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MS001641 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001641
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold377:349383..349580
RNA-Seq ExpressionMS001641
SyntenyMS001641
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155289.1 uncharacterized protein LOC111022426 [Momordica charantia]3.8e-0658.18Show/hide
Query:  DENNTIQAALFSSHPLLNPILVEILAIRERLRLASRMGFPKVVTESDSLEAVNLI
        D N  I AA+   H +  P+L EILAIRE LRLA+R+G  +V+ ESDSLEA+NLI
Subjt:  DENNTIQAALFSSHPLLNPILVEILAIRERLRLASRMGFPKVVTESDSLEAVNLI
XP_022158489.1 uncharacterized protein LOC111024968 [Momordica charantia]7.9e-0452.83Show/hide
Query:  NNTIQAALFSSHPLLNPILVEILAIRERLRLASRMGFPKVVTESDSLEAVNLI
        N  I  A+   H +  P+L +ILAIRE L LA+R+G  +VV E+DSLEA+NLI
Subjt:  NNTIQAALFSSHPLLNPILVEILAIRERLRLASRMGFPKVVTESDSLEAVNLI
TrEMBL top hitse value%identityAlignment
A0A6J1DPU1 uncharacterized protein LOC1110224261.8e-0658.18Show/hide
Query:  DENNTIQAALFSSHPLLNPILVEILAIRERLRLASRMGFPKVVTESDSLEAVNLI
        D N  I AA+   H +  P+L EILAIRE LRLA+R+G  +V+ ESDSLEA+NLI
Subjt:  DENNTIQAALFSSHPLLNPILVEILAIRERLRLASRMGFPKVVTESDSLEAVNLI
A0A6J1DZK3 uncharacterized protein LOC1110249683.8e-0452.83Show/hide
Query:  NNTIQAALFSSHPLLNPILVEILAIRERLRLASRMGFPKVVTESDSLEAVNLI
        N  I  A+   H +  P+L +ILAIRE L LA+R+G  +VV E+DSLEA+NLI
Subjt:  NNTIQAALFSSHPLLNPILVEILAIRERLRLASRMGFPKVVTESDSLEAVNLI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTGGGATGAGAACAATACTATTCAGGCGGCTCTTTTCTCGTCCCATCCTCTCCTTAACCCGATTTTGGTAGAAATTTTGGCGATTCGAGAGAGGCTTCGTCTGGCTTC
TCGGATGGGGTTCCCCAAAGTTGTGACGGAGTCGGATTCACTGGAAGCTGTTAACCTGATCACCAGTGAGGAAGTTATTCACAACGAG
mRNA sequenceShow/hide mRNA sequence
ATTTGGGATGAGAACAATACTATTCAGGCGGCTCTTTTCTCGTCCCATCCTCTCCTTAACCCGATTTTGGTAGAAATTTTGGCGATTCGAGAGAGGCTTCGTCTGGCTTC
TCGGATGGGGTTCCCCAAAGTTGTGACGGAGTCGGATTCACTGGAAGCTGTTAACCTGATCACCAGTGAGGAAGTTATTCACAACGAG
Protein sequenceShow/hide protein sequence
IWDENNTIQAALFSSHPLLNPILVEILAIRERLRLASRMGFPKVVTESDSLEAVNLITSEEVIHNE