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MS001469 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001469
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhytosulfokine-beta
Genome locationscaffold36:4426376..4426486
RNA-Seq ExpressionMS001469
SyntenyMS001469
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0008283 - cell population proliferation (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR009438 - Phytosulfokine


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131649.1 uncharacterized protein LOC111004777 [Momordica charantia]6.8e-1397.3Show/hide
Query:  TVNGDICDERNPDEDCLFRRTLTAHTDYIYTETKPKR
        TVNGDICDE+NPDEDCLFRRTLTAHTDYIYTETKPKR
Subjt:  TVNGDICDERNPDEDCLFRRTLTAHTDYIYTETKPKR
XP_022132249.1 phytosulfokines-like [Momordica charantia]2.3e-13100Show/hide
Query:  TVNGDICDERNPDEDCLFRRTLTAHTDYIYTETKPKR
        TVNGDICDERNPDEDCLFRRTLTAHTDYIYTETKPKR
Subjt:  TVNGDICDERNPDEDCLFRRTLTAHTDYIYTETKPKR
TrEMBL top hitse value%identityAlignment
A0A6J1BQV2 Phytosulfokine-beta3.3e-1397.3Show/hide
Query:  TVNGDICDERNPDEDCLFRRTLTAHTDYIYTETKPKR
        TVNGDICDE+NPDEDCLFRRTLTAHTDYIYTETKPKR
Subjt:  TVNGDICDERNPDEDCLFRRTLTAHTDYIYTETKPKR
A0A6J1BSJ0 Phytosulfokine-beta1.1e-13100Show/hide
Query:  TVNGDICDERNPDEDCLFRRTLTAHTDYIYTETKPKR
        TVNGDICDERNPDEDCLFRRTLTAHTDYIYTETKPKR
Subjt:  TVNGDICDERNPDEDCLFRRTLTAHTDYIYTETKPKR
SwissProt top hitse value%identityAlignment
O81003 Phytosulfokines 26.0e-0481.82Show/hide
Query:  DEDCLFRRTLTAHTDYIYTETK
        DEDCL RRTL AHTDYIYT+ K
Subjt:  DEDCLFRRTLTAHTDYIYTETK
Q9AR88 Phytosulfokines 44.6e-0465.52Show/hide
Query:  GDICDERNPDEDCLFRRTLTAHTDYIYTE
        G  C E   +E+CL RRTLTAHTDYIYT+
Subjt:  GDICDERNPDEDCLFRRTLTAHTDYIYTE
Q9SZG4 Putative phytosulfokines 41.6e-0470Show/hide
Query:  VNGDICDERNPDEDCLFRRTLTAHTDYIYT
        V G+ CD+ + DEDCL RRTLTAH DYIYT
Subjt:  VNGDICDERNPDEDCLFRRTLTAHTDYIYT
Arabidopsis top hitse value%identityAlignment
AT2G22860.1 phytosulfokine 2 precursor4.3e-0581.82Show/hide
Query:  DEDCLFRRTLTAHTDYIYTETK
        DEDCL RRTL AHTDYIYT+ K
Subjt:  DEDCLFRRTLTAHTDYIYTETK
AT4G37720.1 phytosulfokine 6 precursor1.1e-0570Show/hide
Query:  VNGDICDERNPDEDCLFRRTLTAHTDYIYT
        V G+ CD+ + DEDCL RRTLTAH DYIYT
Subjt:  VNGDICDERNPDEDCLFRRTLTAHTDYIYT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGGTTAATGGAGACATATGCGATGAACGAAACCCGGATGAAGATTGCCTCTTCCGAAGAACACTAACGGCTCATACTGATTATATCTATACGGAAACCAAGCCGAAGCG
G
mRNA sequenceShow/hide mRNA sequence
ACGGTTAATGGAGACATATGCGATGAACGAAACCCGGATGAAGATTGCCTCTTCCGAAGAACACTAACGGCTCATACTGATTATATCTATACGGAAACCAAGCCGAAGCG
G
Protein sequenceShow/hide protein sequence
TVNGDICDERNPDEDCLFRRTLTAHTDYIYTETKPKR