; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001565 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001565
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
Genome locationscaffold119:417004..417155
RNA-Seq ExpressionMS001565
SyntenyMS001565
Gene Ontology termsGO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001516 - NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALO21756.1 NdhF [Cucurbita argyrosperma]3.3e-1086.27Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L CIMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
ALO22793.1 NdhF [Cucurbita pepo subsp. pepo]3.3e-1086.27Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L CIMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
QWV60888.1 NADH-plastoquinone oxidoreductase subunit 5 [Cucurbita ficifolia]3.3e-1086.27Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L CIMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
QZL38642.1 NADH dehydrogenase subunit F [Citrullus naudinianus]3.3e-1086.27Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L CIMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
YP_009447583.1 NADH dehydrogenase subunit 5 [Cucurbita moschata]3.3e-1086.27Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L CIMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
TrEMBL top hitse value%identityAlignment
A0A0S2IE76 NAD(P)H dehydrogenase subunit 51.6e-1086.27Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L CIMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
A0A1P8LEA9 NAD(P)H dehydrogenase subunit 51.6e-1086.27Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L CIMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
A0A1P8LET2 NAD(P)H dehydrogenase subunit 51.6e-1086.27Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L CIMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
A0A515BLN2 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.6e-1086.27Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L CIMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
A0A7T3USK6 NADH-plastoquinone oxidoreductase subunit 51.6e-1086.27Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L CIMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
SwissProt top hitse value%identityAlignment
A1XG02 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.8e-1182.35Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L  IMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMS FNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
Q0ZIX1 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic6.9e-1180.39Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L  IMSILIT V IMVLIYSDNYMSHDQ YLRFFAYMS FN S+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
Q2QD43 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic2.8e-1282.35Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        Y I+ L CIM+ILIT V IMVLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
Q9BBP6 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic6.9e-1178.43Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        YLI+ L  IMSILIT V I+VLIYSDNYMSHDQ YLRFFAY+S FNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
Q9MVL6 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (Fragment)5.2e-1180.39Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        Y I+ L  IMSILIT V I VLIYSDNYMSHDQ YLRFFAYMSLFNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
Arabidopsis top hitse value%identityAlignment
ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein2.4e-1176.47Show/hide
Query:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG
        Y I+ L  IMSILIT V I+VLIYSDNYMSHDQ YLRFFAYM  FNTS+LG
Subjt:  YLINLLICIMSILITMVRIMVLIYSDNYMSHDQ-YLRFFAYMSLFNTSLLG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACTTGATCAATCTACTTATTTGTATTATGTCAATATTAATCACGATGGTTAGAATTATGGTTCTTATTTATAGTGACAATTATATGTCTCATGATCAATATTTGAGATT
TTTTGCTTATATGAGTTTATTCAATACATCATTGTTGGGG
mRNA sequenceShow/hide mRNA sequence
TACTTGATCAATCTACTTATTTGTATTATGTCAATATTAATCACGATGGTTAGAATTATGGTTCTTATTTATAGTGACAATTATATGTCTCATGATCAATATTTGAGATT
TTTTGCTTATATGAGTTTATTCAATACATCATTGTTGGGG
Protein sequenceShow/hide protein sequence
YLINLLICIMSILITMVRIMVLIYSDNYMSHDQYLRFFAYMSLFNTSLLG