; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001746 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001746
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase Topors
Genome locationscaffold571:622440..623832
RNA-Seq ExpressionMS001746
SyntenyMS001746
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006513 - protein monoubiquitination (biological process)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593954.1 E3 ubiquitin-protein ligase Topors, partial [Cucurbita argyrosperma subsp. sororia]2.0e-11478.57Show/hide
Query:  EIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLN
        +IM  +TREP RKL  EN V KVISPAICGETCPICLREL+D TAAVLT+CIHAYCV CIRKWS LKRTCPLCNAQF+SWFSKI  SS SFRKE LP LN
Subjt:  EIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLN

Query:  CVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEK
        C D L  G+GSSR D+RR+LQ  RNEL+R RRSE PLTWRRSFGRRG E VP DVIA RKLQWRASIY+R IQA PSSVR    +N++GSHG KEAILE+
Subjt:  CVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEK

Query:  IKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
        IKPWIQREL+AIL DPDPTIIVHLVTSLFV+RLEAPSSQLN E+DFL  L PFLYEKTDLFWHELR
Subjt:  IKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR

XP_022138780.1 E3 ubiquitin-protein ligase Topors [Momordica charantia]1.8e-14798.86Show/hide
Query:  MKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLNCV
        MKPATREPRRKLNREN VSKVISPAICGETCPICLRELQDCT AVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLNCV
Subjt:  MKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLNCV

Query:  DKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEKIK
        DKLN GVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEKIK
Subjt:  DKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEKIK

Query:  PWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
        PWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
Subjt:  PWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR

XP_022999966.1 E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita maxima]1.9e-11578.07Show/hide
Query:  VQEEIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLP
        ++ +IMK +T EP RKLN EN V KVISPAICG+TCPICLREL+D TAAVLT+CIHAYCV CIRKWS LKRTCPLCNAQF+SWF KIN SS SFRKE LP
Subjt:  VQEEIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLP

Query:  TLNCVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAI
         LNC D L  G+GSSR D+RR+LQ  RNEL+R RRSE PLTWRRSFGRRG E VP DVIA RKLQWRASIY+R IQAVPSSVR    +N++GSHG KEAI
Subjt:  TLNCVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAI

Query:  LEKIKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
        LE+IKPWIQREL+AIL DPDPTIIVHLVTSLFV+RLEAPSSQLN E+DFL  L PFLYEKTDLFWHELR
Subjt:  LEKIKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR

XP_038875512.1 E3 ubiquitin-protein ligase Topors isoform X1 [Benincasa hispida]9.2e-11578.44Show/hide
Query:  VQEEIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLP
        +Q E+MKP+TREP  KLN EN +SKVISPAICGETCPICL EL+D TAAVLT+CIHAYC+ CIRKWS LKRTCPLCNAQF+SWF+KIN SS SFR E L 
Subjt:  VQEEIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLP

Query:  TLNCVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAI
        TLNC DKL  GVGSSR D+R +LQ  RNELNR RRSE  LTWRRSFGRRG E VPADV+A R+LQWRASIYNR IQA+PSSVR   ELNI GS GAKEAI
Subjt:  TLNCVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAI

Query:  LEKIKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
        LE+IKPWI+RELQAILEDPDPTIIVHLV SLFV+RLE PS QLN EDDFL  L PFL+EKTDLFWHELR
Subjt:  LEKIKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR

XP_038875513.1 E3 ubiquitin-protein ligase Topors isoform X2 [Benincasa hispida]9.2e-11578.44Show/hide
Query:  VQEEIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLP
        +Q E+MKP+TREP  KLN EN +SKVISPAICGETCPICL EL+D TAAVLT+CIHAYC+ CIRKWS LKRTCPLCNAQF+SWF+KIN SS SFR E L 
Subjt:  VQEEIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLP

Query:  TLNCVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAI
        TLNC DKL  GVGSSR D+R +LQ  RNELNR RRSE  LTWRRSFGRRG E VPADV+A R+LQWRASIYNR IQA+PSSVR   ELNI GS GAKEAI
Subjt:  TLNCVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAI

Query:  LEKIKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
        LE+IKPWI+RELQAILEDPDPTIIVHLV SLFV+RLE PS QLN EDDFL  L PFL+EKTDLFWHELR
Subjt:  LEKIKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR

TrEMBL top hitse value%identityAlignment
A0A0A0KCD1 RING-type domain-containing protein1.0e-11175.28Show/hide
Query:  VQEEIMK--PATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEH
        ++ E+MK   +TREP RKLN EN ++KVISPAICGETCPICLREL+D TAAVLT+CIHAYC+ CIRKWS LKRTCPLCNAQF+SWF+KIN SS SFRKE 
Subjt:  VQEEIMK--PATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEH

Query:  LPTLNCVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKE
        L T NC DKL  GVGSS+ID+R +LQ  R ELNR RRSE  LTWRRSFGRRG + +PADV+ +RK QWRASIYNR IQAVPSSVR   ELN+ GS G KE
Subjt:  LPTLNCVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKE

Query:  AILEKIKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
         ILE+IKPWIQRELQ ILEDPDPTIIVHLV SLFV+R+EA SSQLN EDDFL  L PFL+EKTDLFWHELR
Subjt:  AILEKIKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR

A0A1S3C7X8 E3 ubiquitin-protein ligase Topors5.1e-11176.69Show/hide
Query:  MKP--ATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLN
        MKP  +TREP RKLN EN ++KVISPAICGETCPICLREL+D TAAVLT+CIHAYC+ CIRKWS LKRTCPLCNAQF+SWF+KIN SS SFRKE L T N
Subjt:  MKP--ATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLN

Query:  CVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEK
        C +KL  GVGSS+ D+R +LQ  R ELNR RRSE  LTWRRSFGRRG + +PADV+ +RKLQWRASIYNR IQAVPSSVR   ELNI G+ G KE ILE+
Subjt:  CVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEK

Query:  IKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
        IKPWIQRELQ ILEDPDPTIIVHLV SLFV+RLEA SSQLN EDDFL  L PFL+EKTDLFWHELR
Subjt:  IKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR

A0A6J1CAG7 E3 ubiquitin-protein ligase Topors8.9e-14898.86Show/hide
Query:  MKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLNCV
        MKPATREPRRKLNREN VSKVISPAICGETCPICLRELQDCT AVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLNCV
Subjt:  MKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLNCV

Query:  DKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEKIK
        DKLN GVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEKIK
Subjt:  DKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEKIK

Query:  PWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
        PWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
Subjt:  PWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR

A0A6J1EQ79 E3 ubiquitin-protein ligase Topors isoform X11.7e-11478.57Show/hide
Query:  EIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLN
        +I K +T EP RKLN EN V KVISPAICGETCPICLREL+D  AAVLT+CIHAYCV CIRKWS LKRTCPLCNAQF+SWFSKI  SS SFRKE LP LN
Subjt:  EIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLN

Query:  CVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEK
        C D L  G+GSSR D+RR+LQ  RNEL+R RRSE PLTWRRSFGRRG E VP DVIA RKLQWRASIY+R IQAVPSSVR    +N++GSHG KEAILE+
Subjt:  CVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEK

Query:  IKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
        IKPWIQREL+AIL DPDPTIIVHLVTSLFV+RLEAPSSQLN E+DFL  L PFLYEKTDLFWHELR
Subjt:  IKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR

A0A6J1KEK6 E3 ubiquitin-protein ligase Topors isoform X19.0e-11678.07Show/hide
Query:  VQEEIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLP
        ++ +IMK +T EP RKLN EN V KVISPAICG+TCPICLREL+D TAAVLT+CIHAYCV CIRKWS LKRTCPLCNAQF+SWF KIN SS SFRKE LP
Subjt:  VQEEIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLP

Query:  TLNCVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAI
         LNC D L  G+GSSR D+RR+LQ  RNEL+R RRSE PLTWRRSFGRRG E VP DVIA RKLQWRASIY+R IQAVPSSVR    +N++GSHG KEAI
Subjt:  TLNCVDKLNAGVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAI

Query:  LEKIKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR
        LE+IKPWIQREL+AIL DPDPTIIVHLVTSLFV+RLEAPSSQLN E+DFL  L PFLYEKTDLFWHELR
Subjt:  LEKIKPWIQRELQAILEDPDPTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELR

SwissProt top hitse value%identityAlignment
P08393 E3 ubiquitin-protein ligase ICP08.1e-0536.17Show/hide
Query:  GETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQ
        G+ C +C  E+          C+H +C+ C++ W  L+ TCPLCNA+
Subjt:  GETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQ

P28284 E3 ubiquitin-protein ligase ICP04.0e-0435.56Show/hide
Query:  GETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCN
        G+ C +C  E+          C+H +C+ C++ W  L+ TCPLCN
Subjt:  GETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCN

P29129 E3 ubiquitin-protein ligase ICP02.4e-0436.84Show/hide
Query:  CPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSS
        CPICL      T A    C+H +C++CI++W+     CPLCNA+  S    ++  +S
Subjt:  CPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSS

Q7ZWF4 RING finger protein 1454.0e-0440.82Show/hide
Query:  ETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFES
        + C IC    QD  +AV+T C H +   C++KW  ++ TCPLC+ Q +S
Subjt:  ETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFES

Q9P1Y6 PHD and RING finger domain-containing protein 14.0e-0431.75Show/hide
Query:  ETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRK
        E+CPICL   +D       +C H +C++CI +WS    +CP+    F+    +  F     RK
Subjt:  ETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRK

Arabidopsis top hitse value%identityAlignment
AT2G28920.1 RING/U-box superfamily protein1.1e-0440.38Show/hide
Query:  ETCPICLRELQ-DCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWF
        + C ICL + + +    VL  C H + V+CI  W   K TCP+C A F+ WF
Subjt:  ETCPICLRELQ-DCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWF

AT2G39100.1 RING/U-box superfamily protein8.4e-5847.01Show/hide
Query:  KVISPAICGETCPICLRELQD-CTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLNCVDKLNAGVGSSRIDSRRLL
        + I PA+ G++CPICL  L +  +AAV+T C H YC+ CIRKWS+ KR CPLCN +F+SWF   +F+S  + KE LP L   + L     ++  D RR++
Subjt:  KVISPAICGETCPICLRELQD-CTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLNCVDKLNAGVGSSRIDSRRLL

Query:  QRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEKIKPWIQRELQAILEDPDPTI
        QR+R+ L        PL WRRSFGR GS  VP  VI QRKLQWRASIY + ++AV    R   EL+++ +   K  I E+I+PWI+RELQA+L DPDP++
Subjt:  QRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEKIKPWIQRELQAILEDPDPTI

Query:  IVHLVTSLFVSRLEAPSSQLNPE-----DDFLLALHPFLYEKTDLFWHELR
        IVH  ++LF+ RLE  +++   +     +D + +L  FL +K D+FWHELR
Subjt:  IVHLVTSLFVSRLEAPSSQLNPE-----DDFLLALHPFLYEKTDLFWHELR

AT2G47560.1 RING/U-box superfamily protein4.9e-0536.99Show/hide
Query:  ETCPICLREL-QDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINF-SSSSFRKEHLPTLNC
        E C +CL E  ++    +L  C H++ V+CI  W   + TCPLC A  +  F  I   SSSS      PT  C
Subjt:  ETCPICLREL-QDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINF-SSSSFRKEHLPTLNC

AT4G10940.1 RING/U-box protein3.4e-0644.9Show/hide
Query:  GETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFE
        GE C IC+  + D    VL  C H +C ECI  WST+   CPLC  +F+
Subjt:  GETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFE

AT5G12310.1 RING/U-box superfamily protein6.3e-0541.18Show/hide
Query:  GETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKR--TCPLCNAQFE
        G  C ICL  +     A++  C HAYCV CI +W++ K   TCP C   F+
Subjt:  GETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKR--TCPLCNAQFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGCAGGAGGAAATCATGAAGCCTGCAACCCGGGAACCGCGGCGAAAGCTCAACCGCGAAAACTGCGTATCTAAGGTAATTTCGCCGGCAATCTGTGGGGAAACCTGCCC
AATTTGCCTCAGAGAATTGCAGGATTGTACCGCCGCCGTGCTTACATCTTGTATCCACGCCTATTGCGTAGAATGCATTCGCAAATGGAGCACTTTGAAGCGGACTTGCC
CTCTCTGCAACGCTCAATTCGAGTCATGGTTCTCCAAAATCAATTTCTCATCATCAAGCTTCCGCAAAGAACATTTGCCAACCTTGAATTGTGTCGATAAGCTCAATGCT
GGAGTCGGATCCTCCCGGATTGACAGTCGCAGGCTTCTTCAGAGAGCGAGGAACGAATTAAATAGAGTTAGACGGTCGGAAATACCACTGACATGGCGGCGATCGTTTGG
ACGGCGAGGGTCAGAACCTGTACCAGCTGACGTTATTGCCCAGCGAAAACTTCAATGGCGAGCAAGCATATACAACCGACATATACAAGCTGTTCCATCTTCGGTCAGAT
GCGGTGCAGAACTGAACATATCAGGAAGTCATGGAGCTAAAGAAGCAATACTAGAGAAGATTAAACCATGGATTCAGAGGGAGTTGCAAGCCATCCTTGAGGACCCAGAT
CCAACTATAATTGTTCATCTGGTTACCTCACTATTTGTCTCAAGACTTGAAGCTCCTTCCTCGCAGCTTAATCCCGAGGATGACTTTCTTTTGGCGCTGCATCCCTTCCT
TTATGAAAAAACTGACTTGTTTTGGCATGAATTAAGGTACATGACTCAT
mRNA sequenceShow/hide mRNA sequence
GTGCAGGAGGAAATCATGAAGCCTGCAACCCGGGAACCGCGGCGAAAGCTCAACCGCGAAAACTGCGTATCTAAGGTAATTTCGCCGGCAATCTGTGGGGAAACCTGCCC
AATTTGCCTCAGAGAATTGCAGGATTGTACCGCCGCCGTGCTTACATCTTGTATCCACGCCTATTGCGTAGAATGCATTCGCAAATGGAGCACTTTGAAGCGGACTTGCC
CTCTCTGCAACGCTCAATTCGAGTCATGGTTCTCCAAAATCAATTTCTCATCATCAAGCTTCCGCAAAGAACATTTGCCAACCTTGAATTGTGTCGATAAGCTCAATGCT
GGAGTCGGATCCTCCCGGATTGACAGTCGCAGGCTTCTTCAGAGAGCGAGGAACGAATTAAATAGAGTTAGACGGTCGGAAATACCACTGACATGGCGGCGATCGTTTGG
ACGGCGAGGGTCAGAACCTGTACCAGCTGACGTTATTGCCCAGCGAAAACTTCAATGGCGAGCAAGCATATACAACCGACATATACAAGCTGTTCCATCTTCGGTCAGAT
GCGGTGCAGAACTGAACATATCAGGAAGTCATGGAGCTAAAGAAGCAATACTAGAGAAGATTAAACCATGGATTCAGAGGGAGTTGCAAGCCATCCTTGAGGACCCAGAT
CCAACTATAATTGTTCATCTGGTTACCTCACTATTTGTCTCAAGACTTGAAGCTCCTTCCTCGCAGCTTAATCCCGAGGATGACTTTCTTTTGGCGCTGCATCCCTTCCT
TTATGAAAAAACTGACTTGTTTTGGCATGAATTAAGGTACATGACTCAT
Protein sequenceShow/hide protein sequence
VQEEIMKPATREPRRKLNRENCVSKVISPAICGETCPICLRELQDCTAAVLTSCIHAYCVECIRKWSTLKRTCPLCNAQFESWFSKINFSSSSFRKEHLPTLNCVDKLNA
GVGSSRIDSRRLLQRARNELNRVRRSEIPLTWRRSFGRRGSEPVPADVIAQRKLQWRASIYNRHIQAVPSSVRCGAELNISGSHGAKEAILEKIKPWIQRELQAILEDPD
PTIIVHLVTSLFVSRLEAPSSQLNPEDDFLLALHPFLYEKTDLFWHELRYMTH