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MS001775 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001775
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranspos_assoc domain-containing protein
Genome locationscaffold343:439036..439176
RNA-Seq ExpressionMS001775
SyntenyMS001775
Gene Ontology termsNA
InterPro domainsIPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN78763.1 hypothetical protein VITISV_003315 [Vitis vinifera]3.5e-0644.68Show/hide
Query:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE
        HV +    RCPCK C+N+ ++S+Y++E +L+++ I+TTY +W+ HGE
Subjt:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE

RVW68394.1 hypothetical protein CK203_061680 [Vitis vinifera]5.4e-0746.81Show/hide
Query:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE
        HV + G  RCPCK C+N+ ++S+Y++E +L+++ I+TTY +W+ HGE
Subjt:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE

RVX11868.1 hypothetical protein CK203_009493 [Vitis vinifera]5.4e-0746.81Show/hide
Query:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE
        HV + G  RCPCK C+N+ ++S+Y++E +L+++ I+TTY +W+ HGE
Subjt:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE

XP_008455800.1 PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo]7.8e-0653.19Show/hide
Query:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE
        HV + G  RCPCK C+NS  ++L  +E +LF + IS+ YNKWV HGE
Subjt:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE

XP_024953970.1 uncharacterized protein LOC102619703 [Citrus sinensis]1.2e-0648.94Show/hide
Query:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE
        H+ EEG IRCPC+ C+N + +SL +++ +L+RH +S +Y +WV HGE
Subjt:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE

TrEMBL top hitse value%identityAlignment
A0A1S3C1V3 uncharacterized protein LOC1034958953.8e-0653.19Show/hide
Query:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE
        HV + G  RCPCK C+NS  ++L  +E +LF + IS+ YNKWV HGE
Subjt:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE

A0A438G8A3 Uncharacterized protein2.6e-0746.81Show/hide
Query:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE
        HV + G  RCPCK C+N+ ++S+Y++E +L+++ I+TTY +W+ HGE
Subjt:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE

A0A438JSF3 Uncharacterized protein2.6e-0746.81Show/hide
Query:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE
        HV + G  RCPCK C+N+ ++S+Y++E +L+++ I+TTY +W+ HGE
Subjt:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE

A0A5A7SP00 CACTA transposable element3.8e-0653.19Show/hide
Query:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE
        HV + G  RCPCK C+NS  ++L  +E +LF + IS+ YNKWV HGE
Subjt:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE

A5B8Q2 Uncharacterized protein1.7e-0644.68Show/hide
Query:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE
        HV +    RCPCK C+N+ ++S+Y++E +L+++ I+TTY +W+ HGE
Subjt:  HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATGTTAAAGAAGAAGGTATGATTAGATGTCCATGTAAAGTTTGTCGCAACAGTCAATTTCGTTCCCTTTATGAAATGGAATGCTATTTGTTTAGACATTGTATC
TCTACAACATACAATAAGTGGGTATGTCATGGAGAA
mRNA sequenceShow/hide mRNA sequence
CATGTTAAAGAAGAAGGTATGATTAGATGTCCATGTAAAGTTTGTCGCAACAGTCAATTTCGTTCCCTTTATGAAATGGAATGCTATTTGTTTAGACATTGTATC
TCTACAACATACAATAAGTGGGTATGTCATGGAGAA
Protein sequenceShow/hide protein sequence
HVKEEGMIRCPCKVCRNSQFRSLYEMECYLFRHCISTTYNKWVCHGE