; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001817 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001817
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMembrane-anchored ubiquitin-fold protein
Genome locationscaffold30:215806..216561
RNA-Seq ExpressionMS001817
SyntenyMS001817
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR017000 - Membrane-anchored ubiquitin-fold protein
IPR029071 - Ubiquitin-like domain superfamily
IPR039540 - UBL3-like, ubiquitin domain
IPR040015 - UBL3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057753.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis melo var. makuwa]4.8e-5199.03Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

Query:  GDF
        GDF
Subjt:  GDF

XP_008464397.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo]5.9e-4999Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

XP_022134657.1 membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia]1.3e-4899Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIV DWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

XP_022932445.1 membrane-anchored ubiquitin-fold protein 3-like isoform X2 [Cucurbita moschata]6.5e-4895Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPEDDLIDIKFRLYDGSD+GPFRYSSAST+DVLKQRIVSDWPKGKT+TPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV IMHVVVQPS+AKAKT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

XP_031745197.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus]7.7e-4998Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASE+KLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

TrEMBL top hitse value%identityAlignment
A0A0A0LNH9 Membrane-anchored ubiquitin-fold protein3.7e-4998Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASE+KLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

A0A1S3CMX7 Membrane-anchored ubiquitin-fold protein2.8e-4999Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

A0A5A7UPG7 Membrane-anchored ubiquitin-fold protein2.3e-5199.03Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

Query:  GDF
        GDF
Subjt:  GDF

A0A6J1EXB1 Membrane-anchored ubiquitin-fold protein2.8e-4999Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

A0A6J1IG02 Membrane-anchored ubiquitin-fold protein2.8e-4999Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

SwissProt top hitse value%identityAlignment
Q6Z8K4 Membrane-anchored ubiquitin-fold protein 33.4e-2351.72Show/hide
Query:  IDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQP
        I++KFRL+DG+DIGP +Y  ++T+  LK+ I++ WP+ K ITPK  +++KLI++G+ILENN+T+ + ++P GE  GGV  MHVVV+P
Subjt:  IDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQP

Q7XRU4 Membrane-anchored ubiquitin-fold protein 43.5e-2858.76Show/hide
Query:  DDLIDIKFRLYDGSDIGPFRYSS-ASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAK
        D+ +++KFRL+DGSDIGP R ++ A+T+  LK R+V+DWPK KTI PK A++VKLIS GKILEN+K + QC+ PFG+       MHVVVQPS AK+K
Subjt:  DDLIDIKFRLYDGSDIGPFRYSS-ASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAK

Q8LCS8 Membrane-anchored ubiquitin-fold protein 22.3e-2452.69Show/hide
Query:  DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAK
        D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   +VKLIS+G+ILENNKTVG C+ P G F+G VT MHV++Q  + +
Subjt:  DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAK

Q9LSD8 Membrane-anchored ubiquitin-fold protein 41.8e-3262.63Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAK
        MPE+DL+++KFRLYDGSD+GPF+YS  +T+ +LK+RIVS+WPK K I PK+AS++KLI++GKILEN KTV QCK PF +    V  MHVVVQ S  KA+
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAK

Q9SW27 Membrane-anchored ubiquitin-fold protein 31.3e-4380Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPE++ IDIKFRLYDGSDIGPFRYS+AST+D LKQR+VSDWPKGKT+ PK  +EVKLISSGKILENNKTVGQCK PFG+  GGV +MHVVVQPS+AK+KT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

Arabidopsis top hitse value%identityAlignment
AT1G77870.1 membrane-anchored ubiquitin-fold protein 5 precursor3.1e-2450.5Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCK--LPFGEFTGGVTIMHVVVQPSIAKA
        M ++DLI++KFRL DG+DIGP +YS   T+  LK++I++ WPK K   PK  +EVKLI+ GKILENNKT+ + +  +  GE  G VT MHVV++P + + 
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCK--LPFGEFTGGVTIMHVVVQPSIAKA

Query:  K
        K
Subjt:  K

AT3G26980.1 membrane-anchored ubiquitin-fold protein 4 precursor1.3e-3362.63Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAK
        MPE+DL+++KFRLYDGSD+GPF+YS  +T+ +LK+RIVS+WPK K I PK+AS++KLI++GKILEN KTV QCK PF +    V  MHVVVQ S  KA+
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAK

AT4G24990.1 Ubiquitin family protein9.3e-4580Show/hide
Query:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
        MPE++ IDIKFRLYDGSDIGPFRYS+AST+D LKQR+VSDWPKGKT+ PK  +EVKLISSGKILENNKTVGQCK PFG+  GGV +MHVVVQPS+AK+KT
Subjt:  MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT

AT5G15460.1 membrane-anchored ubiquitin-fold protein 21.7e-2552.69Show/hide
Query:  DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAK
        D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   +VKLIS+G+ILENNKTVG C+ P G F+G VT MHV++Q  + +
Subjt:  DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAK

AT5G15460.2 membrane-anchored ubiquitin-fold protein 21.7e-2552.69Show/hide
Query:  DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAK
        D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   +VKLIS+G+ILENNKTVG C+ P G F+G VT MHV++Q  + +
Subjt:  DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGAGGACGATTTAATTGACATTAAGTTCAGGCTCTACGATGGCTCTGATATTGGACCCTTTCGATACTCCTCGGCATCCACAATAGATGTGCTTAAGCAGAGAAT
AGTGTCCGATTGGCCTAAAGGCAAAACAATCACTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCTGGTAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTA
AATTACCTTTTGGTGAGTTCACGGGAGGAGTCACTATAATGCACGTTGTTGTACAGCCATCCATCGCAAAAGCTAAAACAGGTGATTTCCTTTCACATTTT
mRNA sequenceShow/hide mRNA sequence
ATGCCGGAGGACGATTTAATTGACATTAAGTTCAGGCTCTACGATGGCTCTGATATTGGACCCTTTCGATACTCCTCGGCATCCACAATAGATGTGCTTAAGCAGAGAAT
AGTGTCCGATTGGCCTAAAGGCAAAACAATCACTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCTGGTAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTA
AATTACCTTTTGGTGAGTTCACGGGAGGAGTCACTATAATGCACGTTGTTGTACAGCCATCCATCGCAAAAGCTAAAACAGGTGATTTCCTTTCACATTTT
Protein sequenceShow/hide protein sequence
MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKTGDFLSHF