; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001725 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001725
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome locationscaffold571:497228..497581
RNA-Seq ExpressionMS001725
SyntenyMS001725
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
IPR018086 - NADH:ubiquinone oxidoreductase, subunit 1, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QDL00001.1 NdhA [Siraitia grosvenorii]4.2e-4888.14Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDTP+VQDINSFSRLEFLKEVYGILWVLVPILTTVLGITI VLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DGTKLLFKENL PSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

QJS52316.1 NADH-plastoquinone oxidoreductase subunit 1 [Indofevillea khasiana]8.4e-4988.98Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDTP+VQDINSFSRLEFLKEVYGILWVLVPILTTVLGITI VLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DGTKLLFKENLFPSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

YP_009456117.1 NADH dehydrogenase subunit 1 [Momordica charantia]2.9e-4989.83Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDTP+VQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DGTKLLFKENLFPSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

YP_009751534.1 NADH dehydrogenase subunit A [Thladiantha dubia]4.2e-4888.14Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDTP+VQDINSFSRLEFLKEVYGILWVLVPILTTVLGITI VLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DGTKLLFKENL PSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

YP_009752884.1 NADH dehydrogenase subunit A [Baijiania yunnanensis]4.2e-4888.14Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDTP+VQDINSFSRLEFLKEVYGILWVLVPILTTVLGITI VLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DGTKLLFKENL PSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

TrEMBL top hitse value%identityAlignment
A0A2I6C034 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.4e-4989.83Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDTP+VQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DGTKLLFKENLFPSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

A0A514YKY7 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.0e-4888.14Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDTP+VQDINSFSRLEFLKEVYGILWVLVPILTTVLGITI VLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DGTKLLFKENL PSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

A0A515BLM0 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.0e-4888.14Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDTP+VQDINSFSRLEFLKEVYGILWVLVPILTTVLGITI VLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DGTKLLFKENL PSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

A0A6C0U9F1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.0e-4888.14Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDTP+VQDINSFSRLEFLKEVYGILWVLVPILTTVLGITI VLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DGTKLLFKENL PSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

A0A6M4SS12 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic4.1e-4988.98Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDTP+VQDINSFSRLEFLKEVYGILWVLVPILTTVLGITI VLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DGTKLLFKENLFPSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

SwissProt top hitse value%identityAlignment
Q09WW3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.4e-4680.51Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MI  TP VQDINSFSR EFLKE YGI+W  +PI T VLGITI VLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DG KLLFKENLFPSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISILV   +  F
Subjt:  GPSIAVISILVDRQICKF

Q0ZIW3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic4.4e-4883.05Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDTP VQDINSFSRLE+LKEVYGI+W+LVPI T VLGITI VL IVWLE+EISA IQQRIGPEYAGPLG+LQAL DGTKLLFKENL PSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   I  F
Subjt:  GPSIAVISILVDRQICKF

Q1KXQ8 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic3.1e-4681.36Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDT  VQ INSFSRLE LKEVYGI+WVL+PI T VLGITI VLVIVWLE+EISA IQQRIGPEYAGPLG+LQAL DGTKLLFKENL PSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

Q2QD36 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic6.7e-4985.59Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDT +VQDI+SFSRLEFLKE YGILWVLVPILTTVLGITI VLVIVWLE+EISA IQQRIGPEYAGPLGVLQAL DGTKLLFKENL PSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

Q49KU3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.5e-4579.66Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MIIDT  VQD+NSFSRLE LKEVYGI+ + +PILT VLGITI VLVIVWLE+EISA IQQRIGPEYAGPLG+LQAL DGTKL+FKENLFPSRG TRLFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

Arabidopsis top hitse value%identityAlignment
AT2G07785.1 NADH dehydrogenase family protein8.5e-0739.68Show/hide
Query:  ARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSIGPSIAVISILVDRQICKF
        A +Q+R GP+  G  G+LQ L DG+KL+ KE + PS     LF + P    +  LV R +  F
Subjt:  ARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSIGPSIAVISILVDRQICKF

ATCG01100.1 NADH dehydrogenase family protein2.4e-4172.88Show/hide
Query:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI
        MII    VQ INSF +LE LKEVYG++W+ VPI + VLGI   VLVIVWLE+EISA IQQRIGPEYAGPLG+LQAL DGTKLLFKENL PSRG T LFSI
Subjt:  MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSI

Query:  GPSIAVISILVDRQICKF
        GPSIAVISIL+   +  F
Subjt:  GPSIAVISILVDRQICKF

ATMG00516.1 NADH dehydrogenase 1C7.0e-0935.48Show/hide
Query:  WVLVP--ILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSIGPSIAVISILVDRQICKF
        ++ VP  IL  +L + + V  +V  E+++ A +Q+R GP+  G  G+LQ L DG+KL+ KE + PS     LF + P    +  LV R +  F
Subjt:  WVLVP--ILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSIGPSIAVISILVDRQICKF

ATMG01120.1 NADH dehydrogenase 1B7.0e-0935.48Show/hide
Query:  WVLVP--ILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSIGPSIAVISILVDRQICKF
        ++ VP  IL  +L + + V  +V  E+++ A +Q+R GP+  G  G+LQ L DG+KL+ KE + PS     LF + P    +  LV R +  F
Subjt:  WVLVP--ILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSIGPSIAVISILVDRQICKF

ATMG01275.1 NADH dehydrogenase 1A7.0e-0935.48Show/hide
Query:  WVLVP--ILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSIGPSIAVISILVDRQICKF
        ++ VP  IL  +L + + V  +V  E+++ A +Q+R GP+  G  G+LQ L DG+KL+ KE + PS     LF + P    +  LV R +  F
Subjt:  WVLVP--ILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSIGPSIAVISILVDRQICKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATTGATACACCACGAGTACAAGATATCAATTCTTTTTCTAGATTGGAATTCTTAAAAGAAGTCTATGGAATTCTATGGGTGCTTGTTCCTATTTTGACTACTGT
ATTGGGAATCACAATAAGCGTACTAGTAATTGTATGGTTAGAAAAAGAAATATCCGCACGGATACAACAACGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTC
AAGCTTTAGTAGATGGTACAAAACTACTTTTTAAAGAAAATCTGTTTCCATCTAGAGGTGCTACTCGTTTATTCAGTATCGGACCATCCATAGCAGTCATATCAATTTTA
GTTGATAGACAAATTTGTAAATTT
mRNA sequenceShow/hide mRNA sequence
ATGATAATTGATACACCACGAGTACAAGATATCAATTCTTTTTCTAGATTGGAATTCTTAAAAGAAGTCTATGGAATTCTATGGGTGCTTGTTCCTATTTTGACTACTGT
ATTGGGAATCACAATAAGCGTACTAGTAATTGTATGGTTAGAAAAAGAAATATCCGCACGGATACAACAACGGATTGGACCTGAATATGCTGGTCCTTTGGGAGTTCTTC
AAGCTTTAGTAGATGGTACAAAACTACTTTTTAAAGAAAATCTGTTTCCATCTAGAGGTGCTACTCGTTTATTCAGTATCGGACCATCCATAGCAGTCATATCAATTTTA
GTTGATAGACAAATTTGTAAATTT
Protein sequenceShow/hide protein sequence
MIIDTPRVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITISVLVIVWLEKEISARIQQRIGPEYAGPLGVLQALVDGTKLLFKENLFPSRGATRLFSIGPSIAVISIL
VDRQICKF