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MS001737 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001737
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RALF-like 19
Genome locationscaffold571:580186..580527
RNA-Seq ExpressionMS001737
SyntenyMS001737
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015889777.1 protein RALF-like 19 [Ziziphus jujuba]1.3e-1747.46Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIG----RSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA
        M VK CLI LLLA AVV  ++ +  D   GL     D      +GD  GE +   +      R++    KY+SY+ALKKN +PCG RG SYY+C KR+RA
Subjt:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIG----RSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA

Query:  NPYRRSCLAIHGCARFTD
        NPY+R C  I  CARFTD
Subjt:  NPYRRSCLAIHGCARFTD

XP_022138431.1 protein RALF-like 19 [Momordica charantia]2.2e-3873.04Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAV-FSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
        MG K CLILLLLAAA VPH AG+I+DGI GLGRF+NDDA+ F+P G L GE+       R++L++GK+LSYAALKKNIIPCGGRGMSYYDC KR +ANPY
Subjt:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAV-FSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY

Query:  RRSCLAIHGCARFTD
        RRSCLAI GCARFTD
Subjt:  RRSCLAIHGCARFTD

XP_022138616.1 protein RALF-like 19 [Momordica charantia]1.3e-4177.19Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR
        MGVK CL+LLLLAAAVVP SA             H+++ VFSP GDLFGE SPRNL+GR +L+KGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR
Subjt:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR

Query:  RSCLAIHGCARFTD
        RSCLAIHGCARFTD
Subjt:  RSCLAIHGCARFTD

XP_022138617.1 protein RALF-like 19 [Momordica charantia]2.5e-4281.74Show/hide
Query:  MGVKFCLILLL-LAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
        MGVK CLILLL LAAAV  HSA              +DDAVFSP GDLFGETSPRNLIGRSML+KGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
Subjt:  MGVKFCLILLL-LAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY

Query:  RRSCLAIHGCARFTD
        RRSCLAIHGCARFTD
Subjt:  RRSCLAIHGCARFTD

XP_022138618.1 protein RALF-like 19 [Momordica charantia]6.0e-60100Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR
        MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR
Subjt:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR

Query:  RSCLAIHGCARFTD
        RSCLAIHGCARFTD
Subjt:  RSCLAIHGCARFTD

TrEMBL top hitse value%identityAlignment
A0A6J1C9P3 protein RALF-like 191.1e-3873.04Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAV-FSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
        MG K CLILLLLAAA VPH AG+I+DGI GLGRF+NDDA+ F+P G L GE+       R++L++GK+LSYAALKKNIIPCGGRGMSYYDC KR +ANPY
Subjt:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAV-FSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY

Query:  RRSCLAIHGCARFTD
        RRSCLAI GCARFTD
Subjt:  RRSCLAIHGCARFTD

A0A6J1CA84 protein RALF-like 196.1e-4277.19Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR
        MGVK CL+LLLLAAAVVP SA             H+++ VFSP GDLFGE SPRNL+GR +L+KGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR
Subjt:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR

Query:  RSCLAIHGCARFTD
        RSCLAIHGCARFTD
Subjt:  RSCLAIHGCARFTD

A0A6J1CBM3 protein RALF-like 191.2e-4281.74Show/hide
Query:  MGVKFCLILLL-LAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
        MGVK CLILLL LAAAV  HSA              +DDAVFSP GDLFGETSPRNLIGRSML+KGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
Subjt:  MGVKFCLILLL-LAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY

Query:  RRSCLAIHGCARFTD
        RRSCLAIHGCARFTD
Subjt:  RRSCLAIHGCARFTD

A0A6J1CDH9 protein RALF-like 192.9e-60100Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR
        MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR
Subjt:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYR

Query:  RSCLAIHGCARFTD
        RSCLAIHGCARFTD
Subjt:  RSCLAIHGCARFTD

A0A6P4A816 protein RALF-like 196.2e-1847.46Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIG----RSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA
        M VK CLI LLLA AVV  ++ +  D   GL     D      +GD  GE +   +      R++    KY+SY+ALKKN +PCG RG SYY+C KR+RA
Subjt:  MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIG----RSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA

Query:  NPYRRSCLAIHGCARFTD
        NPY+R C  I  CARFTD
Subjt:  NPYRRSCLAIHGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 193.6e-1545.3Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAG----YIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA
        MG+K  LIL LL  AVV  SA          ++G G    +D     + D   ET+ R L  R       Y+SY AL+KN +PC  RG SYYDC KRKRA
Subjt:  MGVKFCLILLLLAAAVVPHSAG----YIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA

Query:  NPYRRSCLAIHGCARFT
        NPYRR C  I  C R T
Subjt:  NPYRRSCLAIHGCARFT

Q8L9P8 Protein RALF-like 335.9e-1050.91Show/hide
Query:  IGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        I R +L   KY+SY AL++N +PC  RG SYY+C +  +ANPY R C AI  C R
Subjt:  IGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Q9FZA0 Protein RALF-like 48.9e-1443.1Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAG----YIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA
        MGVK  LI  LL  A+V  S           I+G G    DD + S +     ET+ R L      +  +Y+ Y ALKKN +PC  RG SYYDC KR+R 
Subjt:  MGVKFCLILLLLAAAVVPHSAG----YIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA

Query:  NPYRRSCLAIHGCARF
        NPYRR C AI  C R+
Subjt:  NPYRRSCLAIHGCARF

Q9LUS7 Rapid alkalinization factor 234.5e-1044.78Show/hide
Query:  GDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        G++  E    + I R +L   +Y+SY AL++N IPC  RG SYY+C +  +ANPY R C AI  C R
Subjt:  GDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Q9SRY3 Protein RALF-like 11.0e-0934.91Show/hide
Query:  ILLLLAAAVVPHSAGYIDD--GIHGLGRFHNDDAVFSPIGDLFG--ETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSC
        IL++   +  P  AG+ +D  G+       N       I +  G  E    + I R +L   KY+SY +LK+N +PC  RG SYY+C    +ANPY R C
Subjt:  ILLLLAAAVVPHSAGYIDD--GIHGLGRFHNDDAVFSPIGDLFG--ETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSC

Query:  LAIHGC
          I  C
Subjt:  LAIHGC

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 17.2e-1134.91Show/hide
Query:  ILLLLAAAVVPHSAGYIDD--GIHGLGRFHNDDAVFSPIGDLFG--ETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSC
        IL++   +  P  AG+ +D  G+       N       I +  G  E    + I R +L   KY+SY +LK+N +PC  RG SYY+C    +ANPY R C
Subjt:  ILLLLAAAVVPHSAGYIDD--GIHGLGRFHNDDAVFSPIGDLFG--ETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSC

Query:  LAIHGC
          I  C
Subjt:  LAIHGC

AT1G28270.1 ralf-like 46.3e-1543.1Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAG----YIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA
        MGVK  LI  LL  A+V  S           I+G G    DD + S +     ET+ R L      +  +Y+ Y ALKKN +PC  RG SYYDC KR+R 
Subjt:  MGVKFCLILLLLAAAVVPHSAG----YIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA

Query:  NPYRRSCLAIHGCARF
        NPYRR C AI  C R+
Subjt:  NPYRRSCLAIHGCARF

AT2G33775.1 ralf-like 192.6e-1645.3Show/hide
Query:  MGVKFCLILLLLAAAVVPHSAG----YIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA
        MG+K  LIL LL  AVV  SA          ++G G    +D     + D   ET+ R L  R       Y+SY AL+KN +PC  RG SYYDC KRKRA
Subjt:  MGVKFCLILLLLAAAVVPHSAG----YIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA

Query:  NPYRRSCLAIHGCARFT
        NPYRR C  I  C R T
Subjt:  NPYRRSCLAIHGCARFT

AT3G16570.1 rapid alkalinization factor 233.2e-1144.78Show/hide
Query:  GDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        G++  E    + I R +L   +Y+SY AL++N IPC  RG SYY+C +  +ANPY R C AI  C R
Subjt:  GDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

AT4G15800.1 ralf-like 334.2e-1150.91Show/hide
Query:  IGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        I R +L   KY+SY AL++N +PC  RG SYY+C +  +ANPY R C AI  C R
Subjt:  IGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGTGAAGTTCTGCCTCATTCTCCTCCTCCTCGCCGCCGCGGTGGTGCCTCACTCCGCCGGCTACATCGACGACGGCATCCACGGCCTGGGGAGGTTCCACAATGA
CGACGCCGTTTTCTCCCCCATCGGCGACTTGTTCGGAGAAACGAGCCCGCGAAATCTGATCGGCCGTAGTATGCTTAAGAAGGGGAAGTATCTGAGCTACGCGGCGCTGA
AGAAGAACATCATCCCTTGCGGCGGCAGGGGAATGTCTTATTACGATTGCACCAAGCGCAAGAGAGCCAATCCTTACAGGCGCTCATGCCTCGCCATCCATGGCTGCGCT
CGATTCACCGAT
mRNA sequenceShow/hide mRNA sequence
ATGGGGGTGAAGTTCTGCCTCATTCTCCTCCTCCTCGCCGCCGCGGTGGTGCCTCACTCCGCCGGCTACATCGACGACGGCATCCACGGCCTGGGGAGGTTCCACAATGA
CGACGCCGTTTTCTCCCCCATCGGCGACTTGTTCGGAGAAACGAGCCCGCGAAATCTGATCGGCCGTAGTATGCTTAAGAAGGGGAAGTATCTGAGCTACGCGGCGCTGA
AGAAGAACATCATCCCTTGCGGCGGCAGGGGAATGTCTTATTACGATTGCACCAAGCGCAAGAGAGCCAATCCTTACAGGCGCTCATGCCTCGCCATCCATGGCTGCGCT
CGATTCACCGAT
Protein sequenceShow/hide protein sequence
MGVKFCLILLLLAAAVVPHSAGYIDDGIHGLGRFHNDDAVFSPIGDLFGETSPRNLIGRSMLKKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCA
RFTD