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MS001467 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001467
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RALF-like 19
Genome locationscaffold36:4419656..4419964
RNA-Seq ExpressionMS001467
SyntenyMS001467
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138431.1 protein RALF-like 19 [Momordica charantia]2.2e-2156.9Show/hide
Query:  MGVKLWLILLLILAVEVAPHSATLNNNAV-------------FSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANP
        MG KL LILLL+ A  V PH A   N+ +             F+  G L GE        R+LL RGK+LSYAALK N IPCG RGMSYYDC KR +ANP
Subjt:  MGVKLWLILLLILAVEVAPHSATLNNNAV-------------FSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANP

Query:  YRRSCLAIHGCARFTD
        YRRSCLAI GCARFTD
Subjt:  YRRSCLAIHGCARFTD

XP_022138616.1 protein RALF-like 19 [Momordica charantia]2.7e-3578.64Show/hide
Query:  MGVKLWLILLLILAVEVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        MGVKL L+LLL LA  V P SA+ +N  VFS  G LFGEL PRNLLGR LL +GKYLSYAALK N IPCG RGMSYYDCTKRKRANPYRRSCLAIHGCAR
Subjt:  MGVKLWLILLLILAVEVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Query:  FTD
        FTD
Subjt:  FTD

XP_022138617.1 protein RALF-like 19 [Momordica charantia]2.0e-3881.55Show/hide
Query:  MGVKLWLILLLILAVEVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        MGVKL LILLLILA  VA HSATL+++AVFS  G LFGE  PRNL+GRS+L +GKYLSYAALK N IPCG RGMSYYDCTKRKRANPYRRSCLAIHGCAR
Subjt:  MGVKLWLILLLILAVEVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Query:  FTD
        FTD
Subjt:  FTD

XP_022138618.1 protein RALF-like 19 [Momordica charantia]5.7e-3370.43Show/hide
Query:  MGVKLWLILLLILAVEVAPHSATL------------NNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPY
        MGVK  LILLL LA  V PHSA              N++AVFS  G LFGE  PRNL+GRS+L +GKYLSYAALK N IPCG RGMSYYDCTKRKRANPY
Subjt:  MGVKLWLILLLILAVEVAPHSATL------------NNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPY

Query:  RRSCLAIHGCARFTD
        RRSCLAIHGCARFTD
Subjt:  RRSCLAIHGCARFTD

XP_042944478.1 protein RALF-like 19 [Carya illinoinensis]1.1e-1750.46Show/hide
Query:  MGVKLWLILLLILAVEVAPHSATLNNNAVFSSRGTLFGELRPRNLL------GRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLA
        M  K WLI LL+    VA  S+T+N     S  G +   +   N +      GR L  R KY+SY ALK NS+PCGRRG SYY+C KRKRANPY+RSC  
Subjt:  MGVKLWLILLLILAVEVAPHSATLNNNAVFSSRGTLFGELRPRNLL------GRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLA

Query:  IHGCARFTD
        I  CAR TD
Subjt:  IHGCARFTD

TrEMBL top hitse value%identityAlignment
A0A2I4H8H5 protein RALF-like 198.9e-1648.72Show/hide
Query:  MGVKLWLILLLILAVEVAPHSAT--------LNNNAVFSSRGTLFGELRPRNLL------GRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRAN
        M  K WLI LL LA+ V   S+T        +N     S  G +   +   N +      GR L  R KY+SY ALK NS+PCGRRG SYY+C KRKRAN
Subjt:  MGVKLWLILLLILAVEVAPHSAT--------LNNNAVFSSRGTLFGELRPRNLL------GRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRAN

Query:  PYRRSCLAIHGCARFTD
        PY+RSC AI  CAR TD
Subjt:  PYRRSCLAIHGCARFTD

A0A6J1C9P3 protein RALF-like 191.1e-2156.9Show/hide
Query:  MGVKLWLILLLILAVEVAPHSATLNNNAV-------------FSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANP
        MG KL LILLL+ A  V PH A   N+ +             F+  G L GE        R+LL RGK+LSYAALK N IPCG RGMSYYDC KR +ANP
Subjt:  MGVKLWLILLLILAVEVAPHSATLNNNAV-------------FSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANP

Query:  YRRSCLAIHGCARFTD
        YRRSCLAI GCARFTD
Subjt:  YRRSCLAIHGCARFTD

A0A6J1CA84 protein RALF-like 191.3e-3578.64Show/hide
Query:  MGVKLWLILLLILAVEVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        MGVKL L+LLL LA  V P SA+ +N  VFS  G LFGEL PRNLLGR LL +GKYLSYAALK N IPCG RGMSYYDCTKRKRANPYRRSCLAIHGCAR
Subjt:  MGVKLWLILLLILAVEVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Query:  FTD
        FTD
Subjt:  FTD

A0A6J1CBM3 protein RALF-like 199.7e-3981.55Show/hide
Query:  MGVKLWLILLLILAVEVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        MGVKL LILLLILA  VA HSATL+++AVFS  G LFGE  PRNL+GRS+L +GKYLSYAALK N IPCG RGMSYYDCTKRKRANPYRRSCLAIHGCAR
Subjt:  MGVKLWLILLLILAVEVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Query:  FTD
        FTD
Subjt:  FTD

A0A6J1CDH9 protein RALF-like 192.7e-3370.43Show/hide
Query:  MGVKLWLILLLILAVEVAPHSATL------------NNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPY
        MGVK  LILLL LA  V PHSA              N++AVFS  G LFGE  PRNL+GRS+L +GKYLSYAALK N IPCG RGMSYYDCTKRKRANPY
Subjt:  MGVKLWLILLLILAVEVAPHSATL------------NNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPY

Query:  RRSCLAIHGCARFTD
        RRSCLAIHGCARFTD
Subjt:  RRSCLAIHGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 191.2e-1446.36Show/hide
Query:  MGVKLWLIL-LLILAVEVAPHSAT-------LNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSC
        MG+K+ LIL LL LAV     +AT       +N        G L   L       R L  R  Y+SY AL+ N++PC RRG SYYDC KRKRANPYRR C
Subjt:  MGVKLWLIL-LLILAVEVAPHSAT-------LNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSC

Query:  LAIHGCARFT
          I  C R T
Subjt:  LAIHGCARFT

Q8L9P8 Protein RALF-like 332.8e-1138.82Show/hide
Query:  EVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        +  P  +  N      S  T   E    + + R +L   KY+SY AL+ N++PC RRG SYY+C +  +ANPY R C AI  C R
Subjt:  EVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Q9FZA0 Protein RALF-like 43.0e-1344.44Show/hide
Query:  MGVKLWLIL-LLILAVEVAPHSATLN-NNAVFSSRGTLFGELRPRNLL----GRSLLPRG-KYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCL
        MGVK+ LI  LLILA+     +AT     +  + +G +  +    +L+     R  L RG +Y+ Y ALK N++PC RRG SYYDC KR+R NPYRR C 
Subjt:  MGVKLWLIL-LLILAVEVAPHSATLN-NNAVFSSRGTLFGELRPRNLL----GRSLLPRG-KYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCL

Query:  AIHGCARF
        AI  C R+
Subjt:  AIHGCARF

Q9LUS7 Rapid alkalinization factor 234.9e-1138.82Show/hide
Query:  EVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        E +  +A  +   +F   G +  E    + + R +L   +Y+SY AL+ N+IPC RRG SYY+C +  +ANPY R C AI  C R
Subjt:  EVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Q9MA62 Protein RALF-like 221.8e-1049.09Show/hide
Query:  LGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        + R +L + KY+SY A++ NS+PC RRG SYY+C +  +ANPY R C  I  C R
Subjt:  LGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 42.2e-1444.44Show/hide
Query:  MGVKLWLIL-LLILAVEVAPHSATLN-NNAVFSSRGTLFGELRPRNLL----GRSLLPRG-KYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCL
        MGVK+ LI  LLILA+     +AT     +  + +G +  +    +L+     R  L RG +Y+ Y ALK N++PC RRG SYYDC KR+R NPYRR C 
Subjt:  MGVKLWLIL-LLILAVEVAPHSATLN-NNAVFSSRGTLFGELRPRNLL----GRSLLPRG-KYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCL

Query:  AIHGCARF
        AI  C R+
Subjt:  AIHGCARF

AT2G33775.1 ralf-like 198.8e-1646.36Show/hide
Query:  MGVKLWLIL-LLILAVEVAPHSAT-------LNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSC
        MG+K+ LIL LL LAV     +AT       +N        G L   L       R L  R  Y+SY AL+ N++PC RRG SYYDC KRKRANPYRR C
Subjt:  MGVKLWLIL-LLILAVEVAPHSAT-------LNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSC

Query:  LAIHGCARFT
          I  C R T
Subjt:  LAIHGCARFT

AT3G05490.1 ralf-like 221.3e-1149.09Show/hide
Query:  LGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        + R +L + KY+SY A++ NS+PC RRG SYY+C +  +ANPY R C  I  C R
Subjt:  LGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR

AT3G16570.1 rapid alkalinization factor 233.4e-1238.82Show/hide
Query:  EVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        E +  +A  +   +F   G +  E    + + R +L   +Y+SY AL+ N+IPC RRG SYY+C +  +ANPY R C AI  C R
Subjt:  EVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR

AT4G15800.1 ralf-like 332.0e-1238.82Show/hide
Query:  EVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        +  P  +  N      S  T   E    + + R +L   KY+SY AL+ N++PC RRG SYY+C +  +ANPY R C AI  C R
Subjt:  EVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGTGAAGCTCTGGCTGATTCTCCTCCTCATCCTCGCCGTAGAGGTGGCGCCTCACTCCGCAACCCTCAACAACAACGCCGTTTTCTCCTCCCGCGGCACCTTGTT
CGGAGAATTGAGACCACGGAACCTGCTGGGCCGTAGTCTACTTCCAAGGGGGAAATATCTGAGCTACGCGGCGCTGAAGCATAACAGCATCCCCTGCGGCCGCAGGGGCA
TGTCTTACTATGACTGCACCAAGCGCAAGAGAGCCAATCCTTATAGACGCTCCTGCCTCGCCATCCATGGCTGCGCTAGATTCACTGAT
mRNA sequenceShow/hide mRNA sequence
ATGGGGGTGAAGCTCTGGCTGATTCTCCTCCTCATCCTCGCCGTAGAGGTGGCGCCTCACTCCGCAACCCTCAACAACAACGCCGTTTTCTCCTCCCGCGGCACCTTGTT
CGGAGAATTGAGACCACGGAACCTGCTGGGCCGTAGTCTACTTCCAAGGGGGAAATATCTGAGCTACGCGGCGCTGAAGCATAACAGCATCCCCTGCGGCCGCAGGGGCA
TGTCTTACTATGACTGCACCAAGCGCAAGAGAGCCAATCCTTATAGACGCTCCTGCCTCGCCATCCATGGCTGCGCTAGATTCACTGAT
Protein sequenceShow/hide protein sequence
MGVKLWLILLLILAVEVAPHSATLNNNAVFSSRGTLFGELRPRNLLGRSLLPRGKYLSYAALKHNSIPCGRRGMSYYDCTKRKRANPYRRSCLAIHGCARFTD