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MS001718 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001718
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B
Genome locationscaffold571:461962..466204
RNA-Seq ExpressionMS001718
SyntenyMS001718
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR010625 - CHCH
IPR016680 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026281.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-5193.4Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        MA+AVDAAG+PIPTSAVLMSS+KHIANMCRSENVAYLQCK+KD NPEKCL+KGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        K CPLE
Subjt:  KGCPLE

XP_004135555.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus]1.5e-4992.45Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        MASAVDAAG+PIPTSAVLMSS+KHIA  CRSENVAYLQCK+KD NPEKCLDKG QVTRCVLSLLKDLHQRCTKEMDAYVGCMYY+TNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        KGCPLE
Subjt:  KGCPLE

XP_022138355.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Momordica charantia]3.5e-54100Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        KGCPLE
Subjt:  KGCPLE

XP_022930219.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata]2.1e-5194.34Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        MASAVDAAG+PIPTSAVLMSS+KHIANMCRSENVAYLQCK+KD NPEKCL+KGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        K CPLE
Subjt:  KGCPLE

XP_022958837.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata]1.6e-5194.34Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        MASAVDAAG+PIPTSAVLMSS+KHIANMCRSENVAYLQCK+KD NPEKCLDKGQQVTRCVLSLLKDLHQRCTK+MDAYVGCMYYNTNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        K CPLE
Subjt:  KGCPLE

TrEMBL top hitse value%identityAlignment
A0A6J1C988 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B1.7e-54100Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        KGCPLE
Subjt:  KGCPLE

A0A6J1EWD6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like1.0e-5194.34Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        MASAVDAAG+PIPTSAVLMSS+KHIANMCRSENVAYLQCK+KD NPEKCL+KGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        K CPLE
Subjt:  KGCPLE

A0A6J1H2X4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like7.9e-5294.34Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        MASAVDAAG+PIPTSAVLMSS+KHIANMCRSENVAYLQCK+KD NPEKCLDKGQQVTRCVLSLLKDLHQRCTK+MDAYVGCMYYNTNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        K CPLE
Subjt:  KGCPLE

A0A6J1KIR7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like1.0e-5194.34Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        MASAVDAAG+PIPTSAVLMSS+KHIANMCRSENVAYLQCK+KD NPEKCL+KGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        K CPLE
Subjt:  KGCPLE

A0A6J1KXR2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like7.9e-5294.34Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        MASAVDAAG+PIPTSAVLMSS+KHIANMCRSENVAYLQCK+KD NPEKCLDKGQQVTRCVLSLLKDLHQRCTK+MDAYVGCMYYNTNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        K CPLE
Subjt:  KGCPLE

SwissProt top hitse value%identityAlignment
Q8LGE7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B1.7e-4378.3Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        M+SAVDA G PIPTSAVL +SAKHI   C  ENVA+L+CKK D NPEKCLDKG+ VTRCVL LLKDLHQ+C KEMD YVGCMYY TNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        K CPL+
Subjt:  KGCPLE

Q9SQT4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A9.3e-4275.96Show/hide
Query:  SAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKG
        +AVD  G PIPTSAVL +SAKHI   C  EN+A+L+CKK D NPEKCL+KG+ VTRCVL LLKDLHQRC KEMDAYVGCMYY TNEF+LCRKEQEAFEK 
Subjt:  SAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKG

Query:  CPLE
        CPL+
Subjt:  CPLE

Arabidopsis top hitse value%identityAlignment
AT3G06310.1 Cox19-like CHCH family protein6.6e-4375.96Show/hide
Query:  SAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKG
        +AVD  G PIPTSAVL +SAKHI   C  EN+A+L+CKK D NPEKCL+KG+ VTRCVL LLKDLHQRC KEMDAYVGCMYY TNEF+LCRKEQEAFEK 
Subjt:  SAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKG

Query:  CPLE
        CPL+
Subjt:  CPLE

AT3G06310.2 Cox19-like CHCH family protein1.3e-1767.21Show/hide
Query:  SAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSL
        +AVD  G PIPTSAVL +SAKHI   C  EN+A+L+CKK D NPEKCL+KG+ VTRCVL L
Subjt:  SAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSL

AT3G06310.3 Cox19-like CHCH family protein6.6e-4375.96Show/hide
Query:  SAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKG
        +AVD  G PIPTSAVL +SAKHI   C  EN+A+L+CKK D NPEKCL+KG+ VTRCVL LLKDLHQRC KEMDAYVGCMYY TNEF+LCRKEQEAFEK 
Subjt:  SAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKG

Query:  CPLE
        CPL+
Subjt:  CPLE

AT5G18800.1 Cox19-like CHCH family protein1.2e-4478.3Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        M+SAVDA G PIPTSAVL +SAKHI   C  ENVA+L+CKK D NPEKCLDKG+ VTRCVL LLKDLHQ+C KEMD YVGCMYY TNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        K CPL+
Subjt:  KGCPLE

AT5G18800.2 Cox19-like CHCH family protein1.2e-4478.3Show/hide
Query:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE
        M+SAVDA G PIPTSAVL +SAKHI   C  ENVA+L+CKK D NPEKCLDKG+ VTRCVL LLKDLHQ+C KEMD YVGCMYY TNEFDLCRKEQEAFE
Subjt:  MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFE

Query:  KGCPLE
        K CPL+
Subjt:  KGCPLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGCAGTAGATGCTGCAGGAGAGCCAATTCCTACATCGGCGGTGCTAATGTCGTCGGCAAAGCACATTGCGAACATGTGTCGATCGGAGAATGTGGCATACCT
CCAGTGCAAAAAGAAGGATGCGAACCCGGAGAAATGCCTCGACAAAGGCCAACAAGTCACTCGCTGCGTCCTTTCTCTGCTTAAAGATCTTCATCAAAGGTGCACGAAAG
AGATGGATGCTTATGTCGGTTGCATGTACTACAATACTAACGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGGATGTCCCTTAGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCGCAGTAGATGCTGCAGGAGAGCCAATTCCTACATCGGCGGTGCTAATGTCGTCGGCAAAGCACATTGCGAACATGTGTCGATCGGAGAATGTGGCATACCT
CCAGTGCAAAAAGAAGGATGCGAACCCGGAGAAATGCCTCGACAAAGGCCAACAAGTCACTCGCTGCGTCCTTTCTCTGCTTAAAGATCTTCATCAAAGGTGCACGAAAG
AGATGGATGCTTATGTCGGTTGCATGTACTACAATACTAACGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGGATGTCCCTTAGAA
Protein sequenceShow/hide protein sequence
MASAVDAAGEPIPTSAVLMSSAKHIANMCRSENVAYLQCKKKDANPEKCLDKGQQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKGCPLE