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MS001484 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001484
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold36:4514946..4515297
RNA-Seq ExpressionMS001484
SyntenyMS001484
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN62446.1 hypothetical protein Csa_018581 [Cucumis sativus]1.3e-2565.81Show/hide
Query:  NSESRRDFEMETHHRENFH-FPSLLFWILSLKQLILLRSSSSSAKHVMVFESL-NHLLLTLTWAFPILLSFFVYDDIISAERSFVYVGMGLVSVGAQVPG
        NS S+RDFEM+TH  EN H +PSLL  I SLK+LILL SS SSAKH+ +F SL +    TLTWAFP+L SFFVYDDIISAERSFVYVGM  V +   V  
Subjt:  NSESRRDFEMETHHRENFH-FPSLLFWILSLKQLILLRSSSSSAKHVMVFESL-NHLLLTLTWAFPILLSFFVYDDIISAERSFVYVGMGLVSVGAQVPG

Query:  SVADAYGFSQSTLSPLV
          ADAYGF Q TLSP V
Subjt:  SVADAYGFSQSTLSPLV
TrEMBL top hitse value%identityAlignment
A0A0A0LR42 Uncharacterized protein6.2e-2665.81Show/hide
Query:  NSESRRDFEMETHHRENFH-FPSLLFWILSLKQLILLRSSSSSAKHVMVFESL-NHLLLTLTWAFPILLSFFVYDDIISAERSFVYVGMGLVSVGAQVPG
        NS S+RDFEM+TH  EN H +PSLL  I SLK+LILL SS SSAKH+ +F SL +    TLTWAFP+L SFFVYDDIISAERSFVYVGM  V +   V  
Subjt:  NSESRRDFEMETHHRENFH-FPSLLFWILSLKQLILLRSSSSSAKHVMVFESL-NHLLLTLTWAFPILLSFFVYDDIISAERSFVYVGMGLVSVGAQVPG

Query:  SVADAYGFSQSTLSPLV
          ADAYGF Q TLSP V
Subjt:  SVADAYGFSQSTLSPLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACTCAGAATCTAGACGAGATTTTGAAATGGAAACCCACCACCGGGAGAACTTCCACTTCCCCAGTCTCCTTTTTTGGATTCTTAGCCTAAAGCAATTGATCCTTCTTCG
TTCGAGCTCATCCAGTGCAAAGCATGTGATGGTTTTCGAGTCTCTGAATCATCTGCTGCTTACATTGACATGGGCTTTTCCTATTCTTCTCTCTTTTTTTGTGTATGATG
ACATTATTAGTGCAGAAAGGTCCTTTGTCTATGTTGGAATGGGCCTTGTATCTGTAGGGGCACAGGTGCCTGGCAGTGTCGCAGATGCCTATGGATTCTCTCAGTCTACT
CTCTCTCCACTGGTT
mRNA sequenceShow/hide mRNA sequence
AACTCAGAATCTAGACGAGATTTTGAAATGGAAACCCACCACCGGGAGAACTTCCACTTCCCCAGTCTCCTTTTTTGGATTCTTAGCCTAAAGCAATTGATCCTTCTTCG
TTCGAGCTCATCCAGTGCAAAGCATGTGATGGTTTTCGAGTCTCTGAATCATCTGCTGCTTACATTGACATGGGCTTTTCCTATTCTTCTCTCTTTTTTTGTGTATGATG
ACATTATTAGTGCAGAAAGGTCCTTTGTCTATGTTGGAATGGGCCTTGTATCTGTAGGGGCACAGGTGCCTGGCAGTGTCGCAGATGCCTATGGATTCTCTCAGTCTACT
CTCTCTCCACTGGTT
Protein sequenceShow/hide protein sequence
NSESRRDFEMETHHRENFHFPSLLFWILSLKQLILLRSSSSSAKHVMVFESLNHLLLTLTWAFPILLSFFVYDDIISAERSFVYVGMGLVSVGAQVPGSVADAYGFSQST
LSPLV