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MS001466 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001466
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhytosulfokine-beta
Genome locationscaffold36:4417039..4417386
RNA-Seq ExpressionMS001466
SyntenyMS001466
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0008283 - cell population proliferation (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR009438 - Phytosulfokine


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585714.1 Phytosulfokine, partial [Cucurbita argyrosperma subsp. sororia]2.6e-0953.01Show/hide
Query:  MSKQLAALFAIAALLTMSVLLSSQARPITTFSANSVE---IAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETK
        MSK L ALF++ AL+TMS+L SS+ARPI T +A S++   IAH    ++ H+D C E  E ++CL +RT+EAHTDYIY+ +TK
Subjt:  MSKQLAALFAIAALLTMSVLLSSQARPITTFSANSVE---IAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETK
KAG6598323.1 Phytosulfokine, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1062.2Show/hide
Query:  MSKQLAALFAIAALLTMSVLL-SSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
        MSK LAALF IAAL++MS++L SS+ARPITT +A S  IA+P     V E+ C +     DCL RRTLEAHTDYIYSG+TKP
Subjt:  MSKQLAALFAIAALLTMSVLL-SSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
XP_022131649.1 uncharacterized protein LOC111004777 [Momordica charantia]1.4e-34100Show/hide
Query:  MSKQLAALFAIAALLTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
        MSKQLAALFAIAALLTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
Subjt:  MSKQLAALFAIAALLTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
XP_022132249.1 phytosulfokines-like [Momordica charantia]6.9e-1060.76Show/hide
Query:  QLAALFAIAAL-LTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
        +LAALF I AL LTMS+L SS+ARP     A SV+I +P  ++ V+ D CDER  D+DCL RRTL AHTDYIY+ ETKP
Subjt:  QLAALFAIAAL-LTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
XP_023546620.1 phytosulfokines-like [Cucurbita pepo subsp. pepo]1.5e-1264.2Show/hide
Query:  MSKQLAALFAIAALLTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
        MSK LAALF IAALLTM    SS+ARPI T +A S  IA+P   + V +DG  E  E  DCL RRTLEAHTDYIYSG+TKP
Subjt:  MSKQLAALFAIAALLTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
TrEMBL top hitse value%identityAlignment
A0A6J1BQV2 Phytosulfokine-beta6.7e-35100Show/hide
Query:  MSKQLAALFAIAALLTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
        MSKQLAALFAIAALLTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
Subjt:  MSKQLAALFAIAALLTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
A0A6J1BSJ0 Phytosulfokine-beta3.4e-1060.76Show/hide
Query:  QLAALFAIAAL-LTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
        +LAALF I AL LTMS+L SS+ARP     A SV+I +P  ++ V+ D CDER  D+DCL RRTL AHTDYIY+ ETKP
Subjt:  QLAALFAIAAL-LTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
SwissProt top hitse value%identityAlignment
O81003 Phytosulfokines 24.5e-0439.02Show/hide
Query:  IAALLTMSVLLSS----QARPITTFSANSVEIAHPDSKDRVHEDGCDER--------AEDQDCLNRRTLEAHTDYIYSGETK
        ++ALLT+++LL S     ARP    S +    A P + ++  E   D+         A+D+DCL RRTL AHTDYIY+ + K
Subjt:  IAALLTMSVLLSS----QARPITTFSANSVEIAHPDSKDRVHEDGCDER--------AEDQDCLNRRTLEAHTDYIYSGETK
Arabidopsis top hitse value%identityAlignment
AT2G22860.1 phytosulfokine 2 precursor3.2e-0539.02Show/hide
Query:  IAALLTMSVLLSS----QARPITTFSANSVEIAHPDSKDRVHEDGCDER--------AEDQDCLNRRTLEAHTDYIYSGETK
        ++ALLT+++LL S     ARP    S +    A P + ++  E   D+         A+D+DCL RRTL AHTDYIY+ + K
Subjt:  IAALLTMSVLLSS----QARPITTFSANSVEIAHPDSKDRVHEDGCDER--------AEDQDCLNRRTLEAHTDYIYSGETK
AT3G49780.1 phytosulfokine 4 precursor6.1e-0432.05Show/hide
Query:  QLAALFAIAALLTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP
        +   +F +A LL  ++  +++  P TT + +          D+V E+ C+   E ++CL RR+L  HTDYIY+   KP
Subjt:  QLAALFAIAALLTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGCAGCTCGCAGCTCTGTTCGCCATTGCAGCCCTTCTTACAATGTCCGTTCTGTTGTCTTCCCAAGCTCGTCCAATAACCACATTCAGCGCCAATTCTGTCGA
AATCGCGCATCCGGATTCGAAAGATCGGGTTCATGAAGACGGATGCGATGAACGAGCGGAAGATCAGGACTGCCTGAATAGAAGAACATTAGAGGCTCATACCGATTATA
TCTATTCAGGTGAGACCAAGCCA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGCAGCTCGCAGCTCTGTTCGCCATTGCAGCCCTTCTTACAATGTCCGTTCTGTTGTCTTCCCAAGCTCGTCCAATAACCACATTCAGCGCCAATTCTGTCGA
AATCGCGCATCCGGATTCGAAAGATCGGGTTCATGAAGACGGATGCGATGAACGAGCGGAAGATCAGGACTGCCTGAATAGAAGAACATTAGAGGCTCATACCGATTATA
TCTATTCAGGTGAGACCAAGCCA
Protein sequenceShow/hide protein sequence
MSKQLAALFAIAALLTMSVLLSSQARPITTFSANSVEIAHPDSKDRVHEDGCDERAEDQDCLNRRTLEAHTDYIYSGETKP