
        NYNNNNMGFDDPRRVLCSGLEFLYGDQIHGCEMGSLISSSCPSNYEAMLQDLSTTQEFSANF
Subjt:  NYNNNNMGFDDPRRVLCSGLEFLYGDQIHGCEMGSLISSSCPSNYEAMLQDLSTTQEFSANF

A0A6J1HC82 transcription factor RAX3-like isoform X1

1.6e-85

66.44

Show/hide

Query:  GTGLLCPKKL----RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRR
        G  +  P+K+    RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE    QQATRR
Subjt:  GTGLLCPKKL----RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRR

Query:  GNALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYG
        GNALK  QQMK   E+NN  T +GAENN+ A+FSLN+AHNN IPYWP   Q P  PH+N  ++P+SD +NP ENL+KFG Q   EE+ Y     N NGYG
Subjt:  GNALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYG

Query:  NFLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF
        +FLPI+  QGQSS+QM + ++ENYN    G++DPRRVLC GLEFL+ D  QI     HGC+MGSL SSSCP+    MLQDL TT ++++A F
Subjt:  NFLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF

A0A6J1HEB2 transcription factor RAX3-like isoform X2

1.2e-85

66.67

Show/hide

Query:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRRG
        G  +  P+K+   RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE    QQATRRG
Subjt:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRRG

Query:  NALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYGN
        NALK  QQMK   E+NN  T +GAENN+ A+FSLN+AHNN IPYWP   Q P  PH+N  ++P+SD +NP ENL+KFG Q   EE+ Y     N NGYG+
Subjt:  NALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYGN

Query:  FLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF
        FLPI+  QGQSS+QM + ++ENYN    G++DPRRVLC GLEFL+ D  QI     HGC+MGSL SSSCP+    MLQDL TT ++++A F
Subjt:  FLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF

A0A6J1K654 transcription factor RAX3-like isoform X2

3.8e-87

67.7

Show/hide

Query:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRRG
        G  +  P+K+   RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE    QQATRRG
Subjt:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRRG

Query:  NALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYGN
        NALK  QQMK  SE+NN  T +GAENN+ A+FSLN+AHNN IPYWP   Q P APH+N  ++P+SD +NP ENL+KFG Q   EE+ Y     N NGYG+
Subjt:  NALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYGN

Query:  FLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF
        FLPI+  QGQSS+QM + ++ENYN    G++DPRRVLC GLEFL+ D  QI     HGCEMGSL SSSCP+    MLQDL TT ++++A F
Subjt:  FLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF

A0A6J1K871 transcription factor RAX3-like isoform X1

4.9e-87

67.47

Show/hide

Query:  GTGLLCPKKL----RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRR
        G  +  P+K+    RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE    QQATRR
Subjt:  GTGLLCPKKL----RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE----QQATRR

Query:  GNALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYG
        GNALK  QQMK  SE+NN  T +GAENN+ A+FSLN+AHNN IPYWP   Q P APH+N  ++P+SD +NP ENL+KFG Q   EE+ Y     N NGYG
Subjt:  GNALK--QQMKIRSESNN--TTHGAENNS-AVFSLNDAHNNIIPYWP---QFPTAPHFN--TIPSSDHMNPNENLTKFGVQ-FTEETLY-----NPNGYG

Query:  NFLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF
        +FLPI+  QGQSS+QM + ++ENYN    G++DPRRVLC GLEFL+ D  QI     HGCEMGSL SSSCP+    MLQDL TT ++++A F
Subjt:  NFLPIIEGQGQSSSQMGD-QLENYNNNNMGFDDPRRVLCSGLEFLYGD--QI-----HGCEMGSLISSSCPSNYEAMLQDLSTT-QEFSANF

SwissProt top hits

e value

%identity

Alignment

F4JSU0 Transcription factor MYB87

5.0e-36

60.32

Show/hide

Query:  MELVGTG---LLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQAT
        +E  GTG   +  P+++   RCGKSCRLRWLNYLRPN+KHGGF++EED IICSLY++IGSRWSIIA+QLPGRTDNDIKNYWNTRLKKKL  KQ       
Subjt:  MELVGTG---LLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQAT

Query:  RRGNALKQQMKIRSESNNTTHGAENN
          G A  QQ+ ++ E   T+  +  N
Subjt:  RRGNALKQQMKIRSESNNTTHGAENN

Q9FG68 Transcription factor RAX1

2.4e-30

68.09

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Query:  RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRG---NALKQQMK
        RCGKSCRLRWLNYLRPNIKHG FSEEEDRII SL+ +IGSRWSIIAA LPGRTDNDIKNYWNT+L+KKL         +       N + Q +K
Subjt:  RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRG---NALKQQMK

