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MS001593 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001593
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationscaffold879:184595..184753
RNA-Seq ExpressionMS001593
SyntenyMS001593
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152195.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia]1.1e-0861.82Show/hide
Query:  MNAPCEDEVEI--ANKDENVSVSPPNATTKGQNDWKRKGNADGPYVECLNCGALH
        MN PCE+EVE+    +DENV VSP  AT KGQN  K KGN D P+VE  NCGAL+
Subjt:  MNAPCEDEVEI--ANKDENVSVSPPNATTKGQNDWKRKGNADGPYVECLNCGALH

TrEMBL top hitse value%identityAlignment
A0A6J1DE70 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X16.8e-0454.72Show/hide
Query:  MNAPCEDEVEIANKDENVSVSPPNATTKGQNDWKRKGNADGPYVECLNCGALH
        MNAPCED            VSPPNATTKGQND KRK    G +V+C+ C AL+
Subjt:  MNAPCEDEVEIANKDENVSVSPPNATTKGQNDWKRKGNADGPYVECLNCGALH

A0A6J1DFA9 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X26.8e-0454.72Show/hide
Query:  MNAPCEDEVEIANKDENVSVSPPNATTKGQNDWKRKGNADGPYVECLNCGALH
        MNAPCED            VSPPNATTKGQND KRK    G +V+C+ C AL+
Subjt:  MNAPCEDEVEIANKDENVSVSPPNATTKGQNDWKRKGNADGPYVECLNCGALH

A0A6J1DGW5 zinc finger BED domain-containing protein RICESLEEPER 2-like5.4e-0961.82Show/hide
Query:  MNAPCEDEVEI--ANKDENVSVSPPNATTKGQNDWKRKGNADGPYVECLNCGALH
        MN PCE+EVE+    +DENV VSP  AT KGQN  K KGN D P+VE  NCGAL+
Subjt:  MNAPCEDEVEI--ANKDENVSVSPPNATTKGQNDWKRKGNADGPYVECLNCGALH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCCCCATGTGAAGATGAGGTTGAGATTGCGAACAAGGATGAAAATGTAAGTGTATCTCCACCAAATGCTACTACAAAAGGTCAAAACGATTGGAAGCGAAAAGG
TAATGCTGATGGTCCTTATGTCGAGTGCCTAAATTGTGGTGCTTTACAT
mRNA sequenceShow/hide mRNA sequence
ATGAATGCCCCATGTGAAGATGAGGTTGAGATTGCGAACAAGGATGAAAATGTAAGTGTATCTCCACCAAATGCTACTACAAAAGGTCAAAACGATTGGAAGCGAAAAGG
TAATGCTGATGGTCCTTATGTCGAGTGCCTAAATTGTGGTGCTTTACAT
Protein sequenceShow/hide protein sequence
MNAPCEDEVEIANKDENVSVSPPNATTKGQNDWKRKGNADGPYVECLNCGALH