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MS001739 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001739
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RALF-like 19
Genome locationscaffold571:586604..586915
RNA-Seq ExpressionMS001739
SyntenyMS001739
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138431.1 protein RALF-like 19 [Momordica charantia]4.7e-2763.79Show/hide
Query:  MGVKLCLILLLILAAAVAPHSATL------------SDDAV-FSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANP
        MG KLCLILLL+ AAAV PH A              +DDA+ F+P G L GE+       R++LQ+GK+LSYAALKKNIIPCGGRGMSYYDC KR +ANP
Subjt:  MGVKLCLILLLILAAAVAPHSATL------------SDDAV-FSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANP

Query:  YRRSCLAIHGCARFTD
        YRRSCLAI GCARFTD
Subjt:  YRRSCLAIHGCARFTD

XP_022138616.1 protein RALF-like 19 [Momordica charantia]2.3e-4286.41Show/hide
Query:  MGVKLCLILLLILAAAVAPHSATLSDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        MGVKLCL+LLL LAAAV P SA+ S++ VFSP GDLFGE SPRNL+GR +LQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
Subjt:  MGVKLCLILLLILAAAVAPHSATLSDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Query:  FTD
        FTD
Subjt:  FTD

XP_022138617.1 protein RALF-like 19 [Momordica charantia]5.2e-5099.03Show/hide
Query:  MGVKLCLILLLILAAAVAPHSATLSDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        MGVKLCLILLLILAAAVA HSATLSDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
Subjt:  MGVKLCLILLLILAAAVAPHSATLSDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Query:  FTD
        FTD
Subjt:  FTD

XP_022138618.1 protein RALF-like 19 [Momordica charantia]1.0e-4282.61Show/hide
Query:  MGVKLCLILLLILAAAVAPHSATL------------SDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
        MGVK CLILLL LAAAV PHSA              +DDAVFSP GDLFGETSPRNLIGRSML+KGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
Subjt:  MGVKLCLILLLILAAAVAPHSATL------------SDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY

Query:  RRSCLAIHGCARFTD
        RRSCLAIHGCARFTD
Subjt:  RRSCLAIHGCARFTD

XP_023530159.1 protein RALF-like 19 [Cucurbita pepo subsp. pepo]3.7e-1646.61Show/hide
Query:  VKLCLILLLILAAAVAP---------HSATLSDDAVFS----PTGDLFGETSPRNL----IGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA
        +K+CL+LLL+  A VAP         HS++L D++ +S     + +   E S R L       +   + + LSY AL KN IPCG RG SYYDC KR+R 
Subjt:  VKLCLILLLILAAAVAP---------HSATLSDDAVFS----PTGDLFGETSPRNL----IGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRA

Query:  NPYRRSCLAIHGCARFTD
        NPYRR C AI GCARFTD
Subjt:  NPYRRSCLAIHGCARFTD

TrEMBL top hitse value%identityAlignment
A0A0A0KHU4 Uncharacterized protein3.1e-1655.05Show/hide
Query:  KLCLILLLILAAAVAPHSATLSDDAVFS----PTGDL--FGETSPRNLIGRSM---LQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLA
        KLCL LLLI A   AP    LSDD   S    P  D     E S R L          K KYL Y AL+KN IPC  RG SYYDC KRK+ANPYRR C+A
Subjt:  KLCLILLLILAAAVAPHSATLSDDAVFS----PTGDL--FGETSPRNLIGRSM---LQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLA

Query:  IHGCARFTD
        I GCARFTD
Subjt:  IHGCARFTD

A0A6J1C9P3 protein RALF-like 192.3e-2763.79Show/hide
Query:  MGVKLCLILLLILAAAVAPHSATL------------SDDAV-FSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANP
        MG KLCLILLL+ AAAV PH A              +DDA+ F+P G L GE+       R++LQ+GK+LSYAALKKNIIPCGGRGMSYYDC KR +ANP
Subjt:  MGVKLCLILLLILAAAVAPHSATL------------SDDAV-FSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANP

Query:  YRRSCLAIHGCARFTD
        YRRSCLAI GCARFTD
Subjt:  YRRSCLAIHGCARFTD

A0A6J1CA84 protein RALF-like 191.1e-4286.41Show/hide
Query:  MGVKLCLILLLILAAAVAPHSATLSDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        MGVKLCL+LLL LAAAV P SA+ S++ VFSP GDLFGE SPRNL+GR +LQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
Subjt:  MGVKLCLILLLILAAAVAPHSATLSDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Query:  FTD
        FTD
Subjt:  FTD

A0A6J1CBM3 protein RALF-like 192.5e-5099.03Show/hide
Query:  MGVKLCLILLLILAAAVAPHSATLSDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        MGVKLCLILLLILAAAVA HSATLSDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
Subjt:  MGVKLCLILLLILAAAVAPHSATLSDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Query:  FTD
        FTD
Subjt:  FTD

A0A6J1CDH9 protein RALF-like 195.0e-4382.61Show/hide
Query:  MGVKLCLILLLILAAAVAPHSATL------------SDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
        MGVK CLILLL LAAAV PHSA              +DDAVFSP GDLFGETSPRNLIGRSML+KGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
Subjt:  MGVKLCLILLLILAAAVAPHSATL------------SDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY

Query:  RRSCLAIHGCARFTD
        RRSCLAIHGCARFTD
Subjt:  RRSCLAIHGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 191.8e-1342.11Show/hide
Query:  MGVKLCLILLLILAAAVAPHS--------ATLSDDAVFSPTGDL----FGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
        MG+K+ LIL L+  A VA  +        + ++        G+L      ET+ R L  R       Y+SY AL+KN +PC  RG SYYDC KRKRANPY
Subjt:  MGVKLCLILLLILAAAVAPHS--------ATLSDDAVFSPTGDL----FGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY

