; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001578 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001578
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHeterogeneous nuclear ribonucleoprotein 1
Genome locationscaffold879:73959..76751
RNA-Seq ExpressionMS001578
SyntenyMS001578
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0048576 - positive regulation of short-day photoperiodism, flowering (biological process)
GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003730 - mRNA 3'-UTR binding (molecular function)
GO:0097157 - pre-mRNA intronic binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057248.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa]7.3e-18791.01Show/hide
Query:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        SMDSKPND +TNG+H D KP+ HKDDG     PPHGDGASAGKIFVGGLPRETTSAQFVKHFG+YG ITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVI
Subjt:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS
        E+TH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFF QYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL+MAGS
Subjt:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS

Query:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
        QVEIKKAEPKKANPPPAPSKRYH+SRPSYSG++GGDAY EFGGGGYGG+FRAGGPYGAR  GYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYGA 
Subjt:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG

Query:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-GGGGYDGAGSAPSGRYHPYGR
        FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA SYDMG+GTGY +GGRGSFYGSR GGGGYDGAGSAPSGRYHPYGR
Subjt:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-GGGGYDGAGSAPSGRYHPYGR

KAG6581052.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]4.4e-18489.15Show/hide
Query:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        SMDSK NDA+TNG+H+D KP+ HKDDG     P HGDGASAGKIFVGGLPRETTSAQFVKHFG+YG ITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVI
Subjt:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS
        E+TH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE DEFRDFF QYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL++AGS
Subjt:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS

Query:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
        QVEIKKAEPKKANPPP PSKRYHDSRPSYSG++ GDAY EFGGGGYGG FRAGGPYGAR  GYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
Subjt:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG

Query:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR----------GGGGYDGAGSAPSGRYHPYGR
        FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMGIGTGYPSGGRGSFYGSR          GGGGYDGAGSAPSGRYHPYGR
Subjt:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR----------GGGGYDGAGSAPSGRYHPYGR

XP_016903287.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo]5.2e-18590.74Show/hide
Query:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        SMDSKPND +TNG+H D KP+ HKDDG     PPHGDGASAGKIFVGGLPRETTSAQFVKHFG+YG ITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVI
Subjt:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS
        E+TH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE DEFRDFF QYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL+MAGS
Subjt:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS

Query:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
        QVEIKKAEPKKANPPPAPSKRYH+SRPSYSG++GGDAY EFGGGGYGG+FRAGGPYGAR  GYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYGA 
Subjt:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG

Query:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-GGGGYDGAGSAPSGRYHPYGR
        FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA SYDMG+GTGY +GGRGSFYGSR GGGGYDGAGSAPSGRYHPYGR
Subjt:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-GGGGYDGAGSAPSGRYHPYGR

XP_022934343.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata]5.7e-18488.92Show/hide
Query:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        SMDSK NDA+TNG+H+D KP+ HKDDG     P HGDGASAGKIFVGGLPRETTSAQFVKHFG+YG ITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVI
Subjt:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS
        E+TH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE DEFRDFF QYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL++AGS
Subjt:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS

Query:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
        QVEIKKAEPKKANPPP PSKRYHDSRPSYSG++ GDAY EFGGGGYGG FRAGGPYGAR  GYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
Subjt:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG

Query:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-----------GGGGYDGAGSAPSGRYHPYGR
        FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMGIGTGYPSGGRGSFYGSR           GGGGYDGAGSAPSGRYHPYGR
Subjt:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-----------GGGGYDGAGSAPSGRYHPYGR

XP_023528997.1 LOW QUALITY PROTEIN: nuclear pore complex protein GP210 [Cucurbita pepo subsp. pepo]3.4e-18489.38Show/hide
Query:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        SMDSK NDA+TNG+H+D KP+ HKDDG     P HGDGASAGKIFVGGLPRETTSAQFVKHFG+YG ITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVI
Subjt:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS
        E+TH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE DEFRDFF QYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL++AGS
Subjt:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS

Query:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
        QVEIKKAEPKKANPPP PSKRYHDSRPSYSG++ GDAY EFGGGGYGG FRAGGPYGAR  GYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
Subjt:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG

Query:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR---------GGGGYDGAGSAPSGRYHPYGR
        FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMGIGTGYPSGGRGSFYGSR         GGGGYDGAGSAPSGRYHPYGR
Subjt:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR---------GGGGYDGAGSAPSGRYHPYGR

TrEMBL top hitse value%identityAlignment
A0A1S4E4Y8 heterogeneous nuclear ribonucleoprotein 12.5e-18590.74Show/hide
Query:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        SMDSKPND +TNG+H D KP+ HKDDG     PPHGDGASAGKIFVGGLPRETTSAQFVKHFG+YG ITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVI
Subjt:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS
        E+TH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE DEFRDFF QYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL+MAGS
Subjt:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS

Query:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
        QVEIKKAEPKKANPPPAPSKRYH+SRPSYSG++GGDAY EFGGGGYGG+FRAGGPYGAR  GYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYGA 
Subjt:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG

Query:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-GGGGYDGAGSAPSGRYHPYGR
        FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA SYDMG+GTGY +GGRGSFYGSR GGGGYDGAGSAPSGRYHPYGR
Subjt:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-GGGGYDGAGSAPSGRYHPYGR

A0A5A7UQ58 Heterogeneous nuclear ribonucleoprotein 13.5e-18791.01Show/hide
Query:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        SMDSKPND +TNG+H D KP+ HKDDG     PPHGDGASAGKIFVGGLPRETTSAQFVKHFG+YG ITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVI
Subjt:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS
        E+TH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFF QYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL+MAGS
Subjt:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS

Query:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
        QVEIKKAEPKKANPPPAPSKRYH+SRPSYSG++GGDAY EFGGGGYGG+FRAGGPYGAR  GYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYGA 
Subjt:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG

Query:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-GGGGYDGAGSAPSGRYHPYGR
        FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA SYDMG+GTGY +GGRGSFYGSR GGGGYDGAGSAPSGRYHPYGR
Subjt:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-GGGGYDGAGSAPSGRYHPYGR

A0A5D3D587 Heterogeneous nuclear ribonucleoprotein 12.5e-18590.74Show/hide
Query:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        SMDSKPND +TNG+H D KP+ HKDDG     PPHGDGASAGKIFVGGLPRETTSAQFVKHFG+YG ITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVI
Subjt:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS
        E+TH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE DEFRDFF QYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL+MAGS
Subjt:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS

Query:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
        QVEIKKAEPKKANPPPAPSKRYH+SRPSYSG++GGDAY EFGGGGYGG+FRAGGPYGAR  GYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYGA 
Subjt:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG

Query:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-GGGGYDGAGSAPSGRYHPYGR
        FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA SYDMG+GTGY +GGRGSFYGSR GGGGYDGAGSAPSGRYHPYGR
Subjt:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-GGGGYDGAGSAPSGRYHPYGR

A0A6J1F7E2 heterogeneous nuclear ribonucleoprotein 12.8e-18488.92Show/hide
Query:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        SMDSK NDA+TNG+H+D KP+ HKDDG     P HGDGASAGKIFVGGLPRETTSAQFVKHFG+YG ITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVI
Subjt:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS
        E+TH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE DEFRDFF QYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL++AGS
Subjt:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS

Query:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
        QVEIKKAEPKKANPPP PSKRYHDSRPSYSG++ GDAY EFGGGGYGG FRAGGPYGAR  GYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
Subjt:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG

Query:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-----------GGGGYDGAGSAPSGRYHPYGR
        FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMGIGTGYPSGGRGSFYGSR           GGGGYDGAGSAPSGRYHPYGR
Subjt:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR-----------GGGGYDGAGSAPSGRYHPYGR

A0A6J1J2Y6 heterogeneous nuclear ribonucleoprotein 13.6e-18489.12Show/hide
Query:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        SMDSK NDA+TNG+H+D KP+ HKDDG     P HGDGASAGKIFVGGLPRETTSAQFVKHFG+YG ITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVI
Subjt:  SMDSKPNDASTNGDHQDPKPITHKDDG-----PPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS
        E+TH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE DEFRDFF QYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRL++AGS
Subjt:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS

Query:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
        QVEIKKAEPKK+NPPP PSKRYHDSRPSYSG++ GDAY EFGGGGYGG FRAGGPYGAR  GYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG
Subjt:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGAR-AGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAG

Query:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR---------GGGGYDGAGSAPSGRYHPYGR
        FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMGIGTGYPSGGRGSFYGSR         GGGGYDGAGSAPSGRYHPYGR
Subjt:  FSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSR---------GGGGYDGAGSAPSGRYHPYGR

SwissProt top hitse value%identityAlignment
P09651 Heterogeneous nuclear ribonucleoprotein A11.9e-3338.19Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIE-ETHVINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT
        K+F+GGL  ETT      HF ++G +TD V+M+D  T   RGFGFVTYA    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIE-ETHVINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT

Query:  SVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYA
          +E    RD+F QYG+++  +IM D  + + RGF F+TF+   +VD ++       + G   E++KA  K+     + S+R      S SG+FGG    
Subjt:  SVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYA

Query:  EFGGG---GYGGAFRAGGPYGARAGYGGYGG-----NDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDFRG-GYGGPDESYGAYNSGGAPNTGG
         FGG    G GG F   G +G   G GGYGG     N F   G YG GG G        G S  YG+G  +GY  +G GYGG   SY +YN+GG    GG
Subjt:  EFGGG---GYGGAFRAGGPYGARAGYGGYGG-----NDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDFRG-GYGGPDESYGAYNSGGAPNTGG

Query:  YAGSYDMGIGTGYPSGG----RGSFYGSRGGGGYDGAGSAPSG
         +GS + G G  Y   G    + S +G   GG + G  S P G
Subjt:  YAGSYDMGIGTGYPSGG----RGSFYGSRGGGGYDGAGSAPSG

P51991 Heterogeneous nuclear ribonucleoprotein A34.8e-3238.46Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EETHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT
        K+F+GGL  ETT     +HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EETHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT

Query:  SVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYA
          +E +  RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R   SG+F G    
Subjt:  SVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYA

Query:  EFGGGGYGGAFRAGGPYGARAGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGI
         FGGG  GG F  GG +G R GYGG GG     YG    GG G Y  +   G    YG G   GY  RGGYGG    YG  N GG    G   G YD   
Subjt:  EFGGGGYGGAFRAGGPYGARAGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGI

Query:  GTGYPSGGR--GSFYGSRGGGGYDGAGSAPSGRYHPYG
          GY  GG   G  YG  GGG Y+  G+    +   YG
Subjt:  GTGYPSGGR--GSFYGSRGGGGYDGAGSAPSGRYHPYG

Q6URK4 Heterogeneous nuclear ribonucleoprotein A31.4e-3137.32Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EETHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT
        K+F+GGL  ETT     +HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EETHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT

Query:  SVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYA
          +E +  RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R   SG+F G    
Subjt:  SVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYA

Query:  EFGGGGYGGAFRAGGPYGARAGYGGYGGNDFSGYGMYGTGGIGAYRED-----PSMGYSAR--YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA
         FGGG  GG F  GG +G R GYGG GG     YG  G GG   +  D        GYS+R  YG G     +  GGYGG    Y  YN GG    G Y 
Subjt:  EFGGGGYGGAFRAGGPYGARAGYGGYGGNDFSGYGMYGTGGIGAYRED-----PSMGYSAR--YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA

Query:  GSYDMGIGTGYPSGGRGSFYGSRGGGGYDGAGSAPSGRYHPYG
        G  +      Y SG + S YG   GG + G  S       PYG
Subjt:  GSYDMGIGTGYPSGGRGSFYGSRGGGGYDGAGSAPSGRYHPYG

Q8BG05 Heterogeneous nuclear ribonucleoprotein A31.4e-3137.32Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EETHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT
        K+F+GGL  ETT     +HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EETHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT

Query:  SVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYA
          +E +  RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R   SG+F G    
Subjt:  SVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYA

Query:  EFGGGGYGGAFRAGGPYGARAGYGGYGGNDFSGYGMYGTGGIGAYRED-----PSMGYSAR--YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA
         FGGG  GG F  GG +G R GYGG GG     YG  G GG   +  D        GYS+R  YG G     +  GGYGG    Y  YN GG    G Y 
Subjt:  EFGGGGYGGAFRAGGPYGARAGYGGYGGNDFSGYGMYGTGGIGAYRED-----PSMGYSAR--YGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA

Query:  GSYDMGIGTGYPSGGRGSFYGSRGGGGYDGAGSAPSGRYHPYG
        G  +      Y SG + S YG   GG + G  S       PYG
Subjt:  GSYDMGIGTGYPSGGRGSFYGSRGGGGYDGAGSAPSGRYHPYG

Q8W034 Heterogeneous nuclear ribonucleoprotein 14.5e-3836.5Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEETHVINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF  YG ++ +++M+D+ TG PRGFGFV ++D SV+D+V++E H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEETHVINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANP----------P
          KTKKIFVGG+P ++ + +EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    D++G QVE+K+A PK ANP           
Subjt:  --KTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANP----------P

Query:  PAPSKRYHDSRPSYSGSFG----------GDAYAEFGGGGYGGAFRAGGPYGARAGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYD
            + Y  +  SY G             G+    +G  GYG  +  G        YGGY G+   GYG   T G GA    P  GY +  G      +D
Subjt:  PAPSKRYHDSRPSYSGSFG----------GDAYAEFGGGGYGGAFRAGGPYGARAGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYD

Query:  --FRGGYGGPDESYGAYNS-----GGAPNT-------------GGYAGSYDMGIGT--------GYPSGGRGSFYGSRG--GGGYDGAGSAPSGRYHPYG
             GYG P    GA +S     G AP T             GGY+GS D G G         G PSGG  +  GS G  GGGY G GS  S     YG
Subjt:  --FRGGYGGPDESYGAYNS-----GGAPNT-------------GGYAGSYDMGIGT--------GYPSGGRGSFYGSRG--GGGYDGAGSAPSGRYHPYG

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-5141.79Show/hide
Query:  ASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEETHVINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG
        +S GK+FVGG+  ETT+  F  +FG++G + DSVIM DR TG+PRGFGFVT+AD +V +KV+EE HVI+ ++V++KRT+P+G   +      KT+KIFVG
Subjt:  ASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEETHVINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG

Query:  GIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPA----PSKRYHDSRPSYSG
        G+P  ++E DE +++F  YG++ EHQIM DH T RSRGFGF+TF+TE +VD L ++G   ++   QVEIK+AEPK+     +     +   +D   SYSG
Subjt:  GIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPA----PSKRYHDSRPSYSG

Query:  SFGGDAYAEFGGGGYGGAFRAGGPYGARAGYGGYGGNDF-SGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNTG-
            D     G GGYG             GYG Y GN   +  G YG                  YG G+  GY    GYGG   + G Y +GG  + G 
Subjt:  SFGGDAYAEFGGGGYGGAFRAGGPYGARAGYGGYGGNDF-SGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNTG-

Query:  --GYAGSYDMGIGTGYPSGGRGSFYGSRGGGGYDGAGSAPSGRYHPY
          G A +   G G  + +G  GS  G   G G +G+G     RYHPY
Subjt:  --GYAGSYDMGIGTGYPSGGRGSFYGSRGGGGYDGAGSAPSGRYHPY

AT3G13224.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-6566.11Show/hide
Query:  KDDGPPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEETHVINGKQVEIKRTIPKGS--SSSRD
        ++D    GDGAS GKIF+GGL ++TT+  F KHFG+YG ITDSVIM+DR TG PRGFGF+T+AD SVVDKVIE+THVINGKQVEIKRTIPKG+  + S+D
Subjt:  KDDGPPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEETHVINGKQVEIKRTIPKGS--SSSRD

Query:  FKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKK
         KTKKIFVGGIP++V E DE +DFF++YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN +DMA +QV + K
Subjt:  FKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKK

AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-8355.28Show/hide
Query:  KDDGPPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEETHVINGKQVEIKRTIPKGS--SSSRD
        ++D    GDGAS GKIF+GGL ++TT+  F KHFG+YG ITDSVIM+DR TG PRGFGF+T+AD SVVDKVIE+THVINGKQVEIKRTIPKG+  + S+D
Subjt:  KDDGPPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEETHVINGKQVEIKRTIPKGS--SSSRD

Query:  FKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPAPSKRYHDSR
         KTKKIFVGGIP++V E DE +DFF++YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN +DMA +QVEIKKAEPKK+     PS   + S 
Subjt:  FKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPAPSKRYHDSR

Query:  PSYSGSFGGDAYAEFGG------GGYG---GAFRA-GGPYGARAGYGGYG----GNDF-SGYGMYGTGGIGAYREDPSMGYSAR---YGAGF-SRGYDFR
        P   G    D+YA +GG      GGYG   G  R+ GGP    AG  GYG    G +F  GY  YG G +G YR +P +GYS+R   YG+GF   GY  R
Subjt:  PSYSGSFGGDAYAEFGG------GGYG---GAFRA-GGPYGARAGYGGYG----GNDF-SGYGMYGTGGIGAYREDPSMGYSAR---YGAGF-SRGYDFR

Query:  GGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSRGGGGYDGAGSAPSGRYHPYGR
        GG G    +Y  Y  GG    GGY G    G G  Y SGG G  Y   G GG  G G + S RYHPY R
Subjt:  GGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSRGGGGYDGAGSAPSGRYHPYGR

AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.2e-3936.5Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEETHVINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF  YG ++ +++M+D+ TG PRGFGFV ++D SV+D+V++E H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEETHVINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANP----------P
          KTKKIFVGG+P ++ + +EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    D++G QVE+K+A PK ANP           
Subjt:  --KTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANP----------P

Query:  PAPSKRYHDSRPSYSGSFG----------GDAYAEFGGGGYGGAFRAGGPYGARAGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYD
            + Y  +  SY G             G+    +G  GYG  +  G        YGGY G+   GYG   T G GA    P  GY +  G      +D
Subjt:  PAPSKRYHDSRPSYSGSFG----------GDAYAEFGGGGYGGAFRAGGPYGARAGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYD

Query:  --FRGGYGGPDESYGAYNS-----GGAPNT-------------GGYAGSYDMGIGT--------GYPSGGRGSFYGSRG--GGGYDGAGSAPSGRYHPYG
             GYG P    GA +S     G AP T             GGY+GS D G G         G PSGG  +  GS G  GGGY G GS  S     YG
Subjt:  --FRGGYGGPDESYGAYNS-----GGAPNT-------------GGYAGSYDMGIGT--------GYPSGGRGSFYGSRG--GGGYDGAGSAPSGRYHPYG

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.7e-10256.31Show/hide
Query:  MDSKPNDASTNGDHQDPKP---ITHKDD-GPPHGDGA--SAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        MD    +     +  DPKP   I   DD   PH  G   SAGKIFVGGL RETTSA+F+KHFG+YG ITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI
Subjt:  MDSKPNDASTNGDHQDPKP---ITHKDD-GPPHGDGA--SAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS
        ++ H+I GKQVEIKRTIP+GS SS DFKTKKIFVGGIP+SVD+ DEF++FF Q+GE+KEHQIMRDHST RSRGFGF+T+E+E  VD LLA GNR++++G+
Subjt:  EETHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGS

Query:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGY---GGAFRAGGPYGA--RAGYGGYGGNDFSGYGMYG-TGGIGAYREDPSMGYSA
        QVEIKKAEPKK N    PSKR+ DSR ++ G + GD Y    GGGY   GG +++GG YG     GYGGYGG +F GYG  G  GG+G YR +P++GYS 
Subjt:  QVEIKKAEPKKANPPPAPSKRYHDSRPSYSGSFGGDAYAEFGGGGY---GGAFRAGGPYGA--RAGYGGYGGNDFSGYGMYG-TGGIGAYREDPSMGYSA

Query:  RY---GAGFSR-GYDF---------------------RGGYGGPDESY---------GAYNSG-GAPNTGGY--AGSYDM---------GIGTGYPSGGR
        RY   G G++R GY                        GGYGGP  SY         G Y  G G    GGY   G YDM         G G G    G 
Subjt:  RY---GAGFSR-GYDF---------------------RGGYGGPDESY---------GAYNSG-GAPNTGGY--AGSYDM---------GIGTGYPSGGR

Query:  GSFYGSRGGGGYDGAGSAPSGRYHPYGR
        GSFYG  GGGG  G G   SGRYHPYGR
Subjt:  GSFYGSRGGGGYDGAGSAPSGRYHPYGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCGCTCCACTGTCCATGGATTCCAAACCAAACGACGCTTCCACTAATGGGGATCATCAGGACCCCAAACCCATCACCCATAAAGATGACGGACCCCCTCATGGCGACGG
AGCGAGTGCTGGGAAAATATTTGTTGGAGGGTTACCGCGGGAGACTACTTCTGCGCAATTTGTTAAACATTTTGGTGAATATGGAGCAATTACGGACTCTGTTATAATGA
AGGACCGGAAGACTGGACATCCCCGCGGTTTCGGGTTTGTGACTTATGCTGATCACTCTGTGGTAGATAAAGTCATTGAGGAGACACATGTTATTAATGGGAAACAAGTG
GAAATCAAACGAACAATACCCAAAGGGTCTTCCAGCTCTAGAGACTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTAGATGAGGCAGATGAGTTCAG
GGATTTCTTTTCGCAATATGGTGAGGTTAAGGAACACCAGATTATGCGCGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGACAGAGCAAGCAG
TTGACGATCTCTTGGCAAATGGTAACAGACTTGACATGGCAGGCAGTCAGGTGGAGATCAAGAAGGCAGAGCCAAAAAAGGCAAATCCACCTCCAGCCCCTTCAAAGAGA
TACCATGATTCAAGGCCAAGTTACAGTGGTAGCTTTGGGGGTGATGCATATGCGGAGTTTGGAGGTGGCGGGTATGGTGGTGCTTTTAGGGCAGGTGGTCCATATGGTGC
TAGAGCTGGCTATGGTGGATATGGTGGAAACGATTTTAGTGGTTATGGGATGTATGGTACTGGTGGCATTGGAGCTTACAGGGAAGATCCCTCTATGGGGTATTCTGCAC
GTTATGGAGCAGGCTTCAGCAGAGGTTATGATTTTAGAGGTGGTTATGGTGGTCCCGATGAGAGCTATGGTGCTTATAACAGTGGTGGTGCTCCTAATACCGGTGGGTAT
GCAGGCAGCTATGATATGGGCATTGGCACTGGATACCCTTCTGGTGGTAGAGGCTCCTTCTATGGAAGTAGAGGAGGAGGAGGATATGATGGTGCAGGGAGTGCTCCAAG
TGGTCGATATCATCCTTATGGACGA
mRNA sequenceShow/hide mRNA sequence
CTCGCTCCACTGTCCATGGATTCCAAACCAAACGACGCTTCCACTAATGGGGATCATCAGGACCCCAAACCCATCACCCATAAAGATGACGGACCCCCTCATGGCGACGG
AGCGAGTGCTGGGAAAATATTTGTTGGAGGGTTACCGCGGGAGACTACTTCTGCGCAATTTGTTAAACATTTTGGTGAATATGGAGCAATTACGGACTCTGTTATAATGA
AGGACCGGAAGACTGGACATCCCCGCGGTTTCGGGTTTGTGACTTATGCTGATCACTCTGTGGTAGATAAAGTCATTGAGGAGACACATGTTATTAATGGGAAACAAGTG
GAAATCAAACGAACAATACCCAAAGGGTCTTCCAGCTCTAGAGACTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTAGATGAGGCAGATGAGTTCAG
GGATTTCTTTTCGCAATATGGTGAGGTTAAGGAACACCAGATTATGCGCGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGACAGAGCAAGCAG
TTGACGATCTCTTGGCAAATGGTAACAGACTTGACATGGCAGGCAGTCAGGTGGAGATCAAGAAGGCAGAGCCAAAAAAGGCAAATCCACCTCCAGCCCCTTCAAAGAGA
TACCATGATTCAAGGCCAAGTTACAGTGGTAGCTTTGGGGGTGATGCATATGCGGAGTTTGGAGGTGGCGGGTATGGTGGTGCTTTTAGGGCAGGTGGTCCATATGGTGC
TAGAGCTGGCTATGGTGGATATGGTGGAAACGATTTTAGTGGTTATGGGATGTATGGTACTGGTGGCATTGGAGCTTACAGGGAAGATCCCTCTATGGGGTATTCTGCAC
GTTATGGAGCAGGCTTCAGCAGAGGTTATGATTTTAGAGGTGGTTATGGTGGTCCCGATGAGAGCTATGGTGCTTATAACAGTGGTGGTGCTCCTAATACCGGTGGGTAT
GCAGGCAGCTATGATATGGGCATTGGCACTGGATACCCTTCTGGTGGTAGAGGCTCCTTCTATGGAAGTAGAGGAGGAGGAGGATATGATGGTGCAGGGAGTGCTCCAAG
TGGTCGATATCATCCTTATGGACGA
Protein sequenceShow/hide protein sequence
LAPLSMDSKPNDASTNGDHQDPKPITHKDDGPPHGDGASAGKIFVGGLPRETTSAQFVKHFGEYGAITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEETHVINGKQV
EIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEADEFRDFFSQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLDMAGSQVEIKKAEPKKANPPPAPSKR
YHDSRPSYSGSFGGDAYAEFGGGGYGGAFRAGGPYGARAGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGY
AGSYDMGIGTGYPSGGRGSFYGSRGGGGYDGAGSAPSGRYHPYGR