Q9FKL2 Transcription factor MYB36

1.1e-35

40.57

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Query:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK
        G  +  P+K+   RCGKSCRLRWLNYLRPNIKHGGFSEEEDRII SLY+SIGSRWSIIAAQLPGRTDNDIKNYWNT+LKKKL G+Q++      R +++ 
Subjt:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK

Query:  QQMKIRSESNNTTHGAEN--NSAVFSL-------------NDAHNNIIPYWPQFPTAPHFNTIPSSDHMNPNENLTKFGVQFTEETLYNPNGYGNFLPII
           +    +NN     +N  NSA+  L             +  +NN I  WP+        T   +  +   E+    GV        N +   N   + 
Subjt:  QQMKIRSESNNTTHGAEN--NSAVFSL-------------NDAHNNIIPYWPQFPTAPHFNTIPSSDHMNPNENLTKFGVQFTEETLYNPNGYGNFLPII

Query:  EGQGQSSSQMGDQLENYNN------NNMGFDDPRRVLCSGLEFL
        +    +SS   + +E   N       N GF    R+    ++F+
Subjt:  EGQGQSSSQMGDQLENYNN------NNMGFDDPRRVLCSGLEFL

Q9M2Y9 Transcription factor RAX3

1.7e-36

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Query:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE-QQATRRGNAL
        G  +  P+K+   RCGKSCRLRWLNYLRPNIKHGGFSEEE+ IICSLY++IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL  KQRKE Q+A      +
Subjt:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE-QQATRRGNAL

Query:  KQQMKIRSESN--NTTHGAENNSAVFSLNDAHNNI
           MK + +     T+     +  +F+    H+N+
Subjt:  KQQMKIRSESN--NTTHGAENNSAVFSLNDAHNNI

Q9SJL7 Transcription factor RAX2

2.9e-28

33.57

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Query:  MELVGTG---LLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQAT
        +E  GTG   +  P K    RCGKSCRLRWLNYLRPNI+HG F+EEED II SL+ SIGSRWS+IAA L GRTDNDIKNYWNT+LKKKL           
Subjt:  MELVGTG---LLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQAT

Query:  RRGNALKQQMKIRSESNNTTHGAENNSAVFSLNDAHNNIIPYWPQFP--TAPHFNTIPS----------SDHM-----NPNENLTKFGVQFTEETLYNPN
                 + I + S++ +  + ++  +       N+++PY P       PH   + +           + M     +PN N      Q   +      
Subjt:  RRGNALKQQMKIRSESNNTTHGAENNSAVFSLNDAHNNIIPYWPQFP--TAPHFNTIPS----------SDHM-----NPNENLTKFGVQFTEETLYNPN

Query:  GYGNFLPIIEGQGQSSSQMGDQLE--NYNNNNMGFDDPRRVLCSGLEFLYGDQIHGCEMGSLISSSCPSNYEAMLQDLSTTQE
        G      +  G   +S+    ++E  ++++++   ++  R + S +   YG +    E+  LISSSC S+  ++  D + T++
Subjt:  GYGNFLPIIEGQGQSSSQMGDQLE--NYNNNNMGFDDPRRVLCSGLEFLYGDQIHGCEMGSLISSSCPSNYEAMLQDLSTTQE

Arabidopsis top hits

e value

%identity

Alignment

AT3G49690.1 myb domain protein 84

1.2e-37

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Query:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE-QQATRRGNAL
        G  +  P+K+   RCGKSCRLRWLNYLRPNIKHGGFSEEE+ IICSLY++IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL  KQRKE Q+A      +
Subjt:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKE-QQATRRGNAL

Query:  KQQMKIRSESN--NTTHGAENNSAVFSLNDAHNNI
           MK + +     T+     +  +F+    H+N+
Subjt:  KQQMKIRSESN--NTTHGAENNSAVFSLNDAHNNI

AT4G37780.1 myb domain protein 87

3.6e-37

60.32

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Query:  MELVGTG---LLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQAT
        +E  GTG   +  P+++   RCGKSCRLRWLNYLRPN+KHGGF++EED IICSLY++IGSRWSIIA+QLPGRTDNDIKNYWNTRLKKKL  KQ       
Subjt:  MELVGTG---LLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQAT

