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MS001716 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001716
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLow-density receptor-like protein
Genome locationscaffold571:453103..453467
RNA-Seq ExpressionMS001716
SyntenyMS001716
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593936.1 hypothetical protein SDJN03_13412, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3487.23Show/hide
Query:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQV
        MASS  RITFRV+MVV+LLLVI YVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSGVH   D KK GSVA RRLLHQV
Subjt:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQV
XP_022138556.1 uncharacterized protein LOC111009689 [Momordica charantia]5.1e-4198.91Show/hide
Query:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDEKKVGSVATRRLLHQVL
        MASSTGRITFRVLMVVLLLLVI YVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDEKKVGSVATRRLLHQVL
Subjt:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDEKKVGSVATRRLLHQVL
XP_022930338.1 uncharacterized protein LOC111436812 isoform X3 [Cucurbita moschata]1.6e-3486.17Show/hide
Query:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQV
        MASS  RITFRV+MVV+LLLVI YVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSGVH   D KK GSVA RRLLHQ+
Subjt:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQV
XP_038875265.1 uncharacterized protein LOC120067764 isoform X1 [Benincasa hispida]1.4e-3588.42Show/hide
Query:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQVL
        MASST RITFRV+MVV LLLV  YVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH   D KK GSVA RRLLHQVL
Subjt:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQVL
XP_038875268.1 uncharacterized protein LOC120067764 isoform X2 [Benincasa hispida]9.2e-3587.23Show/hide
Query:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQV
        MASST RITFRV+MVV LLLV  YVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH   D KK GSVA RRLLHQ+
Subjt:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQV
TrEMBL top hitse value%identityAlignment
A0A0A0KBE9 Uncharacterized protein3.4e-3586.32Show/hide
Query:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQVL
        MASST +ITFRV+MVV+LLLV+ YVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH   D KK GS A RRLLHQVL
Subjt:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQVL
A0A1S3C994 uncharacterized protein LOC103497900 isoform X11.0e-3486.17Show/hide
Query:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV---HDEKKVGSVATRRLLHQV
        MASST +ITFRV+MVV+LLLV+ YVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV   +D KK GSVA RRLLHQV
Subjt:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV---HDEKKVGSVATRRLLHQV
A0A6J1CA23 uncharacterized protein LOC1110096892.4e-4198.91Show/hide
Query:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDEKKVGSVATRRLLHQVL
        MASSTGRITFRVLMVVLLLLVI YVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDEKKVGSVATRRLLHQVL
Subjt:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDEKKVGSVATRRLLHQVL
A0A6J1EUV5 uncharacterized protein LOC111436812 isoform X37.6e-3586.17Show/hide
Query:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQV
        MASS  RITFRV+MVV+LLLVI YVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSGVH   D KK GSVA RRLLHQ+
Subjt:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQV
A0A6J1EWN5 uncharacterized protein LOC111436812 isoform X51.3e-3486.17Show/hide
Query:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQV
        MASS  RITFRV+MVV+LLLVI YVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSGVH   D KK GSVA RRLLHQ+
Subjt:  MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVH---DEKKVGSVATRRLLHQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18850.1 unknown protein1.3e-2664.04Show/hide
Query:  ASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHD--EKKVGSVATRRLL
        +S T RI FR ++++ L++V+ YVGRPLYWKISAT+HDIR NKQ+V+EG+SQIV EAQ+SVGWYHDESDSG  +   KK G   +RRLL
Subjt:  ASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHD--EKKVGSVATRRLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGTCGACTGGTAGGATTACGTTTCGCGTTCTCATGGTGGTGCTCCTCCTCCTTGTCATTTTGTATGTCGGTCGTCCTCTGTACTGGAAAATTTCCGCAACTGT
CCATGATATTCGCCAGAACAAACAGACCGTCAAAGAAGGTCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCC
ATGATGAAAAGAAGGTCGGATCGGTTGCTACTCGGAGGCTGCTTCATCAGGTTTTG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGTCGACTGGTAGGATTACGTTTCGCGTTCTCATGGTGGTGCTCCTCCTCCTTGTCATTTTGTATGTCGGTCGTCCTCTGTACTGGAAAATTTCCGCAACTGT
CCATGATATTCGCCAGAACAAACAGACCGTCAAAGAAGGTCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCC
ATGATGAAAAGAAGGTCGGATCGGTTGCTACTCGGAGGCTGCTTCATCAGGTTTTG
Protein sequenceShow/hide protein sequence
MASSTGRITFRVLMVVLLLLVILYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDEKKVGSVATRRLLHQVL