CuGenDBv2

Gene ID	MS001800
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Acyl carrier protein
Genome location	scaffold30:145961..146280
RNA-Seq Expression	MS001800
Synteny	MS001800
Gene Ontology terms	GO:0006633 - fatty acid biosynthetic process (biological process) GO:0009416 - response to light stimulus (biological process) GO:0009507 - chloroplast (cellular component) GO:0000036 - acyl carrier activity (molecular function) GO:0031177 - phosphopantetheine binding (molecular function)
InterPro domains	IPR003231 - Acyl carrier protein (ACP) IPR006162 - Phosphopantetheine attachment site IPR009081 - Phosphopantetheine binding ACP domain IPR020806 - Polyketide synthase, phosphopantetheine-binding domain IPR036736 - ACP-like superfamily IPR044813 - Acyl carrier protein, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008464386.1 PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo]

4.4e-28

91.14

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV
        AKPETVDKVCS+VRKQLALP  SELTPESKF ALGADSLD VEIIM LEEEF INIEEDNAQNITTVQEAADLIEDLVV
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV

XP_022134996.1 acyl carrier protein 4, chloroplastic-like [Momordica charantia]

2.4e-34

100

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVVNPNL
        AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVVNPNL
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVVNPNL

XP_022987144.1 acyl carrier protein 4, chloroplastic-like [Cucurbita maxima]

4.4e-28

91.14

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV
        AKPETVDKVCS+VRKQLALP  SELTPESKF ALGADSLD VEIIM LEEEF INIEEDNAQNITTVQEAADLIEDLVV
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV

XP_023516582.1 acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo]

4.4e-28

91.14

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV
        AKPETVDKVCS+VRKQLALP  SELTPESKF ALGADSLD VEIIM LEEEF INIEEDNAQNITTVQEAADLIEDLVV
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV

XP_038879812.1 acyl carrier protein 4, chloroplastic-like [Benincasa hispida]

3.4e-28

91.14

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV
        AKPETVDKVCS+VRKQLALP  SELTPESKF ALGADSLD VEIIM LEEEF INIEEDNAQNITTVQEAADLIEDLVV
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV

TrEMBL top hits

e value

%identity

Alignment

A0A5D3BIB6 Acyl carrier protein

2.1e-28

91.14

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV
        AKPETVDKVCS+VRKQLALP  SELTPESKF ALGADSLD VEIIM LEEEF INIEEDNAQNITTVQEAADLIEDLVV
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV

A0A6J1BZC7 Acyl carrier protein

1.2e-34

100

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVVNPNL
        AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVVNPNL
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVVNPNL

A0A6J1E6C1 Acyl carrier protein

2.1e-28

91.14

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV
        AKPETVDKVCS+VRKQLALP  SELTPESKF ALGADSLD VEIIM LEEEF INIEEDNAQNITTVQEAADLIEDLVV
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV

A0A6J1JI20 Acyl carrier protein

2.1e-28

91.14

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV
        AKPETVDKVCS+VRKQLALP  SELTPESKF ALGADSLD VEIIM LEEEF INIEEDNAQNITTVQEAADLIEDLVV
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV

E5GBM2 Acyl carrier protein

2.1e-28

91.14

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV
        AKPETVDKVCS+VRKQLALP  SELTPESKF ALGADSLD VEIIM LEEEF INIEEDNAQNITTVQEAADLIEDLVV
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV

SwissProt top hits

e value

%identity

Alignment

P52411 Acyl carrier protein 1, chloroplastic

3.2e-21

69.23

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV
        AKPETV KVC +V+KQLALP +SE+   SKF ALGADSLD VEI+M LEEEF I++EE++AQ+I TVQ+AADLIE L+
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV

P52412 Acyl carrier protein 2, chloroplastic

2.4e-21

67.95

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV
        AKPETV KVC++V+KQLALP +S+++  SKF ALGADSLD VEI+M LEEEF I++EE++AQ+I TVQ+AADLIE L+
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV

P52414 Acyl carrier protein 4, chloroplastic

4.2e-21

69.23

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV
        AKPETV KVC +V+KQLALP +SE+   SKF ALGADSLD VEI+M LEEEF I++EE++AQ+I TVQ+AADLIE L+
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV

P93092 Acyl carrier protein 1, chloroplastic

3.4e-23

70.51

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV
        AKPETV+KVC++V+KQLALP +S +T ESKF  LGADSLD VEI+M LEEEF IN+EE++AQ+I TVQ+AADLIE L+
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV

Q9SW21 Acyl carrier protein 4, chloroplastic

6.4e-22

71.79

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV
        AK ETV KV  +V++QLAL A+  LT ESKF ALGADSLD VEI+MALEE+F+I++EE +AQNITT+QEAADLIEDLV
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV

Arabidopsis top hits

e value

%identity

Alignment

AT1G54580.1 acyl carrier protein 2

9.5e-21

65.38

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV
        AKPETVDKVC+VVRKQL+L    E+T  +KF ALGADSLD VEI+M LEEEF I + E+ AQ+I TV++AA LIE+L+
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV

AT1G54630.1 acyl carrier protein 3

7.3e-21

64.56

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV
        AKPETVDKVC+VVRKQL+L    E+T  +KF ALGADSLD VEI+M LEEEF I + E+ AQ+I TV++AA LIE+L++
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVV

AT3G05020.1 acyl carrier protein 1

1.3e-17

55.13

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV
        AK ET++KV ++V+KQL+L  + ++  E+KF  LGADSLD VEI+M LEEEF+I + E+ AQ I TV++AA+LIE+L+
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV

AT4G25050.1 acyl carrier protein 4

4.6e-23

71.79

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV
        AK ETV KV  +V++QLAL A+  LT ESKF ALGADSLD VEI+MALEE+F+I++EE +AQNITT+QEAADLIEDLV
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV

AT4G25050.2 acyl carrier protein 4

2.1e-20

62.22

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Query:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDL------------VEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV
        AK ETV KV  +V++QLAL A+  LT ESKF ALGADSLD             VEI+MALEE+F+I++EE +AQNITT+QEAADLIEDLV
Subjt:  AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDL------------VEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLV

Sequences

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CDS sequence

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GCAAAACCAGAGACAGTTGATAAAGTGTGTTCAGTTGTGAGGAAACAATTGGCCTTGCCTGCCGAATCAGAGCTCACCCCTGAATCCAAGTTCTTAGCTCTGGGTGCCGA
CTCCCTCGACCTTGTGGAGATAATTATGGCCTTAGAGGAAGAATTTGACATCAATATCGAAGAGGATAACGCTCAGAACATAACCACCGTTCAAGAAGCTGCAGATTTGA
TCGAGGACCTCGTTGTTAACCCCAATCTT

mRNA sequence

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Protein sequence

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AKPETVDKVCSVVRKQLALPAESELTPESKFLALGADSLDLVEIIMALEEEFDINIEEDNAQNITTVQEAADLIEDLVVNPNL

MS001800 (gene) of Bitter gourd (TR) v1 genome