Query:  RRGNALKQQMKIRSESNNTTHGAENN
          G A  QQ+ ++ E   T+  +  N
Subjt:  RRGNALKQQMKIRSESNNTTHGAENN

AT5G23000.1 myb domain protein 37

1.7e-31

68.09

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Query:  RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRG---NALKQQMK
        RCGKSCRLRWLNYLRPNIKHG FSEEEDRII SL+ +IGSRWSIIAA LPGRTDNDIKNYWNT+L+KKL         +       N + Q +K
Subjt:  RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRG---NALKQQMK

AT5G57620.1 myb domain protein 36

7.9e-37

40.57

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Query:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK
        G  +  P+K+   RCGKSCRLRWLNYLRPNIKHGGFSEEEDRII SLY+SIGSRWSIIAAQLPGRTDNDIKNYWNT+LKKKL G+Q++      R +++ 
Subjt:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK

Query:  QQMKIRSESNNTTHGAEN--NSAVFSL-------------NDAHNNIIPYWPQFPTAPHFNTIPSSDHMNPNENLTKFGVQFTEETLYNPNGYGNFLPII
           +    +NN     +N  NSA+  L             +  +NN I  WP+        T   +  +   E+    GV        N +   N   + 
Subjt:  QQMKIRSESNNTTHGAEN--NSAVFSL-------------NDAHNNIIPYWPQFPTAPHFNTIPSSDHMNPNENLTKFGVQFTEETLYNPNGYGNFLPII

Query:  EGQGQSSSQMGDQLENYNN------NNMGFDDPRRVLCSGLEFL
        +    +SS   + +E   N       N GF    R+    ++F+
Subjt:  EGQGQSSSQMGDQLENYNN------NNMGFDDPRRVLCSGLEFL

AT5G65790.1 myb domain protein 68

9.0e-41

61.11

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Query:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK
        G  +  P+K+   RCGKSCRLRWLNYLRPNIKHGGFSEEED IIC+LYV+IGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKL  KQRKE Q  R    +K
Subjt:  GTGLLCPKKL---RCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALK

Query:  QQM-KIRSESNNTTHGAENNSAVFSLNDAHNNIIPYWPQFPTAP
        Q+M  ++ +      G  N S    LN+   +    WP  P  P
Subjt:  QQM-KIRSESNNTTHGAENNSAVFSLNDAHNNIIPYWPQFPTAP

Sequences

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CDS sequence

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ATGGAACTGGTGGGAACTGGATTGCTTTGCCCCAAAAAATTGAGATGTGGGAAAAGCTGCCGCCTGAGATGGCTAAACTATCTGCGTCCTAACATCAAGCATGGAGGTTT
CTCTGAAGAAGAAGATAGAATCATTTGTAGCCTCTACGTTAGTATTGGAAGCAGGTGGTCTATAATTGCAGCACAATTGCCGGGAAGGACAGATAATGACATAAAGAACT
ACTGGAACACGAGGTTGAAGAAGAAGCTATTCGGGAAGCAGCGGAAAGAGCAACAGGCAACTCGAAGGGGAAATGCCCTAAAGCAGCAAATGAAGATCAGATCAGAGAGC
AATAACACAACTCATGGGGCTGAGAATAACAGCGCCGTCTTCTCTCTAAACGACGCCCACAACAACATTATTCCTTATTGGCCTCAATTCCCTACAGCACCACACTTCAA
CACCATTCCCTCTTCTGATCATATGAACCCCAATGAGAATTTAACCAAATTTGGAGTTCAATTTACAGAAGAAACTCTGTATAACCCTAATGGGTATGGTAATTTTTTGC
CAATTATTGAAGGGCAAGGACAAAGCAGCAGCCAAATGGGGGACCAGCTTGAGAATTACAACAACAATAATATGGGGTTCGATGATCCGAGGAGGGTTTTGTGTAGTGGA
CTAGAATTTCTGTATGGGGATCAGATTCATGGCTGCGAAATGGGGTCTCTGATTTCTTCTTCTTGTCCTTCGAACTACGAGGCAATGCTCCAAGATTTGTCCACTACTCA
AGAATTTAGTGCTAATTTT

mRNA sequence

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Protein sequence

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MELVGTGLLCPKKLRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLFGKQRKEQQATRRGNALKQQMKIRSES
NNTTHGAENNSAVFSLNDAHNNIIPYWPQFPTAPHFNTIPSSDHMNPNENLTKFGVQFTEETLYNPNGYGNFLPIIEGQGQSSSQMGDQLENYNNNNMGFDDPRRVLCSG
LEFLYGDQIHGCEMGSLISSSCPSNYEAMLQDLSTTQEFSANF

MS001452 (gene) of Bitter gourd (TR) v1 genome