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MS001724 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001724
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold571:495594..496824
RNA-Seq ExpressionMS001724
SyntenyMS001724
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138621.1 uncharacterized protein LOC111009736 [Momordica charantia]1.0e-31100Show/hide
Query:  VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
        VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
Subjt:  VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
XP_022959449.1 uncharacterized protein LOC111460420 [Cucurbita moschata]4.4e-2788.73Show/hide
Query:  MKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
        MKFL WYVKIG VSALIGASMEMFMIKTGFYDKVTVLESEK+AWENSPEAQA+REALNPWRN DA  EA+K
Subjt:  MKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
XP_023006006.1 uncharacterized protein LOC111498883 [Cucurbita maxima]3.0e-2887.84Show/hide
Query:  SVQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
        SV+MKFL WYVKIG VSALIGASMEMFMIKTGFYDKVTVLESEK+AWENSPEAQA+REALNPWRN DA  EA+K
Subjt:  SVQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
XP_023548311.1 uncharacterized protein LOC111806987 [Cucurbita pepo subsp. pepo]8.8e-2887.67Show/hide
Query:  VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
        V+MKFL WYVKIG VSALIGASMEMFMIKTGFYDKVTVLESEK+AWENSPEAQA+REALNPWRN DA  EA+K
Subjt:  VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
XP_038906919.1 uncharacterized protein LOC120092786 [Benincasa hispida]1.5e-2791.55Show/hide
Query:  MKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
        MKFL WYVKIG VSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQA+REALNPWRN DA AEA+K
Subjt:  MKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
TrEMBL top hitse value%identityAlignment
A0A0A0K8V0 Uncharacterized protein1.5e-2583.1Show/hide
Query:  MKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
        MKFLDWYVKIG VSALIG SME+FMIK+GFYDKV V+ESE+LAWENSPEAQA+REALNPWRN DA  EA K
Subjt:  MKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
A0A5A7SQJ1 Uncharacterized protein3.6e-2783.56Show/hide
Query:  VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
        ++MKFL WYVKIG VSALIGASME+FMIKTGFYDKVTV+ESE+LAWENSPEAQA+REALNPWRN DA AEA++
Subjt:  VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
A0A6J1CA87 uncharacterized protein LOC1110097364.9e-32100Show/hide
Query:  VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
        VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
Subjt:  VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
A0A6J1H837 uncharacterized protein LOC1114604202.1e-2788.73Show/hide
Query:  MKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
        MKFL WYVKIG VSALIGASMEMFMIKTGFYDKVTVLESEK+AWENSPEAQA+REALNPWRN DA  EA+K
Subjt:  MKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
A0A6J1KWK7 uncharacterized protein LOC1114988831.5e-2887.84Show/hide
Query:  SVQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
        SV+MKFL WYVKIG VSALIGASMEMFMIKTGFYDKVTVLESEK+AWENSPEAQA+REALNPWRN DA  EA+K
Subjt:  SVQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G62450.1 unknown protein3.1e-2371.64Show/hide
Query:  VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDA
        ++ +FLDWY+KI   SA+IG  ME FMIKTGFYDKVTV+E+E+ A ENSPEAQA+REALNPWRN+DA
Subjt:  VQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAGTCCAAATGAAGTTTCTAGACTGGTATGTGAAGATTGGGGCAGTTTCGGCTTTGATTGGAGCTTCCATGGAGATGTTCATGATTAAGACGGGCTTCTATGATAAAGT
AACAGTTTTGGAATCAGAGAAGCTGGCTTGGGAGAATTCGCCCGAGGCTCAAGCAGTTAGAGAAGCCCTCAATCCTTGGAGAAATCGTGATGCTGTTGCAGAGGCCAAAA
AA
mRNA sequenceShow/hide mRNA sequence
TCAGTCCAAATGAAGTTTCTAGACTGGTATGTGAAGATTGGGGCAGTTTCGGCTTTGATTGGAGCTTCCATGGAGATGTTCATGATTAAGACGGGCTTCTATGATAAAGT
AACAGTTTTGGAATCAGAGAAGCTGGCTTGGGAGAATTCGCCCGAGGCTCAAGCAGTTAGAGAAGCCCTCAATCCTTGGAGAAATCGTGATGCTGTTGCAGAGGCCAAAA
AA
Protein sequenceShow/hide protein sequence
SVQMKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPWRNRDAVAEAKK