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MS001738 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001738
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RALF-like 19
Genome locationscaffold571:582711..583034
RNA-Seq ExpressionMS001738
SyntenyMS001738
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138431.1 protein RALF-like 19 [Momordica charantia]9.4e-5599.07Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGESRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAI
        MGAKLCLILLLL+AAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGESRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAI
Subjt:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGESRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAI

Query:  TGCARFTD
        TGCARFTD
Subjt:  TGCARFTD

XP_022138616.1 protein RALF-like 19 [Momordica charantia]8.9e-2962.61Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGE-------SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY
        MG KLCL+LLLL+AA VP  A   N+             + F+PGG L GE        R+LLQ+GK+LSYAALKKNIIPCGGRGMSYYDC KR +ANPY
Subjt:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGE-------SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY

Query:  RRSCLAITGCARFTD
        RRSCLAI GCARFTD
Subjt:  RRSCLAITGCARFTD

XP_022138617.1 protein RALF-like 19 [Momordica charantia]4.9e-2761.74Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGES-------RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY
        MG KLCLILLL+ AAAV   +  +           +DDA+ F+P G L GE+       R++LQ+GK+LSYAALKKNIIPCGGRGMSYYDC KR +ANPY
Subjt:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGES-------RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY

Query:  RRSCLAITGCARFTD
        RRSCLAI GCARFTD
Subjt:  RRSCLAITGCARFTD

XP_022138618.1 protein RALF-like 19 [Momordica charantia]6.1e-3872.17Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGES-------RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY
        MG K CLILLLL+AA VPH AG+I+DGI GLGRF+NDDA+ F+P G L GE+       R++L++GK+LSYAALKKNIIPCGGRGMSYYDC KR +ANPY
Subjt:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGES-------RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY

Query:  RRSCLAITGCARFTD
        RRSCLAI GCARFTD
Subjt:  RRSCLAITGCARFTD

XP_022927735.1 protein RALF-like 4 [Cucurbita moschata]3.0e-1646.61Show/hide
Query:  KLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPG----GILAGESRNLLQRG---------KFLSYAALKKNIIPCGGRGMSYYDCAKRMKA
        KLCL LLL+ A   P F+   ++   G   F      +F  G     I     R L Q G         +FL+Y AL KN IPCG RG SYYDC KR + 
Subjt:  KLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPG----GILAGESRNLLQRG---------KFLSYAALKKNIIPCGGRGMSYYDCAKRMKA

Query:  NPYRRSCLAITGCARFTD
        NPYRR C AITGCARFTD
Subjt:  NPYRRSCLAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A6J1C9P3 protein RALF-like 194.6e-5599.07Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGESRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAI
        MGAKLCLILLLL+AAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGESRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAI
Subjt:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGESRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAI

Query:  TGCARFTD
        TGCARFTD
Subjt:  TGCARFTD

A0A6J1CA84 protein RALF-like 194.3e-2962.61Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGE-------SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY
        MG KLCL+LLLL+AA VP  A   N+             + F+PGG L GE        R+LLQ+GK+LSYAALKKNIIPCGGRGMSYYDC KR +ANPY
Subjt:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGE-------SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY

Query:  RRSCLAITGCARFTD
        RRSCLAI GCARFTD
Subjt:  RRSCLAITGCARFTD

A0A6J1CBM3 protein RALF-like 192.4e-2761.74Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGES-------RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY
        MG KLCLILLL+ AAAV   +  +           +DDA+ F+P G L GE+       R++LQ+GK+LSYAALKKNIIPCGGRGMSYYDC KR +ANPY
Subjt:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGES-------RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY

Query:  RRSCLAITGCARFTD
        RRSCLAI GCARFTD
Subjt:  RRSCLAITGCARFTD

A0A6J1CDH9 protein RALF-like 193.0e-3872.17Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGES-------RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY
        MG K CLILLLL+AA VPH AG+I+DGI GLGRF+NDDA+ F+P G L GE+       R++L++GK+LSYAALKKNIIPCGGRGMSYYDC KR +ANPY
Subjt:  MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGES-------RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPY

Query:  RRSCLAITGCARFTD
        RRSCLAI GCARFTD
Subjt:  RRSCLAITGCARFTD

A0A6J1EPT5 protein RALF-like 41.4e-1646.61Show/hide
Query:  KLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPG----GILAGESRNLLQRG---------KFLSYAALKKNIIPCGGRGMSYYDCAKRMKA
        KLCL LLL+ A   P F+   ++   G   F      +F  G     I     R L Q G         +FL+Y AL KN IPCG RG SYYDC KR + 
Subjt:  KLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPG----GILAGESRNLLQRG---------KFLSYAALKKNIIPCGGRGMSYYDCAKRMKA

Query:  NPYRRSCLAITGCARFTD
        NPYRR C AITGCARFTD
Subjt:  NPYRRSCLAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 194.9e-1441.59Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAG----FINDGIPGLGRFYNDDAINFAPGGILAGES--RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYR
        MG K+ LIL LL+ A V   A          + G G    D  +++    ++  E+  R L  R  ++SY AL+KN +PC  RG SYYDC KR +ANPYR
Subjt:  MGAKLCLILLLLSAAAVPHFAG----FINDGIPGLGRFYNDDAINFAPGGILAGES--RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYR

Query:  RSCLAITGCARFT
        R C  IT C R T
Subjt:  RSCLAITGCARFT

Q8L9P8 Protein RALF-like 332.5e-1050Show/hide
Query:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR
        +R +L   K++SY AL++N +PC  RG SYY+C +  +ANPY R C AIT C R
Subjt:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR

Q9FZA0 Protein RALF-like 42.7e-1241.96Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAG----FINDGIPGLGRFYNDDAINFAPGGILAGE-SRNLLQRG-KFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYR
        MG K+ LI  LL  A V              I G G    DD +      ++  E +R  L RG +++ Y ALKKN +PC  RG SYYDC KR + NPYR
Subjt:  MGAKLCLILLLLSAAAVPHFAG----FINDGIPGLGRFYNDDAINFAPGGILAGE-SRNLLQRG-KFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYR

Query:  RSCLAITGCARF
        R C AIT C R+
Subjt:  RSCLAITGCARF

Q9LUS7 Rapid alkalinization factor 234.3e-1050Show/hide
Query:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR
        +R +L   +++SY AL++N IPC  RG SYY+C +  +ANPY R C AIT C R
Subjt:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR

Q9MA62 Protein RALF-like 224.3e-1048.15Show/hide
Query:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR
        SR +L + K++SY A+++N +PC  RG SYY+C +  +ANPY R C  IT C R
Subjt:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 41.9e-1341.96Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAG----FINDGIPGLGRFYNDDAINFAPGGILAGE-SRNLLQRG-KFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYR
        MG K+ LI  LL  A V              I G G    DD +      ++  E +R  L RG +++ Y ALKKN +PC  RG SYYDC KR + NPYR
Subjt:  MGAKLCLILLLLSAAAVPHFAG----FINDGIPGLGRFYNDDAINFAPGGILAGE-SRNLLQRG-KFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYR

Query:  RSCLAITGCARF
        R C AIT C R+
Subjt:  RSCLAITGCARF

AT2G33775.1 ralf-like 193.5e-1541.59Show/hide
Query:  MGAKLCLILLLLSAAAVPHFAG----FINDGIPGLGRFYNDDAINFAPGGILAGES--RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYR
        MG K+ LIL LL+ A V   A          + G G    D  +++    ++  E+  R L  R  ++SY AL+KN +PC  RG SYYDC KR +ANPYR
Subjt:  MGAKLCLILLLLSAAAVPHFAG----FINDGIPGLGRFYNDDAINFAPGGILAGES--RNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYR

Query:  RSCLAITGCARFT
        R C  IT C R T
Subjt:  RSCLAITGCARFT

AT3G05490.1 ralf-like 223.1e-1148.15Show/hide
Query:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR
        SR +L + K++SY A+++N +PC  RG SYY+C +  +ANPY R C  IT C R
Subjt:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR

AT3G16570.1 rapid alkalinization factor 233.1e-1150Show/hide
Query:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR
        +R +L   +++SY AL++N IPC  RG SYY+C +  +ANPY R C AIT C R
Subjt:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR

AT4G15800.1 ralf-like 331.8e-1150Show/hide
Query:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR
        +R +L   K++SY AL++N +PC  RG SYY+C +  +ANPY R C AIT C R
Subjt:  SRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCGAAGCTCTGCCTGATTCTCCTCCTCCTTTCGGCGGCGGCGGTGCCCCACTTCGCCGGCTTCATCAACGACGGGATCCCCGGGCTGGGGCGGTTCTACAACGA
CGACGCCATTAATTTCGCCCCCGGCGGCATCTTGGCCGGAGAATCGCGAAACTTGCTTCAAAGGGGCAAATTTCTGAGCTACGCGGCGCTGAAGAAGAACATAATCCCCT
GCGGCGGCAGGGGCATGTCTTACTACGATTGCGCCAAGCGCATGAAAGCCAATCCTTACAGGCGCTCCTGCCTCGCCATCACTGGCTGCGCTCGATTCACCGAT
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCGAAGCTCTGCCTGATTCTCCTCCTCCTTTCGGCGGCGGCGGTGCCCCACTTCGCCGGCTTCATCAACGACGGGATCCCCGGGCTGGGGCGGTTCTACAACGA
CGACGCCATTAATTTCGCCCCCGGCGGCATCTTGGCCGGAGAATCGCGAAACTTGCTTCAAAGGGGCAAATTTCTGAGCTACGCGGCGCTGAAGAAGAACATAATCCCCT
GCGGCGGCAGGGGCATGTCTTACTACGATTGCGCCAAGCGCATGAAAGCCAATCCTTACAGGCGCTCCTGCCTCGCCATCACTGGCTGCGCTCGATTCACCGAT
Protein sequenceShow/hide protein sequence
MGAKLCLILLLLSAAAVPHFAGFINDGIPGLGRFYNDDAINFAPGGILAGESRNLLQRGKFLSYAALKKNIIPCGGRGMSYYDCAKRMKANPYRRSCLAITGCARFTD