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MS001723 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001723
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold571:490997..491377
RNA-Seq ExpressionMS001723
SyntenyMS001723
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY36063.1 hypothetical protein CUMW_020050 [Citrus unshiu]1.1e-0634.59Show/hide
Query:  DGSSFFVWEDSADSEVDKLPFYPRPGEE-SAVDDQEDARSCSCDDAGERSRAVDFQDDGDDADDGDHGVGGPDQLDGR----------WSVAAAGEEEEE
        D SSF + E+SADSEVD L       +   A  D++DA SCSCD    ++  +D+  D  + +  D G G       +          W+ AA  EEE  
Subjt:  DGSSFFVWEDSADSEVDKLPFYPRPGEE-SAVDDQEDARSCSCDDAGERSRAVDFQDDGDDADDGDHGVGGPDQLDGR----------WSVAAAGEEEEE

Query:  LEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP
              N  + R + + +ED++FW+TCMA GYP
Subjt:  LEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP

KAA0033453.1 hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa]7.8e-2459.42Show/hide
Query:  MDQMKDGSSFFVWEDSADSEVDKLPFYPRPGEESAV--DDQEDARSCSC---DDAGERSRAVDFQDDGDDAD-DGDH-----GVGGPDQLDGRWSVAAAG
        MDQ+KD SSFF+WEDSADSEVDKL  +P    ESAV  DDQEDA SCSC   D + +  RA+DFQDDGD+ D D D      G GG  +           
Subjt:  MDQMKDGSSFFVWEDSADSEVDKLPFYPRPGEESAV--DDQEDARSCSC---DDAGERSRAVDFQDDGDDAD-DGDH-----GVGGPDQLDGRWSVAAAG

Query:  EEEEELEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP
        EEEEE E  S +VGVIRNMNE +EDK+FWDTCMAGGYP
Subjt:  EEEEELEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP

KAE8646684.1 hypothetical protein Csa_005604 [Cucumis sativus]3.0e-1558.82Show/hide
Query:  SADSEVDKLPFYPRPGEESAV---DDQEDARSCSCDDAGERSRAVDFQD--DGDDADDGDHGVGGPDQLDGRWSVAAAGEEEEELEGESCN--VGVIRNM
        SADSEVDKL  +P    ESAV   DDQEDA SCSC++        DFQD  DGD+  DGD  +G       R S A   EEEEE E ES N  VG IRNM
Subjt:  SADSEVDKLPFYPRPGEESAV---DDQEDARSCSCDDAGERSRAVDFQD--DGDDADDGDHGVGGPDQLDGRWSVAAAGEEEEELEGESCN--VGVIRNM

Query:  NEIVEDKVFWDTCMAGGYP
        NE +EDKVFWDTCMAGGYP
Subjt:  NEIVEDKVFWDTCMAGGYP

KAG6575041.1 hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2154.14Show/hide
Query:  MKDGSSFFVWEDSADSEVDKLPFYPRPGEESAVDDQEDARSCSCDDAGERSRAVDFQDDGDDADDGDHGVGGPD----QLD-----GRWSVAAAGEEEEE
        M + SS F+WED+ADSEVD+L  +P    ESAVDD EDARSCSCDD      AVD QDDGD  +D   G  G D     LD     G     ++ E+EEE
Subjt:  MKDGSSFFVWEDSADSEVDKLPFYPRPGEESAVDDQEDARSCSCDDAGERSRAVDFQDDGDDADDGDHGVGGPD----QLD-----GRWSVAAAGEEEEE

Query:  LEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP
         E  + NVG IR+MNE +EDK+FWDTCM GGYP
Subjt:  LEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP

KDO74975.1 hypothetical protein CISIN_1g032474mg [Citrus sinensis]4.3e-0635.34Show/hide
Query:  DGSSFFVWEDSADSEVDKLPFYPRPGEE-SAVDDQEDARSCSCDDAGERSRAVD---------FQDDGDDADDGDH-GVGGPDQLDGRWSVAAAGEEEEE
        D SSF + E+SADSEVD L       +   A  D++DA SCSCD    ++  +D         F DDGD +    H  +         W+  A  EEE  
Subjt:  DGSSFFVWEDSADSEVDKLPFYPRPGEE-SAVDDQEDARSCSCDDAGERSRAVD---------FQDDGDDADDGDH-GVGGPDQLDGRWSVAAAGEEEEE

Query:  LEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP
              N  + R + + +ED++FW+TCMA GYP
Subjt:  LEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP

TrEMBL top hitse value%identityAlignment
A0A059B4L9 Uncharacterized protein3.5e-0638.17Show/hide
Query:  SSFFVWEDSADSEVDKLPFYPRPGEESAV---DDQEDARSCSCDD---AGERSRAVDFQDDGDDADDGDHG---VGGPDQLDGRWSVAAAGEEEEELE--
        SS+ + E+SADSE D +       E +A+    D +DA SCSCD    +G     VD QD GD  ++  HG   V   D+ DG  S+    E+E  +   
Subjt:  SSFFVWEDSADSEVDKLPFYPRPGEESAV---DDQEDARSCSCDD---AGERSRAVDFQDDGDDADDGDHG---VGGPDQLDGRWSVAAAGEEEEELE--

Query:  GESCNVGVIRNMNEIVEDKVFWDTCMAGGYP
        G S   G+ +   + +EDK FW+TCMA GYP
Subjt:  GESCNVGVIRNMNEIVEDKVFWDTCMAGGYP

A0A067G8N3 Uncharacterized protein2.1e-0635.34Show/hide
Query:  DGSSFFVWEDSADSEVDKLPFYPRPGEE-SAVDDQEDARSCSCDDAGERSRAVD---------FQDDGDDADDGDH-GVGGPDQLDGRWSVAAAGEEEEE
        D SSF + E+SADSEVD L       +   A  D++DA SCSCD    ++  +D         F DDGD +    H  +         W+  A  EEE  
Subjt:  DGSSFFVWEDSADSEVDKLPFYPRPGEE-SAVDDQEDARSCSCDDAGERSRAVD---------FQDDGDDADDGDH-GVGGPDQLDGRWSVAAAGEEEEE

Query:  LEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP
              N  + R + + +ED++FW+TCMA GYP
Subjt:  LEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP

A0A0A0KBF3 Uncharacterized protein1.1e-2361.19Show/hide
Query:  MDQMKDGSSFFVWEDSADSEVDKLPFYPRPGEESAV---DDQEDARSCSCDDAGERSRAVDFQD--DGDDADDGDHGVGGPDQLDGRWSVAAAGEEEEEL
        MDQ+KD SSFF+WEDSADSEVDKL  +P    ESAV   DDQEDA SCSC++        DFQD  DGD+  DGD  +G       R S A   EEEEE 
Subjt:  MDQMKDGSSFFVWEDSADSEVDKLPFYPRPGEESAV---DDQEDARSCSCDDAGERSRAVDFQD--DGDDADDGDHGVGGPDQLDGRWSVAAAGEEEEEL

Query:  EGESCN--VGVIRNMNEIVEDKVFWDTCMAGGYP
        E ES N  VG IRNMNE +EDKVFWDTCMAGGYP
Subjt:  EGESCN--VGVIRNMNEIVEDKVFWDTCMAGGYP

A0A2H5N748 Uncharacterized protein5.4e-0734.59Show/hide
Query:  DGSSFFVWEDSADSEVDKLPFYPRPGEE-SAVDDQEDARSCSCDDAGERSRAVDFQDDGDDADDGDHGVGGPDQLDGR----------WSVAAAGEEEEE
        D SSF + E+SADSEVD L       +   A  D++DA SCSCD    ++  +D+  D  + +  D G G       +          W+ AA  EEE  
Subjt:  DGSSFFVWEDSADSEVDKLPFYPRPGEE-SAVDDQEDARSCSCDDAGERSRAVDFQDDGDDADDGDHGVGGPDQLDGR----------WSVAAAGEEEEE

Query:  LEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP
              N  + R + + +ED++FW+TCMA GYP
Subjt:  LEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP

A0A5A7SSL9 Uncharacterized protein3.8e-2459.42Show/hide
Query:  MDQMKDGSSFFVWEDSADSEVDKLPFYPRPGEESAV--DDQEDARSCSC---DDAGERSRAVDFQDDGDDAD-DGDH-----GVGGPDQLDGRWSVAAAG
        MDQ+KD SSFF+WEDSADSEVDKL  +P    ESAV  DDQEDA SCSC   D + +  RA+DFQDDGD+ D D D      G GG  +           
Subjt:  MDQMKDGSSFFVWEDSADSEVDKLPFYPRPGEESAV--DDQEDARSCSC---DDAGERSRAVDFQDDGDDAD-DGDH-----GVGGPDQLDGRWSVAAAG

Query:  EEEEELEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP
        EEEEE E  S +VGVIRNMNE +EDK+FWDTCMAGGYP
Subjt:  EEEEELEGESCNVGVIRNMNEIVEDKVFWDTCMAGGYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAGATGAAAGATGGGTCTTCTTTCTTTGTGTGGGAAGACAGCGCAGATTCCGAGGTGGATAAATTACCGTTTTACCCTCGCCCGGGTGAGGAATCTGCTGTGGA
TGATCAGGAGGATGCTCGGTCCTGCAGCTGCGACGATGCGGGCGAGAGATCTAGAGCCGTTGATTTCCAAGATGATGGGGATGATGCCGACGATGGAGATCACGGCGTTG
GTGGGCCCGACCAGCTCGACGGAAGGTGGAGCGTGGCGGCGGCCGGCGAGGAGGAGGAAGAACTAGAAGGTGAGTCATGTAACGTGGGTGTGATCCGTAATATGAACGAA
ATAGTGGAAGACAAAGTCTTTTGGGACACTTGCATGGCGGGAGGGTATCCA
mRNA sequenceShow/hide mRNA sequence
ATGGACCAGATGAAAGATGGGTCTTCTTTCTTTGTGTGGGAAGACAGCGCAGATTCCGAGGTGGATAAATTACCGTTTTACCCTCGCCCGGGTGAGGAATCTGCTGTGGA
TGATCAGGAGGATGCTCGGTCCTGCAGCTGCGACGATGCGGGCGAGAGATCTAGAGCCGTTGATTTCCAAGATGATGGGGATGATGCCGACGATGGAGATCACGGCGTTG
GTGGGCCCGACCAGCTCGACGGAAGGTGGAGCGTGGCGGCGGCCGGCGAGGAGGAGGAAGAACTAGAAGGTGAGTCATGTAACGTGGGTGTGATCCGTAATATGAACGAA
ATAGTGGAAGACAAAGTCTTTTGGGACACTTGCATGGCGGGAGGGTATCCA
Protein sequenceShow/hide protein sequence
MDQMKDGSSFFVWEDSADSEVDKLPFYPRPGEESAVDDQEDARSCSCDDAGERSRAVDFQDDGDDADDGDHGVGGPDQLDGRWSVAAAGEEEEELEGESCNVGVIRNMNE
IVEDKVFWDTCMAGGYP