; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001597 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001597
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRas-related protein Rab-2A
Genome locationscaffold879:223902..226233
RNA-Seq ExpressionMS001597
SyntenyMS001597
Gene Ontology termsGO:0030100 - regulation of endocytosis (biological process)
GO:0005768 - endosome (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145694.1 ras-related protein RABB1b [Cucumis sativus]2.5e-11297.63Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN NMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKT+AKILQNIQEGVFDVSNESSGIK+GYGRPQGPSGARD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        GTV+QRGGCCG
Subjt:  GTVSQRGGCCG

XP_008450002.1 PREDICTED: ras-related protein RABB1b [Cucumis melo]1.9e-11297.63Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN NMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKT+AKILQNIQEGVFDVSNESSGIK+GYGRPQGPSGARD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        G V+QRGGCCG
Subjt:  GTVSQRGGCCG

XP_022152162.1 ras-related protein RABB1b [Momordica charantia]2.1e-114100Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        GTVSQRGGCCG
Subjt:  GTVSQRGGCCG

XP_022989237.1 ras-related protein RABB1b [Cucurbita maxima]1.9e-11297.62Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN NMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKT+AKILQNIQEGVFDVSNESSGIK+GYGRPQGPSGARD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCC
        GTV+QRGGCC
Subjt:  GTVSQRGGCC

XP_038894253.1 ras-related protein RABB1b [Benincasa hispida]5.1e-11398.1Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN NMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKT+AKILQNIQEGVFDVSNESSGIK+GYGRPQGPSGARD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        GTV+QRGGCCG
Subjt:  GTVSQRGGCCG

TrEMBL top hitse value%identityAlignment
A0A0A0LC04 Uncharacterized protein1.2e-11297.63Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN NMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKT+AKILQNIQEGVFDVSNESSGIK+GYGRPQGPSGARD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        GTV+QRGGCCG
Subjt:  GTVSQRGGCCG

A0A1S3BMP4 ras-related protein RABB1b9.4e-11397.63Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN NMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKT+AKILQNIQEGVFDVSNESSGIK+GYGRPQGPSGARD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        G V+QRGGCCG
Subjt:  GTVSQRGGCCG

A0A5A7T4U5 Ras-related protein RABB1b9.4e-11397.63Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN NMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKT+AKILQNIQEGVFDVSNESSGIK+GYGRPQGPSGARD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        G V+QRGGCCG
Subjt:  GTVSQRGGCCG

A0A6J1DFF6 ras-related protein RABB1b1.0e-114100Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        GTVSQRGGCCG
Subjt:  GTVSQRGGCCG

A0A6J1JF93 ras-related protein RABB1b9.4e-11397.62Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN NMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKT+AKILQNIQEGVFDVSNESSGIK+GYGRPQGPSGARD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCC
        GTV+QRGGCC
Subjt:  GTVSQRGGCC

SwissProt top hitse value%identityAlignment
P36863 GTP-binding protein yptV41.0e-9279.81Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQ-GPSGAR
        LEDARQHAN NM+IML+GNK DL HRRAV+ EEGEQFAKE+GL+FLE SARTA NVEEAFI T+ +I + IQ+GVFDVSNES GIK+GYG    GP  A+
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQ-GPSGAR

Query:  --DGTVSQRGGCC
          +G   +   CC
Subjt:  --DGTVSQRGGCC

P49103 Ras-related protein Rab-2-A1.2e-9683.81Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN+NM+IMLVGNK DL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KT+  I + IQ+GVFDVSNES GIK+GY  P    GA  
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCC
        G+ SQ GGCC
Subjt:  GTVSQRGGCC

P49104 Ras-related protein Rab-2-B2.4e-9783.81Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN+NM+IMLVGNK DL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KT+  I + IQ+GVFDVSNES GIK+GY  P G SG   
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCC
         + SQ GGCC
Subjt:  GTVSQRGGCC

P92963 Ras-related protein RABB1c5.0e-10386.73Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN+NM+IML+GNK DLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKT+A I + IQ+GVFDVSNES GIK+GYG   GPSG RD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        G+ SQ GGCCG
Subjt:  GTVSQRGGCCG

Q38922 Ras-related protein RABB1b5.5e-11092.42Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN NMSIML+GNK DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+T+AKILQNIQ+GVFDVSNESSGIKIGYGR QG +G RD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        GT+SQ GGCCG
Subjt:  GTVSQRGGCCG

Arabidopsis top hitse value%identityAlignment
AT3G09900.1 RAB GTPase homolog E1E1.1e-4947.37Show/hide
Query:  YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLE
        YDYL K ++IGD+GVGKSCLLL+F+D  F      TIG++F  R V +DG+ IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T   +FN++ +W++
Subjt:  YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLE

Query:  DARQHANSNMSIMLVGNKADL-AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARDG
        +  QHA+ +++ +LVGNKAD+   +RAV   +G+  A E G+ F E SA+T QNVE+ F+  +  I Q + E   D   E  GIKI     Q  + A   
Subjt:  DARQHANSNMSIMLVGNKADL-AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARDG

Query:  TVSQRGGCC
        + +++  CC
Subjt:  TVSQRGGCC

AT4G17160.1 RAB GTPase homolog B1A4.5e-8371.7Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY Y FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ +TID +PIKLQIWDTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LE+ARQHA+ NM+ ML+GNK DL  +R VS EEGEQFA+E+GL+F+EASA+TA NVEEAF++T+A I + IQ+GV D +NE        G   GP G +D
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVS-QRGGCCG
         + S QR GCCG
Subjt:  GTVS-QRGGCCG

AT4G17170.1 RAB GTPase homolog B1C3.5e-10486.73Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN+NM+IML+GNK DLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKT+A I + IQ+GVFDVSNES GIK+GYG   GPSG RD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        G+ SQ GGCCG
Subjt:  GTVSQRGGCCG

AT4G35860.1 GTP-binding 23.9e-11192.42Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD
        LEDARQHAN NMSIML+GNK DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+T+AKILQNIQ+GVFDVSNESSGIKIGYGR QG +G RD
Subjt:  LEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARD

Query:  GTVSQRGGCCG
        GT+SQ GGCCG
Subjt:  GTVSQRGGCCG

AT4G35860.2 GTP-binding 25.0e-8290.3Show/hide
Query:  MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFL
        MVT+DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMSIML+GNK DLAH+RAVSKEEG+QFAKE+GLLFL
Subjt:  MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFL

Query:  EASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARDGTVSQRGGCCG
        EASARTAQNVEEAFI+T+AKILQNIQ+GVFDVSNESSGIKIGYGR QG +G RDGT+SQ GGCCG
Subjt:  EASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARDGTVSQRGGCCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTACGATTACCTCTTCAAGTACATAATCATTGGCGATACAGGTGTGGGGAAATCCTGCTTGTTGTTGCAGTTCACGGACAAGAGGTTTCAGCCTGTTCACGATCT
CACCATCGGCGTTGAGTTTGGTGCTCGTATGGTCACCATTGATGGCCGTCCTATTAAGCTTCAGATATGGGATACTGCTGGGCAAGAATCATTTAGATCGATCACAAGAT
CTTACTACCGGGGAGCAGCTGGTGCATTGTTGGTTTATGATATAACTAGGAGAGAGACATTCAATCACTTGGCAAGCTGGTTGGAGGATGCTCGCCAGCATGCAAATTCC
AATATGTCAATTATGCTCGTCGGGAACAAGGCTGATCTCGCTCATCGAAGAGCTGTAAGCAAAGAAGAGGGAGAACAATTTGCAAAAGAAAATGGACTCTTATTCTTAGA
GGCATCTGCTAGAACAGCTCAGAATGTTGAGGAGGCATTCATAAAGACTTCAGCGAAAATACTTCAAAATATTCAAGAAGGTGTCTTTGATGTATCCAATGAGTCATCTG
GAATCAAGATCGGTTATGGACGCCCTCAAGGGCCATCGGGGGCCAGAGATGGAACAGTTTCACAGAGAGGTGGATGTTGTGGG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTACGATTACCTCTTCAAGTACATAATCATTGGCGATACAGGTGTGGGGAAATCCTGCTTGTTGTTGCAGTTCACGGACAAGAGGTTTCAGCCTGTTCACGATCT
CACCATCGGCGTTGAGTTTGGTGCTCGTATGGTCACCATTGATGGCCGTCCTATTAAGCTTCAGATATGGGATACTGCTGGGCAAGAATCATTTAGATCGATCACAAGAT
CTTACTACCGGGGAGCAGCTGGTGCATTGTTGGTTTATGATATAACTAGGAGAGAGACATTCAATCACTTGGCAAGCTGGTTGGAGGATGCTCGCCAGCATGCAAATTCC
AATATGTCAATTATGCTCGTCGGGAACAAGGCTGATCTCGCTCATCGAAGAGCTGTAAGCAAAGAAGAGGGAGAACAATTTGCAAAAGAAAATGGACTCTTATTCTTAGA
GGCATCTGCTAGAACAGCTCAGAATGTTGAGGAGGCATTCATAAAGACTTCAGCGAAAATACTTCAAAATATTCAAGAAGGTGTCTTTGATGTATCCAATGAGTCATCTG
GAATCAAGATCGGTTATGGACGCCCTCAAGGGCCATCGGGGGCCAGAGATGGAACAGTTTCACAGAGAGGTGGATGTTGTGGG
Protein sequenceShow/hide protein sequence
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANS
NMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTSAKILQNIQEGVFDVSNESSGIKIGYGRPQGPSGARDGTVSQRGGCCG