; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001807 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001807
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE2 ubiquitin-conjugating enzyme
Genome locationscaffold30:171766..174139
RNA-Seq ExpressionMS001807
SyntenyMS001807
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016874 - ligase activity (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR009060 - UBA-like superfamily
IPR015940 - Ubiquitin-associated domain
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like
IPR023313 - Ubiquitin-conjugating enzyme, active site
IPR041974 - Ubiquitin carrier protein 27, UBA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464378.1 PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis melo]2.8e-10296.91Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        MIDFARVQKELQECTKDIEASGIRVTPK+D+L+HLLGTIPGPI+TPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
        TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKL+EMGFPEAQVRSSLEAVG DENLALEKLCSG
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG

XP_022135200.1 ubiquitin-conjugating enzyme E2 27 [Momordica charantia]3.6e-105100Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
        TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG

XP_022921627.1 ubiquitin-conjugating enzyme E2 27 [Cucurbita moschata]2.0e-10397.94Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        M+DFARVQKELQECTKDIEASGIRVTPKADNL+HLLGTIPGP+ATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
        TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVG DENLALEKLCSG
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG

XP_022988308.1 ubiquitin-conjugating enzyme E2 27 [Cucurbita maxima]5.7e-10397.42Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        M+DFARVQKELQEC+KDIEASGIRVTPKADNL+HLLGTIPGP+ATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
        TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVG DENLALEKLCSG
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG

XP_023515392.1 ubiquitin-conjugating enzyme E2 27 [Cucurbita pepo subsp. pepo]3.4e-10397.42Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        M+DFARVQKELQECTKDIEASGIRVTPKADNL+HL+GTIPGP+ATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
        TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVG DENLALEKLCSG
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG

TrEMBL top hitse value%identityAlignment
A0A1S3CLG3 E2 ubiquitin-conjugating enzyme1.4e-10296.91Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        MIDFARVQKELQECTKDIEASGIRVTPK+D+L+HLLGTIPGPI+TPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
        TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKL+EMGFPEAQVRSSLEAVG DENLALEKLCSG
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG

A0A5A7URI8 E2 ubiquitin-conjugating enzyme1.4e-10296.91Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        MIDFARVQKELQECTKDIEASGIRVTPK+D+L+HLLGTIPGPI+TPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
        TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKL+EMGFPEAQVRSSLEAVG DENLALEKLCSG
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG

A0A6J1C0H8 E2 ubiquitin-conjugating enzyme1.7e-105100Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
        TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG

A0A6J1E113 E2 ubiquitin-conjugating enzyme9.6e-10497.94Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        M+DFARVQKELQECTKDIEASGIRVTPKADNL+HLLGTIPGP+ATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
        TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVG DENLALEKLCSG
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG

A0A6J1JLX8 E2 ubiquitin-conjugating enzyme2.8e-10397.42Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        M+DFARVQKELQEC+KDIEASGIRVTPKADNL+HLLGTIPGP+ATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG
        TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVG DENLALEKLCSG
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG

SwissProt top hitse value%identityAlignment
P52484 Probable ubiquitin-conjugating enzyme E2 212.0e-4552.02Show/hide
Query:  ARVQKELQEC--TKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTL
        ARV ++ +E     DI  +GI V  K +NL  + G I GP  TPY GGTF+I + +P+ YPFEPPK +F T++WHPNISSQ+G ICLDILKD+W+ +LTL
Subjt:  ARVQKELQEC--TKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTL

Query:  KTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFA---KTSSLGVEEKVQKLVEMGFPEAQ
        +T LLS+QA+L +P+P DPQDAVVA+Q++ +Y  F  TA YWT  FA   K        KV +L+EMG  E +
Subjt:  KTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFA---KTSSLGVEEKVQKLVEMGFPEAQ

P61085 Ubiquitin-conjugating enzyme E2 K2.2e-4449.48Show/hide
Query:  RVQKELQECTKDIEAS--GIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLK
        R+++E +E  K  E S   I+V    +N   L G I GP  TPYEGG +Q++I +P+ YPF PPK++F TK+WHPNISS +GAICLDILKDQW+ A+TL+
Subjt:  RVQKELQECTKDIEAS--GIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLK

Query:  TALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCS
        T LLS+QALL+A +PDDPQDAVVA QY ++ + F  TAR W   +  A  SS    +K++ L  MGF    V  +L +   D   A E L S
Subjt:  TALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCS

P61086 Ubiquitin-conjugating enzyme E2 K2.2e-4449.48Show/hide
Query:  RVQKELQECTKDIEAS--GIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLK
        R+++E +E  K  E S   I+V    +N   L G I GP  TPYEGG +Q++I +P+ YPF PPK++F TK+WHPNISS +GAICLDILKDQW+ A+TL+
Subjt:  RVQKELQECTKDIEAS--GIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLK

Query:  TALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCS
        T LLS+QALL+A +PDDPQDAVVA QY ++ + F  TAR W   +  A  SS    +K++ L  MGF    V  +L +   D   A E L S
Subjt:  TALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCS

P61087 Ubiquitin-conjugating enzyme E2 K2.2e-4449.48Show/hide
Query:  RVQKELQECTKDIEAS--GIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLK
        R+++E +E  K  E S   I+V    +N   L G I GP  TPYEGG +Q++I +P+ YPF PPK++F TK+WHPNISS +GAICLDILKDQW+ A+TL+
Subjt:  RVQKELQECTKDIEAS--GIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLK

Query:  TALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCS
        T LLS+QALL+A +PDDPQDAVVA QY ++ + F  TAR W   +  A  SS    +K++ L  MGF    V  +L +   D   A E L S
Subjt:  TALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCS

Q9FI61 Ubiquitin-conjugating enzyme E2 272.1e-8779.79Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        MIDF+R+QKELQ+C ++ ++SGIRV PK+DNL  L GTIPGPI TPYEGGTFQIDIT+PDGYPFEPPKMQF+TKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCS
        TLKTAL+S+QALLSAP+P DPQDAVVA+QY+++YQ F  TARYWTETFAK SSL  EEKV++LVEMGF +AQVRS++E+ GGDENLALEKLCS
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCS

Arabidopsis top hitse value%identityAlignment
AT3G08690.1 ubiquitin-conjugating enzyme 111.3e-3348.61Show/hide
Query:  RVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTA
        R+ KEL++  KD   S     P A+++ H   TI GP  +PY GG F + I  P  YPF+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+   
Subjt:  RVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTA

Query:  LLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFA
        LLS+ +LL+ P PDDP    +A  Y  D   +  TAR WT+ +A
Subjt:  LLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFA

AT3G08690.2 ubiquitin-conjugating enzyme 111.3e-3348.61Show/hide
Query:  RVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTA
        R+ KEL++  KD   S     P A+++ H   TI GP  +PY GG F + I  P  YPF+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+   
Subjt:  RVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTA

Query:  LLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFA
        LLS+ +LL+ P PDDP    +A  Y  D   +  TAR WT+ +A
Subjt:  LLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFA

AT5G41700.4 ubiquitin conjugating enzyme 81.2e-3449.31Show/hide
Query:  RVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTA
        R+ KEL++  KD   S I   P A+++ H   TI GP  +PY GG F + I  P  YPF+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+   
Subjt:  RVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTA

Query:  LLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFA
        LLS+ +LL+ P PDDP    +A  Y  D   +  TAR WT+ +A
Subjt:  LLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFA

AT5G50870.1 ubiquitin-conjugating enzyme 271.5e-8879.79Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        MIDF+R+QKELQ+C ++ ++SGIRV PK+DNL  L GTIPGPI TPYEGGTFQIDIT+PDGYPFEPPKMQF+TKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCS
        TLKTAL+S+QALLSAP+P DPQDAVVA+QY+++YQ F  TARYWTETFAK SSL  EEKV++LVEMGF +AQVRS++E+ GGDENLALEKLCS
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCS

AT5G50870.2 ubiquitin-conjugating enzyme 275.2e-8675.49Show/hide
Query:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL
        MIDF+R+QKELQ+C ++ ++SGIRV PK+DNL  L GTIPGPI TPYEGGTFQIDIT+PDGYPFEPPKMQF+TKVWHPNISSQSGAICLDILKDQWSPAL
Subjt:  MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPAL

Query:  TLKTALLSVQALLSAPQPDDPQDAVVAQQ-----------YLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALE
        TLKTAL+S+QALLSAP+P DPQDAVVA+Q           Y+++YQ F  TARYWTETFAK SSL  EEKV++LVEMGF +AQVRS++E+ GGDENLALE
Subjt:  TLKTALLSVQALLSAPQPDDPQDAVVAQQ-----------YLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALE

Query:  KLCS
        KLCS
Subjt:  KLCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGACTTCGCTCGCGTCCAAAAGGAGCTCCAGGAATGCACTAAAGACATCGAGGCCTCCGGTATTCGAGTCACCCCCAAAGCTGATAATCTTGCCCATTTGCTCGG
CACCATTCCCGGCCCTATCGCTACTCCTTATGAAGGTGGCACCTTCCAAATTGACATCACATTGCCAGATGGGTATCCATTTGAGCCTCCCAAAATGCAGTTTGCTACAA
AAGTCTGGCACCCTAATATCAGTAGTCAAAGTGGTGCAATATGCCTTGACATATTGAAAGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTTTCTGTGCAG
GCATTGCTTTCTGCTCCTCAACCTGATGATCCTCAAGATGCTGTCGTGGCACAACAGTATCTTAGAGACTACCAGACTTTCGCTGGCACAGCTCGGTATTGGACAGAAAC
TTTTGCCAAAACGTCATCTCTTGGGGTGGAAGAAAAGGTGCAGAAACTTGTCGAGATGGGATTTCCGGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGTGGGGATG
AAAATTTGGCTCTGGAAAAGCTCTGTTCCGGC
mRNA sequenceShow/hide mRNA sequence
ATGATAGACTTCGCTCGCGTCCAAAAGGAGCTCCAGGAATGCACTAAAGACATCGAGGCCTCCGGTATTCGAGTCACCCCCAAAGCTGATAATCTTGCCCATTTGCTCGG
CACCATTCCCGGCCCTATCGCTACTCCTTATGAAGGTGGCACCTTCCAAATTGACATCACATTGCCAGATGGGTATCCATTTGAGCCTCCCAAAATGCAGTTTGCTACAA
AAGTCTGGCACCCTAATATCAGTAGTCAAAGTGGTGCAATATGCCTTGACATATTGAAAGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTTTCTGTGCAG
GCATTGCTTTCTGCTCCTCAACCTGATGATCCTCAAGATGCTGTCGTGGCACAACAGTATCTTAGAGACTACCAGACTTTCGCTGGCACAGCTCGGTATTGGACAGAAAC
TTTTGCCAAAACGTCATCTCTTGGGGTGGAAGAAAAGGTGCAGAAACTTGTCGAGATGGGATTTCCGGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGTGGGGATG
AAAATTTGGCTCTGGAAAAGCTCTGTTCCGGC
Protein sequenceShow/hide protein sequence
MIDFARVQKELQECTKDIEASGIRVTPKADNLAHLLGTIPGPIATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQ
ALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGGDENLALEKLCSG