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MS001709 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001709
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome c oxidase assembly factor 4-like protein
Genome locationscaffold571:412737..413032
RNA-Seq ExpressionMS001709
SyntenyMS001709
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153368.1 cytochrome c oxidase assembly factor 4 homolog, mitochondrial isoform X2 [Cucumis sativus]2.5e-2085.45Show/hide
Query:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
        MGKPP+SPENQPP HRSDADD+DENV+QLNECSS YLSLQ+CLIKT+RNWK+CQA
Subjt:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
XP_008458528.1 PREDICTED: cytochrome c oxidase assembly factor 4 homolog, mitochondrial [Cucumis melo]7.4e-2083.64Show/hide
Query:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
        MGKPP+SPEN+PP HRSDADD+DENV+QLNECSS YLSLQ+CLIKT+RNWK+CQA
Subjt:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
XP_011656645.1 uncharacterized protein LOC101215408 isoform X1 [Cucumis sativus]2.5e-2085.45Show/hide
Query:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
        MGKPP+SPENQPP HRSDADD+DENV+QLNECSS YLSLQ+CLIKT+RNWK+CQA
Subjt:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
XP_022138658.1 uncharacterized protein LOC111009761 [Momordica charantia]1.1e-23100Show/hide
Query:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
        MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
Subjt:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
XP_038874602.1 uncharacterized protein LOC120067191 [Benincasa hispida]5.7e-2087.27Show/hide
Query:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
        MGKPP SPENQPP HRSDA+DDDENV+QLNECSS YLSLQ+CLIKT+RNWKACQA
Subjt:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
TrEMBL top hitse value%identityAlignment
A0A0A0KEH3 Uncharacterized protein1.2e-2085.45Show/hide
Query:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
        MGKPP+SPENQPP HRSDADD+DENV+QLNECSS YLSLQ+CLIKT+RNWK+CQA
Subjt:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
A0A1S3C8M5 cytochrome c oxidase assembly factor 4 homolog, mitochondrial3.6e-2083.64Show/hide
Query:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
        MGKPP+SPEN+PP HRSDADD+DENV+QLNECSS YLSLQ+CLIKT+RNWK+CQA
Subjt:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
A0A5A7SQI1 Cytochrome c oxidase assembly factor 4-like protein3.6e-2083.64Show/hide
Query:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
        MGKPP+SPEN+PP HRSDADD+DENV+QLNECSS YLSLQ+CLIKT+RNWK+CQA
Subjt:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
A0A6J1CDM7 uncharacterized protein LOC1110097615.3e-24100Show/hide
Query:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
        MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
Subjt:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
A0A6J1L1R2 uncharacterized protein LOC1114990628.8e-1983.64Show/hide
Query:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
        MG PP+SPENQPP H SDAD DDENV+QLNECSS YLSLQECLIKT+RNWK CQA
Subjt:  MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18920.1 Cox19-like CHCH family protein2.2e-1472.09Show/hide
Query:  PPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQ
        PP H+ DADDDDENV+QL ECSSLYLSLQ+CL+ ++R+WK+CQ
Subjt:  PPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAACCGCCGGTTTCGCCGGAGAATCAGCCACCTTTTCACCGGAGCGACGCCGACGACGACGATGAGAACGTGAGGCAGCTCAACGAATGCTCATCCTTATACTT
ATCCTTGCAGGAATGTCTGATCAAAACTGATAGGAACTGGAAAGCTTGCCAGGCTGGTATGCCGCTCATCTCTAAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAACCGCCGGTTTCGCCGGAGAATCAGCCACCTTTTCACCGGAGCGACGCCGACGACGACGATGAGAACGTGAGGCAGCTCAACGAATGCTCATCCTTATACTT
ATCCTTGCAGGAATGTCTGATCAAAACTGATAGGAACTGGAAAGCTTGCCAGGCTGGTATGCCGCTCATCTCTAAA
Protein sequenceShow/hide protein sequence
MGKPPVSPENQPPFHRSDADDDDENVRQLNECSSLYLSLQECLIKTDRNWKACQAGMPLISK