Query:  RRSCLAIHGCARFT
        RR C  I  C R T
Subjt:  RRSCLAIHGCARFT

Q8L9P8 Protein RALF-like 334.1e-1050.91Show/hide
Query:  IGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        I R +L   KY+SY AL++N +PC  RG SYY+C +  +ANPY R C AI  C R
Subjt:  IGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Q9FZA0 Protein RALF-like 43.4e-1243.52Show/hide
Query:  MGVKLCLIL-LLILAAAVAPHSATLS-DDAVFSPTGDLFGETSPRNLI----GRSMLQKG-KYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCL
        MGVK+ LI  LLILA      +AT     +  +  G +  +    +L+     R  L +G +Y+ Y ALKKN +PC  RG SYYDC KR+R NPYRR C 
Subjt:  MGVKLCLIL-LLILAAAVAPHSATLS-DDAVFSPTGDLFGETSPRNLI----GRSMLQKG-KYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCL

Query:  AIHGCARF
        AI  C R+
Subjt:  AIHGCARF

Q9LUS7 Rapid alkalinization factor 238.4e-1143.21Show/hide
Query:  SATLSDDA-VFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        SA L D   +F   G++  E    + I R +L   +Y+SY AL++N IPC  RG SYY+C +  +ANPY R C AI  C R
Subjt:  SATLSDDA-VFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Q9MA62 Protein RALF-like 221.6e-0947.27Show/hide
Query:  IGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        I R +L + KY+SY A+++N +PC  RG SYY+C +  +ANPY R C  I  C R
Subjt:  IGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 42.4e-1343.52Show/hide
Query:  MGVKLCLIL-LLILAAAVAPHSATLS-DDAVFSPTGDLFGETSPRNLI----GRSMLQKG-KYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCL
        MGVK+ LI  LLILA      +AT     +  +  G +  +    +L+     R  L +G +Y+ Y ALKKN +PC  RG SYYDC KR+R NPYRR C 
Subjt:  MGVKLCLIL-LLILAAAVAPHSATLS-DDAVFSPTGDLFGETSPRNLI----GRSMLQKG-KYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCL

Query:  AIHGCARF
        AI  C R+
Subjt:  AIHGCARF

AT2G33775.1 ralf-like 191.3e-1442.11Show/hide
Query:  MGVKLCLILLLILAAAVAPHS--------ATLSDDAVFSPTGDL----FGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY
        MG+K+ LIL L+  A VA  +        + ++        G+L      ET+ R L  R       Y+SY AL+KN +PC  RG SYYDC KRKRANPY
Subjt:  MGVKLCLILLLILAAAVAPHS--------ATLSDDAVFSPTGDL----FGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPY

Query:  RRSCLAIHGCARFT
        RR C  I  C R T
Subjt:  RRSCLAIHGCARFT

AT3G05490.1 ralf-like 221.1e-1047.27Show/hide
Query:  IGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        I R +L + KY+SY A+++N +PC  RG SYY+C +  +ANPY R C  I  C R
Subjt:  IGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

AT3G16570.1 rapid alkalinization factor 235.9e-1243.21Show/hide
Query:  SATLSDDA-VFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        SA L D   +F   G++  E    + I R +L   +Y+SY AL++N IPC  RG SYY+C +  +ANPY R C AI  C R
Subjt:  SATLSDDA-VFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR

AT4G15800.1 ralf-like 332.9e-1150.91Show/hide
Query:  IGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR
        I R +L   KY+SY AL++N +PC  RG SYY+C +  +ANPY R C AI  C R
Subjt:  IGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACATGGGGGTGAAGCTCTGCCTGATTCTCCTCCTCATCCTCGCCGCGGCGGTGGCACCTCACTCCGCAACCCTCAGCGACGACGCCGTTTTCTCCCCCACCGGCGACCT
TTTCGGAGAAACCAGCCCGCGAAATCTGATCGGCCGTAGTATGCTTCAGAAGGGGAAGTATCTGAGCTACGCGGCGCTGAAGAAGAACATCATCCCCTGCGGCGGCAGGG
GAATGTCTTATTACGACTGCACCAAGCGCAAGAGAGCCAATCCTTACAGGCGTTCATGCCTCGCCATCCATGGCTGCGCTCGATTCACCGAT
mRNA sequenceShow/hide mRNA sequence
AACATGGGGGTGAAGCTCTGCCTGATTCTCCTCCTCATCCTCGCCGCGGCGGTGGCACCTCACTCCGCAACCCTCAGCGACGACGCCGTTTTCTCCCCCACCGGCGACCT
TTTCGGAGAAACCAGCCCGCGAAATCTGATCGGCCGTAGTATGCTTCAGAAGGGGAAGTATCTGAGCTACGCGGCGCTGAAGAAGAACATCATCCCCTGCGGCGGCAGGG
GAATGTCTTATTACGACTGCACCAAGCGCAAGAGAGCCAATCCTTACAGGCGTTCATGCCTCGCCATCCATGGCTGCGCTCGATTCACCGAT
Protein sequenceShow/hide protein sequence
NMGVKLCLILLLILAAAVAPHSATLSDDAVFSPTGDLFGETSPRNLIGRSMLQKGKYLSYAALKKNIIPCGGRGMSYYDCTKRKRANPYRRSCLAIHGCARFTD