; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001600 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001600
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNET domain-containing protein
Genome locationscaffold879:248263..248551
RNA-Seq ExpressionMS001600
SyntenyMS001600
Gene Ontology termsNA
InterPro domainsIPR027353 - NET domain
IPR038336 - NET domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450000.1 PREDICTED: uncharacterized protein LOC103491717 [Cucumis melo]2.8e-2384.72Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEI-IQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS
        MTFKEKEQLQKLIQELP EN  RVAEI IQHRTD+T+ SGEI++DLDKENN TLWRLYYYVEAVEKAK LAS
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEI-IQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS

XP_022152181.1 uncharacterized protein LOC111019964 [Momordica charantia]6.3e-3197.22Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLASG
        MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSS EIYVDLDKENNITLWRLYYYVEAVEKAKNL SG
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLASG

XP_022989555.1 bromodomain-containing protein 4A-like isoform X1 [Cucurbita maxima]2.8e-2380.28Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS
        MTFKEKEQLQK+IQ LPP+N GR+A+IIQH TDET+SS EI++DLDK NN TLWRLYYYVEAVEKAK LAS
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS

XP_022989556.1 bromodomain-containing protein 4A-like isoform X2 [Cucurbita maxima]2.8e-2380.28Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS
        MTFKEKEQLQK+IQ LPP+N GR+A+IIQH TDET+SS EI++DLDK NN TLWRLYYYVEAVEKAK LAS
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS

XP_023529857.1 bromodomain-containing protein 4-like [Cucurbita pepo subsp. pepo]9.8e-2483.1Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS
        MTFKEKEQLQK+IQ LPP+N GRVAEIIQH TDET+SS EI++DLDK NN TLWRLYYYVEAVEKAK LAS
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS

TrEMBL top hitse value%identityAlignment
A0A1S3BNY6 uncharacterized protein LOC1034917171.4e-2384.72Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEI-IQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS
        MTFKEKEQLQKLIQELP EN  RVAEI IQHRTD+T+ SGEI++DLDKENN TLWRLYYYVEAVEKAK LAS
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEI-IQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS

A0A6J1DGV0 uncharacterized protein LOC1110199643.1e-3197.22Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLASG
        MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSS EIYVDLDKENNITLWRLYYYVEAVEKAKNL SG
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLASG

A0A6J1EJL2 bromodomain-containing protein 4-like isoform X23.1e-2381.69Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS
        MTFKEKEQLQK+IQ LPP+N GRVAEIIQH TDET+SS EI++DLDK NN TLWRLYYYV AVEKAK LAS
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS

A0A6J1JG61 bromodomain-containing protein 4A-like isoform X21.4e-2380.28Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS
        MTFKEKEQLQK+IQ LPP+N GR+A+IIQH TDET+SS EI++DLDK NN TLWRLYYYVEAVEKAK LAS
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS

A0A6J1JMP5 bromodomain-containing protein 4A-like isoform X11.4e-2380.28Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS
        MTFKEKEQLQK+IQ LPP+N GR+A+IIQH TDET+SS EI++DLDK NN TLWRLYYYVEAVEKAK LAS
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS

SwissProt top hitse value%identityAlignment
Q7Y214 Transcription factor GTE75.2e-0436.36Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSG-EIYVDLDKENNITLWRLYYYVEAVEK
        MT +EK +L   +Q+LPPE  G++ +I++ R       G EI +D++  +N TLW L  +V   +K
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSG-EIYVDLDKENNITLWRLYYYVEAVEK

Q9LXA7 Transcription factor GTE23.1e-0439.39Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSG-EIYVDLDKENNITLWRLYYYVEAVEK
        MT  EK +L   +QELPPE  G++ +I++ RT +    G EI +D++  +N TLW L  +V    K
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSG-EIYVDLDKENNITLWRLYYYVEAVEK

Q9S7T1 Transcription factor GTE3, chloroplastic9.0e-0437.5Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDE-TNSSGEIYVDLDKENNITLWRLYYYV----EAVEKAK
        +TF EK QL + +Q+LP +    V +II+ RT E +    EI +D+D  +  TLW L+ +V    E++ K K
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDE-TNSSGEIYVDLDKENNITLWRLYYYV----EAVEKAK

Arabidopsis top hitse value%identityAlignment
AT1G73150.1 global transcription factor group E36.4e-0537.5Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDE-TNSSGEIYVDLDKENNITLWRLYYYV----EAVEKAK
        +TF EK QL + +Q+LP +    V +II+ RT E +    EI +D+D  +  TLW L+ +V    E++ K K
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDE-TNSSGEIYVDLDKENNITLWRLYYYV----EAVEKAK

AT3G27420.1 unknown protein4.0e-0738.57Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHR--TDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKN
        MT  E  +LQK I+ELP  N  RVAEI+ +       + + ++ V+LD+ + + LWRL++YV AV++ ++
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHR--TDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKN

AT5G10550.1 global transcription factor group E22.2e-0539.39Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSG-EIYVDLDKENNITLWRLYYYVEAVEK
        MT  EK +L   +QELPPE  G++ +I++ RT +    G EI +D++  +N TLW L  +V    K
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSG-EIYVDLDKENNITLWRLYYYVEAVEK

AT5G40600.1 unknown protein1.4e-0739.19Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHR---TDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS
        M+  EK  LQK I+ELP +N  RVA II++      +        +++++E+ + LWRL+Y+V AV+ A+ LAS
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHR---TDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLAS

AT5G65630.1 global transcription factor group E73.7e-0536.36Show/hide
Query:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSG-EIYVDLDKENNITLWRLYYYVEAVEK
        MT +EK +L   +Q+LPPE  G++ +I++ R       G EI +D++  +N TLW L  +V   +K
Subjt:  MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSG-EIYVDLDKENNITLWRLYYYVEAVEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTTCAAGGAAAAGGAACAGCTTCAGAAACTCATTCAGGAGCTTCCACCAGAAAATTGTGGTCGTGTTGCAGAAATTATCCAACATAGGACAGATGAAACGAACTC
CTCTGGTGAAATCTATGTTGATTTGGATAAAGAGAATAACATCACTCTCTGGCGATTGTATTACTACGTTGAAGCAGTTGAGAAAGCAAAGAACCTTGCATCGGGA
mRNA sequenceShow/hide mRNA sequence
ATGACCTTCAAGGAAAAGGAACAGCTTCAGAAACTCATTCAGGAGCTTCCACCAGAAAATTGTGGTCGTGTTGCAGAAATTATCCAACATAGGACAGATGAAACGAACTC
CTCTGGTGAAATCTATGTTGATTTGGATAAAGAGAATAACATCACTCTCTGGCGATTGTATTACTACGTTGAAGCAGTTGAGAAAGCAAAGAACCTTGCATCGGGA
Protein sequenceShow/hide protein sequence
MTFKEKEQLQKLIQELPPENCGRVAEIIQHRTDETNSSGEIYVDLDKENNITLWRLYYYVEAVEKAKNLASG