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MS001749 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001749
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhotosystem II protein D1
Genome locationscaffold571:637915..637989
RNA-Seq ExpressionMS001749
SyntenyMS001749
Gene Ontology termsGO:0009772 - photosynthetic electron transport in photosystem II (biological process)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsIPR000484 - Photosynthetic reaction centre, L/M
IPR036854 - Photosystem II protein D1/D2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
B1XM24 Photosystem II protein D1 16.3e-0588Show/hide
Query:  TFNFMIVLQAEHNIFMHLFHMLGVA
        TFNFMIV QAEHNI MH FHMLGVA
Subjt:  TFNFMIVLQAEHNIFMHLFHMLGVA
P07826 Photosystem II protein D1 14.8e-0584Show/hide
Query:  TFNFMIVLQAEHNIFMHLFHMLGVA
        TFNFM+VLQAEHN+ MH FHMLGVA
Subjt:  TFNFMIVLQAEHNIFMHLFHMLGVA
P31694 Photosystem II protein D1 26.3e-0588Show/hide
Query:  TFNFMIVLQAEHNIFMHLFHMLGVA
        TFNFMIV QAEHNI MH FHMLGVA
Subjt:  TFNFMIVLQAEHNIFMHLFHMLGVA
P46242 Photosystem II protein D1 16.3e-0588Show/hide
Query:  TFNFMIVLQAEHNIFMHLFHMLGVA
        TFNFMIV QAEHNI MH FHMLGVA
Subjt:  TFNFMIVLQAEHNIFMHLFHMLGVA
Q11A00 Photosystem II protein D1 16.3e-0588Show/hide
Query:  TFNFMIVLQAEHNIFMHLFHMLGVA
        TFNFMIV QAEHNI MH FHMLGVA
Subjt:  TFNFMIVLQAEHNIFMHLFHMLGVA
Arabidopsis top hitse value%identityAlignment
ATCG00020.1 photosystem II reaction center protein A4.4e-0688Show/hide
Query:  TFNFMIVLQAEHNIFMHLFHMLGVA
        TFNFMIV QAEHNI MH FHMLGVA
Subjt:  TFNFMIVLQAEHNIFMHLFHMLGVA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACTTTCAACTTTATGATTGTATTACAGGCTGAGCACAACATCTTTATGCACCTATTTCACATGTTAGGTGTAGCT
mRNA sequenceShow/hide mRNA sequence
ACTTTCAACTTTATGATTGTATTACAGGCTGAGCACAACATCTTTATGCACCTATTTCACATGTTAGGTGTAGCT
Protein sequenceShow/hide protein sequence
TFNFMIVLQAEHNIFMHLFHMLGVA