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MS001793 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001793
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycosyl hydrolase family 38 protein
Genome locationscaffold30:110139..110228
RNA-Seq ExpressionMS001793
SyntenyMS001793
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
InterPro domainsIPR011013 - Galactose mutarotase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26720.1 Glycosyl hydrolase family 38 protein8.5e-0450Show/hide
Query:  KEATTQIASTIQNNRKFHTDSNGRDFVQRV
        KE  T++ +T++ N  F+TDSNGRDF++R+
Subjt:  KEATTQIASTIQNNRKFHTDSNGRDFVQRV
AT3G26720.2 Glycosyl hydrolase family 38 protein8.5e-0450Show/hide
Query:  KEATTQIASTIQNNRKFHTDSNGRDFVQRV
        KE  T++ +T++ N  F+TDSNGRDF++R+
Subjt:  KEATTQIASTIQNNRKFHTDSNGRDFVQRV
AT5G13980.1 Glycosyl hydrolase family 38 protein1.7e-0450Show/hide
Query:  KEATTQIASTIQNNRKFHTDSNGRDFVQRV
        KE  TQI+S++++N+ F+TDS+GRD+++R+
Subjt:  KEATTQIASTIQNNRKFHTDSNGRDFVQRV
AT5G13980.2 Glycosyl hydrolase family 38 protein1.7e-0450Show/hide
Query:  KEATTQIASTIQNNRKFHTDSNGRDFVQRV
        KE  TQI+S++++N+ F+TDS+GRD+++R+
Subjt:  KEATTQIASTIQNNRKFHTDSNGRDFVQRV
AT5G13980.3 Glycosyl hydrolase family 38 protein1.7e-0450Show/hide
Query:  KEATTQIASTIQNNRKFHTDSNGRDFVQRV
        KE  TQI+S++++N+ F+TDS+GRD+++R+
Subjt:  KEATTQIASTIQNNRKFHTDSNGRDFVQRV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGAGGCCACAACTCAGATTGCAAGTACAATTCAAAATAACAGAAAGTTTCATACTGATTCTAATGGTCGTGATTTCGTCCAAAGGGTA
mRNA sequenceShow/hide mRNA sequence
AAAGAGGCCACAACTCAGATTGCAAGTACAATTCAAAATAACAGAAAGTTTCATACTGATTCTAATGGTCGTGATTTCGTCCAAAGGGTA
Protein sequenceShow/hide protein sequence
KEATTQIASTIQNNRKFHTDSNGRDFVQRV