CuGenDBv2

Gene ID	MS001637
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Genome location	scaffold377:252388..252501
RNA-Seq Expression	MS001637
Synteny	MS001637
Gene Ontology terms	GO:0006633 - fatty acid biosynthetic process (biological process) GO:2001295 - malonyl-CoA biosynthetic process (biological process) GO:0009317 - acetyl-CoA carboxylase complex (cellular component) GO:0009570 - chloroplast stroma (cellular component) GO:0003989 - acetyl-CoA carboxylase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0016743 - carboxyl- or carbamoyltransferase activity (molecular function)
InterPro domains	IPR011762 - Acetyl-coenzyme A carboxyltransferase, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

AXU40578.1 acetyl-CoA carboxylase carbosyltransferase beta subunit [Gomphogyne cissiformis var. cissiformis]

4.2e-10

92.11

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

QJA16152.1 acetyl-CoA carboxylase carboxyltransferase beta subunit [Siraitia grosvenorii]

4.2e-10

92.11

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

YP_009236289.1 acetyl-CoA carboxylase carboxyltransferase beta subunit [Gynostemma pentaphyllum]

4.2e-10

92.11

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

YP_009317395.1 acetyl-CoA carboxylase beta subunit [Coccinia grandis]

4.2e-10

92.11

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

YP_009752590.1 acetyl-CoA carboxylase subunit beta [Trichosanthes homophylla]

4.2e-10

92.11

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

TrEMBL top hits

e value

%identity

Alignment

A0A191T480 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

2.1e-10

92.11

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

A0A1P8LFN2 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta

2.1e-10

92.11

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

A0A6H0ES03 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

2.1e-10

92.11

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

A0A7H1DM09 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

2.1e-10

92.11

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

D3WD48 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta

2.1e-10

92.11

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

SwissProt top hits

e value

%identity

Alignment

A0ZZ44 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

4.7e-12

86.84

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKT+PE SQAAEYLFHK LFD IVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

A6MMV3 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

3.6e-12

86.84

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTL KT+PE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

B1A944 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

2.8e-12

89.47

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFD IVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

Q06GQ1 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

5.6e-13

92.11

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKTVPE SQAAEYLFHK LFDLIVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

Q2L915 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

4.7e-12

86.84

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTLNKT+PE SQAAEYLFHK LFD IVP NPLK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

Arabidopsis top hits

e value

%identity

Alignment

ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta

9.4e-08

71.05

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Query:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK
        KRVIEQTL K VPE SQAAE L  K L D IVP N LK
Subjt:  KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

Sequences

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CDS sequence

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AAAAGAGTAATTGAACAAACATTGAATAAGACAGTTCCTGAAAGTTCACAGGCAGCTGAATATTTATTCCATAAGGACTTATTCGACCTAATCGTACCACATAATCCTTT
AAAA

mRNA sequence

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AAAAGAGTAATTGAACAAACATTGAATAAGACAGTTCCTGAAAGTTCACAGGCAGCTGAATATTTATTCCATAAGGACTTATTCGACCTAATCGTACCACATAATCCTTT
AAAA

Protein sequence

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KRVIEQTLNKTVPESSQAAEYLFHKDLFDLIVPHNPLK

MS001637 (gene) of Bitter gourd (TR) v1 genome